Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4EY8
DownloadVisualize
BU of 4ey8 by Molmil
Crystal structure of recombinant human acetylcholinesterase in complex with fasciculin-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, Fasciculin-2, ...
著者Cheung, J, Rudolph, M, Burshteyn, F, Cassidy, M, Gary, E, Love, J, Height, J, Franklin, M.
登録日2012-05-01
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5958 Å)
主引用文献Structures of human acetylcholinesterase in complex with pharmacologically important ligands.
J.Med.Chem., 55, 2012
8R5B
DownloadVisualize
BU of 8r5b by Molmil
Crystal structure of human TRIM7 PRYSPRY domain bound to (3-phenoxybenzoyl)-L-glutamine
分子名称: (2~{S})-5-azanyl-5-oxidanylidene-2-[(3-phenoxyphenyl)carbonylamino]pentanoic acid, ACETIC ACID, E3 ubiquitin-protein ligase TRIM7
著者Munoz Sosa, C.J, Kraemer, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2023-11-16
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of human TRIM7 PRYSPRY domain bound to (3-phenoxybenzoyl)-L-glutamine
To Be Published
8R6Q
DownloadVisualize
BU of 8r6q by Molmil
Co-crystal structure of PD-L1 with low molecular weight inhibitor
分子名称: (3~{R})-1-[[4-[2-chloranyl-3-(2,3-dihydro-1,4-benzodioxin-6-yl)phenyl]-2-methoxy-phenyl]methyl]-~{N}-(2-hydroxyethyl)pyrrolidine-3-carboxamide, CHLORIDE ION, Programmed cell death 1 ligand 1, ...
著者Plewka, J, Surmiak, E, Magiera-Mularz, K, Kalinowska-Tluscik, J.
登録日2023-11-22
公開日2024-01-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Solubilizer Tag Effect on PD-L1/Inhibitor Binding Properties for m -Terphenyl Derivatives.
Acs Med.Chem.Lett., 15, 2024
8R7M
DownloadVisualize
BU of 8r7m by Molmil
CTX-M14 in complex with boric acid and 1,2-diol boric ester
分子名称: BORIC ACID, Beta-lactamase, GLYCEROL, ...
著者Werner, N, Prester, A, Hinrichs, W, Perbandt, M, Betzel, C.
登録日2023-11-26
公開日2024-01-17
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Time-resolved crystallography of boric acid binding to the active site serine of the beta-lactamase CTX-M-14 and subsequent 1,2-diol esterification.
Commun Chem, 7, 2024
8QFD
DownloadVisualize
BU of 8qfd by Molmil
UFL1 E3 ligase bound 60S ribosome
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Makhlouf, L, Kulathu, Y, Zeqiraj, E.
登録日2023-09-04
公開日2024-02-21
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons.
Nature, 627, 2024
7BZZ
DownloadVisualize
BU of 7bzz by Molmil
Crystal structure of the SRCR domain of mouse SCARA5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Scavenger receptor class A member 5
著者Yu, B, He, Y.
登録日2020-04-29
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Interactions of ferritin with scavenger receptor class A members.
J.Biol.Chem., 295, 2020
8QQ3
DownloadVisualize
BU of 8qq3 by Molmil
Streptavidin with a Ni-cofactor
分子名称: 4-[4-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]butylamino]-~{N}1,~{N}1'-di(quinolin-8-yl)cyclohexane-1,1-dicarboxamide, NICKEL (II) ION, Streptavidin
著者Zhang, K, Jakob, R.P, Ward, T.R.
登録日2023-10-03
公開日2024-02-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献An artificial nickel chlorinase based on the biotin-streptavidin technology.
Chem.Commun.(Camb.), 60, 2024
8QYT
DownloadVisualize
BU of 8qyt by Molmil
Human Pyridoxine-5'-phosphate oxidase in complex with PLP
分子名称: BETA-MERCAPTOETHANOL, FLAVIN MONONUCLEOTIDE, PYRIDOXAL-5'-PHOSPHATE, ...
著者Antonelli, L, Ilari, A, Fiorillo, A.
登録日2023-10-26
公開日2024-02-07
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Identification of the pyridoxal 5'-phosphate allosteric site in human pyridox(am)ine 5'-phosphate oxidase.
Protein Sci., 33, 2024
1BAV
DownloadVisualize
BU of 1bav by Molmil
CARBOXYPEPTIDASE A COMPLEXED WITH 2-BENZYL-3-IODO-PROPANOIC ACID (BIP)
分子名称: 2-BENZYL-3-IODOPROPANOIC ACID, CARBOXYPEPTIDASE A, ZINC ION
著者Martin, P, Edwards, B.
登録日1996-11-14
公開日1997-04-01
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic and computational insight on the mechanism of zinc-ion-dependent inactivation of carboxypeptidase a by 2-benzyl-3-iodopropanoate.
J.Am.Chem.Soc., 118, 1996
8QMF
DownloadVisualize
BU of 8qmf by Molmil
Transketolase from Vibrio vulnificus in complex with thiamin pyrophosphate
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, NICKEL (II) ION, ...
著者Ballut, L, Georges, R.N, Octobre, G, Charmantray, F, Doumeche, B.
登録日2023-09-22
公開日2024-02-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural determination and kinetic analysis of the transketolase from Vibrio vulnificus reveal unexpected cooperative behavior.
Protein Sci., 33, 2024
6Y9L
DownloadVisualize
BU of 6y9l by Molmil
Crystal structure of TSWV glycoprotein N ectodomain (sGn)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein, ...
著者Dessau, M, Bahat, Y.
登録日2020-03-09
公開日2020-09-30
最終更新日2021-04-14
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Crystal structure of tomato spotted wilt virus G N reveals a dimer complex formation and evolutionary link to animal-infecting viruses
Proc.Natl.Acad.Sci.USA, 117, 2020
8QYW
DownloadVisualize
BU of 8qyw by Molmil
Human Pyridoxine-5'-phosphate oxidase mutant R225H
分子名称: FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, Pyridoxine-5'-phosphate oxidase
著者Antonelli, L, Ilari, A, Fiorillo, A.
登録日2023-10-26
公開日2024-02-07
実験手法X-RAY DIFFRACTION (2.746 Å)
主引用文献Identification of the pyridoxal 5'-phosphate allosteric site in human pyridox(am)ine 5'-phosphate oxidase.
Protein Sci., 33, 2024
8R14
DownloadVisualize
BU of 8r14 by Molmil
Structure of compound 11 bound to SARS-CoV-2 main protease
分子名称: (5-chloranylpyridin-3-yl)-[4-[(2-chlorophenyl)methyl]-1,4-diazepan-1-yl]methanone, 3C-like proteinase, BROMIDE ION, ...
著者Mac Sweeney, A, Hazemann, J.
登録日2023-11-01
公開日2024-02-07
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.336 Å)
主引用文献Identification of SARS-CoV-2 Mpro inhibitors through deep reinforcement learning for de novo drug design and computational chemistry approaches.
Rsc Med Chem, 15, 2024
8R16
DownloadVisualize
BU of 8r16 by Molmil
Structure of compound 12 bound to SARS-CoV-2 main protease
分子名称: 1,2-ETHANEDIOL, 1-[6,7-bis(chloranyl)-3,4-dihydro-1H-isoquinolin-2-yl]-2-(5-methylpyridin-3-yl)ethanone, 3C-like proteinase, ...
著者Mac Sweeney, A, Hazemann, J.
登録日2023-11-01
公開日2024-02-07
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Identification of SARS-CoV-2 Mpro inhibitors through deep reinforcement learning for de novo drug design and computational chemistry approaches.
Rsc Med Chem, 15, 2024
8RNY
DownloadVisualize
BU of 8rny by Molmil
Hen Egg White Lysozyme soaked with with [H2Ind][trans-RuCl4(DMSO)(HInd)]
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
登録日2024-01-11
公開日2024-02-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
8QOX
DownloadVisualize
BU of 8qox by Molmil
Two-component assembly of SlaA and SlaB S-layer proteins of Sulfolobus acidocaldarius
分子名称: Conserved membrane protein, S-layer protein A
著者Gambelli, L, McLaren, M, Isupov, M, Conners, R, Daum, B.
登録日2023-09-29
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (11.2 Å)
主引用文献Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024
8RH3
DownloadVisualize
BU of 8rh3 by Molmil
Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 WT bound to Gemcitabine
分子名称: (2~{R},3~{R})-4,4-bis(fluoranyl)-2-(hydroxymethyl)oxolan-3-ol, Nucleoside 2-deoxyribosyltransferase
著者Tang, P, Harding, C.J, Czekster, C.M.
登録日2023-12-14
公開日2024-02-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase.
Acs Catalysis, 14, 2024
8RE3
DownloadVisualize
BU of 8re3 by Molmil
Crystal Structure determination of Dye-decolorizing Peroxidase (DyP) mutant M190G from Deinoccoccus radiodurans
分子名称: CALCIUM ION, CHLORIDE ION, HYDROXIDE ION, ...
著者Salgueiro, B.A, Frade, K, Frazao, C, Matias, P, Moe, E.
登録日2023-12-10
公開日2024-01-31
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Biochemical, Biophysical, and Structural Analysis of an Unusual DyP from the Extremophile Deinococcus radiodurans.
Molecules, 29, 2024
1B6G
DownloadVisualize
BU of 1b6g by Molmil
HALOALKANE DEHALOGENASE AT PH 5.0 CONTAINING CHLORIDE
分子名称: CHLORIDE ION, GLYCEROL, HALOALKANE DEHALOGENASE, ...
著者Ridder, I.S, Rozeboom, H.J, Dijkstra, B.W.
登録日1999-01-14
公開日1999-07-13
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Haloalkane dehalogenase from Xanthobacter autotrophicus GJ10 refined at 1.15 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
8RE2
DownloadVisualize
BU of 8re2 by Molmil
Crystal Structure determination of Dye-decolorizing Peroxidase (DyP) from Deinoccoccus radiodurans
分子名称: GLYCEROL, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Salgueiro, B.A, Frade, K, Frazao, C, Moe, E.
登録日2023-12-10
公開日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Biochemical, Biophysical, and Structural Analysis of an Unusual DyP from the Extremophile Deinococcus radiodurans.
Molecules, 29, 2024
1B3F
DownloadVisualize
BU of 1b3f by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KHK
分子名称: PROTEIN (LYS-HIS-LYS), PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN), URANYL (VI) ION
著者Tame, J.R.H, Wilkinson, A.J.
登録日1998-12-14
公開日1998-12-16
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic and calorimetric analysis of peptide binding to OppA protein.
J.Mol.Biol., 291, 1999
8R7A
DownloadVisualize
BU of 8r7a by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein PWL2 with the HMA domain of OsHIPP43 from rice (Oryza sativa)
分子名称: Os01g0507700 protein, Pwl2 protein
著者Zdrzalek, R, Banfield, M.J.
登録日2023-11-24
公開日2024-01-31
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Bioengineering a plant NLR immune receptor with a robust binding interface toward a conserved fungal pathogen effector.
Proc.Natl.Acad.Sci.USA, 121, 2024
8RB5
DownloadVisualize
BU of 8rb5 by Molmil
Structure of the three-fold capsomer of the PNMA2 capsid
分子名称: Paraneoplastic antigen Ma2 homolog
著者Erlendsson, S, Xu, J, Shepherd, J.D, Briggs, J.A.G.
登録日2023-12-03
公開日2024-02-14
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献PNMA2 forms immunogenic non-enveloped virus-like capsids associated with paraneoplastic neurological syndrome.
Cell, 187, 2024
8RQ3
DownloadVisualize
BU of 8rq3 by Molmil
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in an autoinhibited state (nucleotide-free)
分子名称: ATP-binding cassette sub-family C member 2
著者Mazza, T, Beis, K.
登録日2024-01-17
公開日2024-02-14
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structural basis for the modulation of MRP2 activity by phosphorylation and drugs.
Nat Commun, 15, 2024
1B5I
DownloadVisualize
BU of 1b5i by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KNK
分子名称: PROTEIN (LYS-ASN-LYS), PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN), URANIUM ATOM
著者Tame, J.R.H, Wilkinson, A.J.
登録日1999-01-06
公開日1999-01-13
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic and calorimetric analysis of peptide binding to OppA protein.
J.Mol.Biol., 291, 1999

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon