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7D9Z
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BU of 7d9z by Molmil
Crystal structure of anti-basigin Fab fragment
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, Heavy chain of antibody Fab fragment, ...
著者Sakuragi, T, Kanai, R, Narita, H, Onishi, E, Miyazaki, T, Baba, T, Nakagawa, A, Toyoshima, C, Nagata, S.
登録日2020-10-14
公開日2021-10-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.123 Å)
主引用文献The tertiary structure of the human Xkr8-Basigin complex that scrambles phospholipids at plasma membranes.
Nat.Struct.Mol.Biol., 28, 2021
1NZM
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BU of 1nzm by Molmil
NMR structure of the parallel-stranded DNA quadruplex d(TTAGGGT)4 complexed with the telomerase inhibitor RHPS4
分子名称: 3,11-DIFLUORO-6,8,13-TRIMETHYL-8H-QUINO[4,3,2-KL]ACRIDIN-13-IUM, 5'-D(*TP*TP*AP*GP*GP*GP*T)-3', POTASSIUM ION
著者Gavathiotis, E, Heald, R.A, Stevens, M.F.G, Searle, M.S.
登録日2003-02-18
公開日2003-11-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Drug Recognition and Stabilisation of the Parallel-stranded DNA Quadruplex d(TTAGGGT)4 Containing the Human Telomeric Repeat
J.Mol.Biol., 334, 2003
2YBG
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BU of 2ybg by Molmil
Structure of Lys120-acetylated p53 core domain
分子名称: CELLULAR TUMOR ANTIGEN P53, ZINC ION
著者Arbely, E, Allen, M.D, Joerger, A.C, Fersht, A.R.
登録日2011-03-08
公開日2011-05-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Acetylation of Lysine 120 of P53 Endows DNA- Binding Specificity at Effective Physiological Salt Concentration.
Proc.Natl.Acad.Sci.USA, 108, 2011
1RF3
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BU of 1rf3 by Molmil
Structurally Distinct Recognition Motifs in Lymphotoxin-B Receptor and CD40 for TRAF-mediated Signaling
分子名称: 24-residue peptide from Lymphotoxin-B Receptor, TNF receptor associated factor 3
著者Li, C, Norris, P.S, Ni, C.Z, Havert, M.L, Chiong, E.M, Tran, B.R, Cabezas, E, Cheng, G, Reed, J.C, Satterthwait, A.C, Ware, C.F, Ely, K.R.
登録日2003-11-07
公開日2004-07-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structurally distinct recognition motifs in lymphotoxin-beta receptor and CD40 for tumor necrosis factor receptor-associated factor (TRAF)-mediated signaling.
J.Biol.Chem., 278, 2003
5EAV
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BU of 5eav by Molmil
Unliganded structure of the ornithine aminotransferase from Toxoplasma gondii
分子名称: DI(HYDROXYETHYL)ETHER, Ornithine aminotransferase, mitochondrial, ...
著者Filippova, E.V, Minasov, G, Flores, K, Le, H.V, Silverman, R.B, McLeod, R.L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-10-16
公開日2015-11-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Unliganded structure of the ornithine aminotransferase from Toxoplasma gondii
To Be Published
3EH7
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BU of 3eh7 by Molmil
The structure of a putative 4-hydroxybutyrate CoA-transferase from Porphyromonas gingivalis W83
分子名称: 4-hydroxybutyrate CoA-transferase, CHLORIDE ION
著者Cuff, M.E, Duggan, E, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-09-11
公開日2008-12-09
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The structure of a putative 4-hydroxybutyrate CoA-transferase from Porphyromonas gingivalis W83
TO BE PUBLISHED
6A76
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BU of 6a76 by Molmil
Crystal structure of the Fab fragment of B5209B, a murine monoclonal antibody specific for the fifth immunoglobulin domain (Ig5) of human ROBO1
分子名称: GLYCEROL, Heavy chain of the anti-human Robo1 antibody B5209B Fab, Light chain of the anti-human Robo1 antibody B5209B Fab, ...
著者Mizohata, E, Nakayama, T, Kado, Y, Inoue, T.
登録日2018-07-02
公開日2019-01-30
最終更新日2019-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Affinity Improvement of a Cancer-Targeted Antibody through Alanine-Induced Adjustment of Antigen-Antibody Interface.
Structure, 27, 2019
4OJL
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Crystal Structure of Putative Tailspike Protein (TSP1, orf210) from Escherichia coli O157:H7 Bacteriohage CBA120 in Complex with Glucose
分子名称: Tailspike protein, ZINC ION, beta-D-glucopyranose
著者Chen, C, Herzberg, O.
登録日2014-01-21
公開日2014-03-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of ORF210 from E. coli O157:H1 phage CBA120 (TSP1), a putative tailspike protein.
Plos One, 9, 2014
5OPU
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BU of 5opu by Molmil
Structure of CHK1 10-pt. mutant complex with pyrrolopyridine LRRK2 inhibitor
分子名称: 6-azanyl-4-(3-methylphenyl)-1~{H}-pyrrolo[2,3-b]pyridine-3-carbonitrile, CHLORIDE ION, Serine/threonine-protein kinase Chk1
著者Dokurno, P, Williamson, D.S, Acheson-Dossang, P, Chen, I, Murray, J.B, Shaw, T, Surgenor, A.E.
登録日2017-08-10
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Design of Leucine-Rich Repeat Kinase 2 (LRRK2) Inhibitors Using a Crystallographic Surrogate Derived from Checkpoint Kinase 1 (CHK1).
J. Med. Chem., 60, 2017
4KNN
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BU of 4knn by Molmil
Crystal structure of human carbonic anhydrase isozyme XIII with 2-Chloro-4-[(pyrimidin-2-ylsulfanyl)acetyl]benzenesulfonamide
分子名称: 1,2-ETHANEDIOL, 2-chloro-4-[(pyrimidin-2-ylsulfanyl)acetyl]benzenesulfonamide, ACETIC ACID, ...
著者Smirnov, A, Manakova, E, Grazulis, S.
登録日2013-05-10
公開日2013-11-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.404 Å)
主引用文献Benzenesulfonamides with pyrimidine moiety as inhibitors of human carbonic anhydrases I, II, VI, VII, XII, and XIII
Bioorg.Med.Chem., 21, 2013
6S2N
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BU of 6s2n by Molmil
Hen egg-white lysozyme by serial electron diffraction
分子名称: Lysozyme C
著者Buecker, R, Mehrabi, P, Schulz, E.C, Hogan-Lamarre, P.
登録日2019-06-21
公開日2020-04-29
最終更新日2020-11-18
実験手法ELECTRON CRYSTALLOGRAPHY (1.8 Å)
主引用文献Serial protein crystallography in an electron microscope.
Nat Commun, 11, 2020
1J08
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BU of 1j08 by Molmil
Crystal structure of glutaredoxin-like protein from Pyrococcus horikoshii
分子名称: glutaredoxin-like protein
著者Tanaka, Y, Tanabe, E, Tsumoto, K, Kumagai, I, Yao, M, Tanaka, I.
登録日2002-11-11
公開日2003-05-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Protein disulfide isomerase from hyperthermophile as an additives of refolding of an immunoglobulin-folded protein
To be Published
151D
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BU of 151d by Molmil
DIVERSITY OF WATER RING SIZE AT DNA INTERFACES: HYDRATION AND DYNAMICS OF DNA-ANTHRACYCLINE COMPLEXES
分子名称: DNA (5'-D(*CP*GP*AP*TP*CP*G)-3'), DOXORUBICIN
著者Lipscomb, L.A, Peek, M.E, Zhou, F.X, Bertrand, J.A, VanDerveer, D, Williams, L.D.
登録日1993-12-13
公開日1994-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Water ring structure at DNA interfaces: hydration and dynamics of DNA-anthracycline complexes.
Biochemistry, 33, 1994
1J7J
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BU of 1j7j by Molmil
Crystal Structure of the HPRT from Salmonella typhimurium
分子名称: MAGNESIUM ION, hypoxanthine phosphoribosyltransferase
著者Lee, C.C, Focia, P.J, Spraggon, G, Eakin, A.E.
登録日2001-05-16
公開日2003-07-29
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the HPRT from Salmonella Typhimurium at 2.3 A Resolution
To be Published
4DO8
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BU of 4do8 by Molmil
Crystal structure of the muscarinic toxin MT1
分子名称: ACETATE ION, Muscarinic toxin 1, THIOCYANATE ION
著者Fruchart-Gaillard, C, Mournier, G, Vera, L, Servent, D, Stura, E.A.
登録日2012-02-09
公開日2012-06-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Engineering of three-finger fold toxins creates ligands with original pharmacological profiles for muscarinic and adrenergic receptors.
Plos One, 7, 2012
6AF2
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BU of 6af2 by Molmil
Crystal structure of N-terminus deletion mutant of Mycobacterium avium diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase
分子名称: DI(HYDROXYETHYL)ETHER, HIT domain-containing protein, PENTAETHYLENE GLYCOL, ...
著者Mori, S, Honda, N, Kim, H, Rimbara, E, Shibayama, K.
登録日2018-08-08
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献Crystal structure of N-terminus deletion mutant of Mycobacterium avium diadenosine tetraphosphate phosphorylase
To Be Published
5X6I
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BU of 5x6i by Molmil
Crystal structure of B. subtilis adenylate kinase variant
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
著者Moon, S, Bae, E.
登録日2017-02-22
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability.
Struct Dyn., 6, 2019
3S2F
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BU of 3s2f by Molmil
Crystal Structure of FurX NADH:Furfural
分子名称: FURFURAL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHORYLISOPROPANE, ...
著者Hayes, R, Sanchez, E.J, Webb, B.N, Hooper, T, Nissen, M.S, Li, Q, Xun, L.
登録日2011-05-16
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures and furfural reduction mechanism of a bacterial zinc-dependent alcohol dehydrogenase
To be Published
8CPD
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BU of 8cpd by Molmil
Cryo-EM structure of CRaf dimer with 14:3:3
分子名称: 14-3-3 protein zeta isoform X1, RAF proto-oncogene serine/threonine-protein kinase
著者Dedden, D, Graedler, U, Schwarz, D, Thomsen, M, Leuthner, B, Schneider, E, Nitsche, J.
登録日2023-03-02
公開日2024-02-21
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Cryo-EM Structures of CRAF 2 /14-3-3 2 and CRAF 2 /14-3-3 2 /MEK1 2 Complexes.
J.Mol.Biol., 436, 2024
3LTF
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BU of 3ltf by Molmil
Crystal Structure of the Drosophila Epidermal Growth Factor Receptor ectodomain in complex with Spitz
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Epidermal growth factor receptor, ...
著者Alvarado, D, Klein, D.E, Lemmon, M.A.
登録日2010-02-15
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for negative cooperativity in growth factor binding to an EGF receptor.
Cell(Cambridge,Mass.), 142, 2010
2FNE
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BU of 2fne by Molmil
The crystal structure of the 13th PDZ domain of MPDZ
分子名称: Multiple PDZ domain protein
著者Papagrigoriou, E, Berridge, G, Johansson, C, Colebrook, S, Salah, E, Burgess, N, Smee, C, Savitsky, P, Bray, J, Schoch, G, Phillips, C, Gileadi, C, Soundarajan, M, Yang, X, Elkins, J.M, Gorrec, F, Turnbull, A, Edwards, A, Arrowsmith, C, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
登録日2006-01-11
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions.
Protein Sci., 16, 2007
4KZ1
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BU of 4kz1 by Molmil
Crystal structure of the soluble domain of VirB8 from Bartonella grahamii
分子名称: VirB8 protein
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2013-05-29
公開日2014-03-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural Insight into How Bacteria Prevent Interference between Multiple Divergent Type IV Secretion Systems.
MBio, 6, 2015
1AB6
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BU of 1ab6 by Molmil
STRUCTURE OF CHEY MUTANT F14N, V86T
分子名称: CHEMOTAXIS PROTEIN CHEY
著者Wilcock, D, Pisabarro, M.T, Lopez-Hernandez, E, Serranno, L, Coll, M.
登録日1997-02-04
公開日1998-02-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure analysis of two CheY mutants: importance of the hydrogen-bond contribution to protein stability.
Acta Crystallogr.,Sect.D, 54, 1998
8C7D
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BU of 8c7d by Molmil
Structure of the GEF Kalirin DH2 Domain
分子名称: Kalirin
著者Callens, M.C, Thompson, A.P, Gray, J.L, Bountra, C, von Delft, F, Brennan, P.E.
登録日2023-01-14
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure-based alignment and analysis of RHO selectivity of RHO-DBL GTPase exchange factors
to be published
8BYL
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BU of 8byl by Molmil
Cryo-EM structure of SKP1-SKP2-CKS1 from the SCFSKP2 E3 ligase complex
分子名称: Cyclin-dependent kinase inhibitor 1B, Cyclin-dependent kinases regulatory subunit 1, S-phase kinase-associated protein 1, ...
著者Rowland, R.J, Salamina, M, Endicott, J.A, Noble, M.E.M.
登録日2022-12-13
公開日2023-06-28
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of SKP1-SKP2-CKS1 in complex with CDK2-cyclin A-p27KIP1.
Sci Rep, 13, 2023

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