PDB: 2682 件ウェブページステータス検索Chemie searchBIRD

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8IPX	human nuclear pre-60S ribosomal particle - State C' 分子名称: 28S rRNA, 5.8S rRNA, 5S RNA, ... 著者 Zhang, Y, Gao, N. 登録日 2023-03-15 公開日 2023-08-09 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles. Cell Res., 33, 2023
6GC4	50S ribosomal subunit assembly intermediate state 3 分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Nikolay, R, Hilal, T, Qin, B, Loerke, J, Buerger, J, Mielke, T, Spahn, C.M.T. 登録日 2018-04-17 公開日 2018-07-04 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural Visualization of the Formation and Activation of the 50S Ribosomal Subunit during In Vitro Reconstitution. Mol. Cell, 70, 2018
5GAF	RNC in complex with SRP 分子名称: 1A9L SS, 23S ribosomal RNA, 50S ribosomal protein L10, ... 著者 Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N. 登録日 2015-11-25 公開日 2016-02-03 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon Nat Commun, 7, 2016
7ZUW	Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R. 登録日 2022-05-13 公開日 2023-02-22 最終更新日 2023-03-01 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural basis for clearing of ribosome collisions by the RQT complex. Nat Commun, 14, 2023
6QC5	Ovine respiratory complex I FRC closed class 1 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Acyl carrier protein, ... 著者 Letts, J.A, Sazanov, L.A. 登録日 2018-12-26 公開日 2019-08-21 最終更新日 2019-10-02 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk. Mol.Cell, 75, 2019
6Q98	Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rae, C.D. 登録日 2018-12-17 公開日 2019-02-27 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 How a circularized tmRNA moves through the ribosome. Science, 363, 2019
6GC6	50S ribosomal subunit assembly intermediate state 2 分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Nikolay, R, Hilal, T, Qin, B, Loerke, J, Buerger, J, Mielke, T, Spahn, C.M.T. 登録日 2018-04-17 公開日 2018-07-04 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural Visualization of the Formation and Activation of the 50S Ribosomal Subunit during In Vitro Reconstitution. Mol. Cell, 70, 2018
6WDH	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Loveland, A.B, Demo, G, Korostelev, A.A. 登録日 2020-03-31 公開日 2020-07-01 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6GCS	Cryo-EM structure of respiratory complex I from Yarrowia lipolytica 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 24-KDA SUBUNIT (NUHM), 30-KDA PROTEIN (NUGM), ... 著者 Parey, K, Vonck, J. 登録日 2018-04-19 公開日 2018-10-10 最終更新日 2021-06-02 実験手法 ELECTRON MICROSCOPY (4.32 Å) 主引用文献 Cryo-EM structure of respiratory complex I at work. Elife, 7, 2018
7WFG	Subcomplexes A and E in NDH complex from Arabidopsis 分子名称: IRON/SULFUR CLUSTER, NAD(P)H-quinone oxidoreductase subunit H, chloroplastic, ... 著者 Pan, X.W, Li, M. 登録日 2021-12-26 公開日 2022-03-16 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (4.33 Å) 主引用文献 Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana. Mol Plant, 15, 2022
5LC5	Structure of mammalian respiratory Complex I, class2 分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Vinothkumar, K.R, Zhu, J, Hirst, J. 登録日 2016-06-19 公開日 2016-09-07 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (4.35 Å) 主引用文献 Structure of mammalian respiratory complex I. Nature, 536, 2016
7NRD	Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA 分子名称: 25S rRNA (3184-MER), 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... 著者 Pochopien, A.A, Beckert, B, Wilson, D.N. 登録日 2021-03-03 公開日 2021-04-14 実験手法 ELECTRON MICROSCOPY (4.36 Å) 主引用文献 Structure of Gcn1 bound to stalled and colliding 80S ribosomes. Proc.Natl.Acad.Sci.USA, 118, 2021
7OHS	Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae 分子名称: 25S rRNA, 5.8S rRNA, 60S ribosomal protein L13-A, ... 著者 Milkereit, P, Poell, G. 登録日 2021-05-11 公開日 2021-11-03 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (4.38 Å) 主引用文献 Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors. Plos One, 16, 2021
7AFT	Cryo-EM structure of the signal sequence-engaged post-translational Sec translocon 分子名称: Mating factor alpha-1,Mating factor alpha-1, Protein translocation protein SEC63, Protein transport protein SBH1, ... 著者 Weng, T.-H, Beatrix, B, Berninghausen, O, Becker, T, Cheng, J, Beckmann, R. 登録日 2020-09-20 公開日 2020-12-02 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Architecture of the active post-translational Sec translocon. Embo J., 40, 2021
7KAT	Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore ring and Sec63 FN3 double mutant, class without Sec62 分子名称: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... 著者 Itskanov, S, Park, E. 登録日 2020-10-01 公開日 2021-01-06 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
6PPK	RbgA+45SRbgA complex 分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Ortega, J. 登録日 2019-07-07 公開日 2019-09-18 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structural consequences of the interaction of RbgA with a 50S ribosomal subunit assembly intermediate. Nucleic Acids Res., 47, 2019
6GXP	Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Graf, M, Huter, P, Maracci, C, Peterek, M, Rodnina, M.V, Wilson, D.N. 登録日 2018-06-27 公開日 2018-08-15 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Visualization of translation termination intermediates trapped by the Apidaecin 137 peptide during RF3-mediated recycling of RF1. Nat Commun, 9, 2018
6GQ1	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin) 分子名称: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... 著者 Pellegrino, S, Demeshkina, N, Mancera-Martinez, E, Melnikov, S, Simonetti, A, Myasnikov, A, Yusupov, M, Yusupova, G, Hashem, Y. 登録日 2018-06-07 公開日 2018-07-11 最終更新日 2018-08-08 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance. J. Mol. Biol., 430, 2018
4V5Y	Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Borovinskaya, M.A, Pai, R.D, Zhang, W, Schuwirth, B.-S, Holton, J.M, Hirokawa, G, Kaji, H, Kaji, A, Cate, J.H.D. 登録日 2007-06-19 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (4.45 Å) 主引用文献 Structural basis for aminoglycoside inhibition of bacterial ribosome recycling. Nat.Struct.Mol.Biol., 14, 2007
8HKY	Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Wang, Y.H, Zhou, J. 登録日 2022-11-28 公開日 2023-08-30 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.45 Å) 主引用文献 Cryo-electron microscopy structure and translocation mechanism of the crenarchaeal ribosome. Nucleic Acids Res., 51, 2023
7QGH	Structure of the E. coli disome - collided 70S ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Kratzat, H, Buschauer, R, Berninghausen, O, Beckmann, R. 登録日 2021-12-08 公開日 2022-03-16 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (4.48 Å) 主引用文献 Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria. Nature, 603, 2022
6IP6	Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii) 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T. 登録日 2018-11-02 公開日 2019-05-29 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 HCV IRES Captures an Actively Translating 80S Ribosome. Mol.Cell, 74, 2019
3M9S	Crystal structure of respiratory complex I from Thermus thermophilus 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... 著者 Efremov, R.G, Baradaran, R, Sazanov, L.A. 登録日 2010-03-22 公開日 2010-05-26 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 The architecture of respiratory complex I Nature, 465, 2010
8PVA	Structure of bacterial ribosome determined by cryoEM at 100 keV 分子名称: 16S rRNA, 23S rRNA, 50S ribosomal protein L14, ... 著者 McMullan, G, Naydenova, K, Mihaylov, D, Peet, M.J, Wilson, H, Yamashita, K, Dickerson, J.L, Chen, S, Cannone, G, Lee, Y, Hutchings, K.A, Gittins, O, Sobhy, M, Wells, T, El-Gomati, M.M, Dalby, J, Meffert, M, Schulze-Briese, C, Henderson, R, Russo, C.J. 登録日 2023-07-17 公開日 2023-11-29 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structure determination by cryoEM at 100 keV. Proc.Natl.Acad.Sci.USA, 120, 2023
5ADY	Cryo-EM structures of the 50S ribosome subunit bound with HflX 分子名称: 23S RRNA, 50S RIBOSOMAL PROTEIN L1, 50S RIBOSOMAL PROTEIN L10, ... 著者 Zhang, Y, Mandava, C.S, Cao, W, Li, X, Zhang, D, Li, N, Zhang, Y, Zhang, X, Qin, Y, Mi, K, Lei, J, Sanyal, S, Gao, N. 登録日 2015-08-25 公開日 2015-10-14 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Hflx is a Ribosome Splitting Factor Rescuing Stalled Ribosomes Under Stress Conditions Nat.Struct.Mol.Biol., 22, 2015

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