PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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3LFM	Crystal structure of the fat mass and obesity associated (FTO) protein reveals basis for its substrate specificity 分子名称: 3-methylthymidine, FE (II) ION, N-OXALYLGLYCINE, ... 著者 Chai, J, Han, Z. 登録日 2010-01-18 公開日 2010-04-07 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of the FTO protein reveals basis for its substrate specificity Nature, 464, 2010
9R0Y	Crystal structure of NDM-1 with thiol compound 22b 分子名称: Metallo-beta-lactamase type 2, SULFATE ION, ZINC ION, ... 著者 Hinchliffe, P, Spencer, J. 登録日 2025-04-24 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (1.27 Å) 主引用文献 Repurposing of compound libraries yields new inhibitors of NDM-1 metallo-beta-lactamase with diverse zinc-binding moieties Eur J Med Chem Rep, 15, 2025
3OZJ	Crystal structure of human retinoic X receptor alpha complexed with bigelovin and coactivator SRC-1 分子名称: (3aR,4S,4aR,7aR,8R,9aS)-4a,8-dimethyl-3-methylidene-2,5-dioxo-2,3,3a,4,4a,5,7a,8,9,9a-decahydroazuleno[6,5-b]furan-4-yl acetate, Retinoic acid receptor RXR-alpha, SRC-1, ... 著者 Zhang, H, Li, L, Chen, L, Hu, L, Shen, X. 登録日 2010-09-25 公開日 2011-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure basis of bigelovin as a selective RXR agonist with a distinct binding mode J.Mol.Biol., 407, 2011
9QIU	Crystal structure of YTHDF2 in complex with compound 13 (AI-DF2-56) 分子名称: 3-sulfanyl-1,2,4-triazin-5-ol, GLYCEROL, SULFATE ION, ... 著者 Nai, F, Invernizzi, A, Caflisch, A. 登録日 2025-03-17 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 Discovery of YTHDF2 Ligands by Fragment-Based Design Acs Bio Med Chem Au, 2025
9OIO	The von Hippel Lindau-ElonginB-ElonginC (VCB) complex with fragments 9 and 14 分子名称: 1-[(2-fluorophenyl)methyl]-4-(propan-2-yl)piperazine, 1-[6-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]-2,3-dihydroindol-1-yl]ethanone, DIMETHYL SULFOXIDE, ... 著者 Amporndanai, K, Katinas, J.M, Chopra, A, Fesik, S.W. 登録日 2025-05-06 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 NMR-Based Fragment Screen of the von Hippel-Lindau Elongin C&B Complex Acs Med.Chem.Lett., 2025
9CE2	Respiratory supercomplex I+III2+IV open state 分子名称: Acyl carrier protein, Cytochrome b, Cytochrome b-c1 complex subunit 1, ... 著者 Zhang, Z, Maharjan, R, Tringides, M. 登録日 2024-06-25 公開日 2025-07-09 実験手法 ELECTRON MICROSCOPY (3.41 Å) 主引用文献 Respiratory supercomplex I+III2+IV open state To Be Published
9CXP	Cyan thermostable protein (CTP) 0.75 at pH 7.4 分子名称: Cyan thermostable protein 0.75 著者 Jurkowski, A.J, DeVore, N.M. 登録日 2024-07-31 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Cyan Thermal Proteins Derived From Thermal Green Protein. Proteins, 2025
3SUA	Crystal structure of the intracellular domain of Plexin-B1 in complex with Rac1 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Plexin-B1, ... 著者 Bell, C.H, Aricescu, A.R, Jones, E.Y, Siebold, C. 登録日 2011-07-11 公開日 2011-09-07 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (4.39 Å) 主引用文献 A Dual Binding Mode for RhoGTPases in Plexin Signalling. Plos Biol., 9, 2011
3T3L	1.15 A structure of human frataxin variant Q153A 分子名称: Frataxin, mitochondrial, SULFATE ION 著者 Bridwell-Rabb, J, Winn, A.M, Barondeau, D.P. 登録日 2011-07-25 公開日 2011-08-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Structure-Function Analysis of Friedreich's Ataxia Mutants Reveals Determinants of Frataxin Binding and Activation of the Fe-S Assembly Complex. Biochemistry, 50, 2011
9DC6	Structure of J-PKAc chimera in complex with Aplithianine e1 分子名称: N-(2-aminoethyl)-4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-3,4-dihydro-2H-1,4-thiazine-6-carboxamide, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha 著者 Martinez Fiesco, J.A, Zhang, P. 登録日 2024-08-25 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Chemical Evolution of Aplithianine Class of Serine/Threonine Kinase Inhibitors. J.Med.Chem., 68, 2025
3P2V	Novel Benzothiazepine Inhibitor in Complex with human Aldose Reductase 分子名称: Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, [(2S)-4-oxo-2-phenyl-3,4-dihydro-1,5-benzothiazepin-5(2H)-yl]acetic acid 著者 Koch, C, Heine, A, Klebe, G. 登録日 2010-10-04 公開日 2011-08-24 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Ligand-induced fit affects binding modes and provokes changes in crystal packing of aldose reductase Biochim.Biophys.Acta, 1810, 2011
6J4M	Thermal treated soybean seed H-2 ferritin 分子名称: Ferritin, MAGNESIUM ION 著者 Zhang, X, Zang, J, Chen, H, Zhou, K, Zhao, G. 登録日 2019-01-09 公開日 2019-09-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.598 Å) 主引用文献 Thermostability of protein nanocages: the effect of natural extra peptide on the exterior surface. Rsc Adv, 9, 2019
8DVN	Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.10 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Thakur, A.K, Liau, N.P.D, Sudhamsu, J, Hannoush, R.N. 登録日 2022-07-29 公開日 2023-03-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.53 Å) 主引用文献 Synthetic Multivalent Disulfide-Constrained Peptide Agonists Potentiate Wnt1/ beta-Catenin Signaling via LRP6 Coreceptor Clustering. Acs Chem.Biol., 18, 2023
9FU3	Closed CODH/ACS in the methylated state 分子名称: CO-methylating acetyl-CoA synthase, Carbon monoxide dehydrogenase, Fe(3)-Ni(1)-S(4) cluster, ... 著者 Ruickoldt, J, Wendler, P, Dobbek, H. 登録日 2024-06-26 公開日 2025-07-09 実験手法 ELECTRON MICROSCOPY (2.35 Å) 主引用文献 The CODH/ACS complex caught in action To Be Published
1YLK	Crystal Structure of Rv1284 from Mycobacterium tuberculosis in Complex with Thiocyanate 分子名称: Hypothetical protein Rv1284/MT1322, THIOCYANATE ION, ZINC ION 著者 Covarrubias, A.S, Larsson, A.M, Hogbom, M, Lindberg, J, Bergfors, T, Bjorkelid, C, Mowbray, S.L, Unge, T, Jones, T.A, Structural Proteomics in Europe (SPINE) 登録日 2005-01-19 公開日 2005-03-08 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and function of carbonic anhydrases from Mycobacterium tuberculosis. J.Biol.Chem., 280, 2005
6S61	Apoferritin from mouse at 1.84 angstrom resolution 分子名称: FE (III) ION, Ferritin heavy chain, ZINC ION 著者 Vonck, J, Pfeil-Gardiner, O, Mills, D.J. 登録日 2019-07-02 公開日 2019-07-10 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (1.84 Å) 主引用文献 To be published later To Be Published
9F0T	Structure of KPC-2 complexed with benzoxaborole AK-110 分子名称: Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL, SODIUM ION, ... 著者 Tooke, C.L, Hinchliffe, P, Spencer, J. 登録日 2024-04-17 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (0.98 Å) 主引用文献 Structure of KPC-2 complexed with benzoxaborole AK-110 To Be Published
6UFB	Carbonic anhydrase 2 with inhibitor (2Z)-2-benzylidene-3-oxo-N-(4-sulfamoylphenyl)butanamide (11a/D1) 分子名称: (2Z)-2-benzylidene-3-oxo-N-(4-sulfamoylphenyl)butanamide, CHLORIDE ION, Carbonic anhydrase 2, ... 著者 Peat, T.S. 登録日 2019-09-24 公開日 2020-08-05 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Discovery of Potent Dual-Tailed Benzenesulfonamide Inhibitors of Human Carbonic Anhydrases Implicated in Glaucoma and in Vivo Profiling of Their Intraocular Pressure-Lowering Action. J.Med.Chem., 63, 2020
9FI5	Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) mutant Y298F in complex tetramannuronic acid at pH 3.5 分子名称: Alginate lyase family protein, SULFATE ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid 著者 Tandrup, T, Wilkens, C. 登録日 2024-05-28 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 The Swiss Army Knife of Alginate Metabolism: Mechanistic Analysis of a Mixed-Function Polysaccharide Lyase/Epimerase of the Human Gut Microbiota. J.Am.Chem.Soc., 2025
6S7F	Human CD73 (5'-nucleotidase) in complex with PSB12379 (an AOPCP derivative) in the closed state 分子名称: 5'-nucleotidase, CALCIUM ION, N6-benzyl-(alpha,beta)-methylene-ADP, ... 著者 Pippel, J, Strater, N. 登録日 2019-07-04 公開日 2020-07-22 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 X-Ray Co-Crystal Structure Guides the Way to Subnanomolar Competitive Ecto-5'-Nucleotidase (CD73) Inhibitors for Cancer Immunotherapy Adv Ther, 2019
9OSM	[4,8,7-2] Shifted tensegrity triangle with an (arm,center,arm) distribution of (4,8,7) base pairs and 2 nt sticky ends complexing calcium 分子名称: CALCIUM ION, DNA (5'-D(*GP*AP*GP*AP*GP*CP*TP*GP*TP*G)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*TP*CP*GP*TP*GP*CP*TP*C)-3'), ... 著者 Horvath, A, Vecchioni, S, Woloszyn, K, Ohayon, Y.P, Sha, R. 登録日 2025-05-24 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (2.93 Å) 主引用文献 Shifted tensegrity triangles To Be Published
1YMT	Mouse SF-1 LBD 分子名称: 1-CIS-9-OCTADECANOYL-2-CIS-9-HEXADECANOYL PHOSPHATIDYL GLYCEROL, Nuclear receptor 0B2, Steroidogenic factor 1 著者 Krylova, I.N, Sablin, E.P, Moore, J, Xu, R.X, Waitt, G.M, Juzumiene, D, Bynum, J.M, Fletterick, R.J, Willson, T.M, Ingraham, H.A. 登録日 2005-01-21 公開日 2005-03-15 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structural analyses reveal phosphatidyl inositols as ligands for the NR5 orphan receptors SF-1 and LRH-1 Cell(Cambridge,Mass.), 120, 2005
9FU4	Wobbly CODH/ACS in the as isolated state 分子名称: CO-methylating acetyl-CoA synthase, Carbon monoxide dehydrogenase, Fe(3)-Ni(1)-S(4) cluster, ... 著者 Ruickoldt, J, Wendler, P, Dobbek, H. 登録日 2024-06-26 公開日 2025-07-09 実験手法 ELECTRON MICROSCOPY (1.9 Å) 主引用文献 The CODH/ACS complex caught in action To Be Published
1H0X	Structure of Alba: an archaeal chromatin protein modulated by acetylation 分子名称: DNA BINDING PROTEIN SSO10B 著者 Wardleworth, B.N, Russell, R.J.M, Bell, S.D, Taylor, G.L, White, M.F. 登録日 2002-07-01 公開日 2002-09-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of Alba: An Archaeal Chromatin Protein Modulated by Acetylation Embo J., 21, 2002
8DVL	Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.18 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Thakur, A.K, Liau, N.P.D, Sudhamsu, J, Hannoush, R.N. 登録日 2022-07-29 公開日 2023-03-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Synthetic Multivalent Disulfide-Constrained Peptide Agonists Potentiate Wnt1/ beta-Catenin Signaling via LRP6 Coreceptor Clustering. Acs Chem.Biol., 18, 2023

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