PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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5H7D	Crystal structure of the YgjG-protein A-Zpa963-calmodulin complex 分子名称: CALCIUM ION, Putrescine aminotransferase,Immunoglobulin G-binding protein A, Zpa963,Calmodulin 著者 Youn, S.J, Kwon, N.Y, Lee, J.H, Kim, J.H, Lee, H, Lee, J.O. 登録日 2016-11-17 公開日 2017-06-28 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.57 Å) 主引用文献 Construction of novel repeat proteins with rigid and predictable structures using a shared helix method. Sci Rep, 7, 2017
5HDQ	MntC co-structure with mAB 305-78-7 分子名称: ABC transporter substrate-binding protein, FE (III) ION, Fab Heavy Chain, ... 著者 Parris, K, Mosyak, L. 登録日 2016-01-05 公開日 2016-09-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 High Resolution Mapping of Bactericidal Monoclonal Antibody Binding Epitopes on Staphylococcus aureus Antigen MntC. Plos Pathog., 12, 2016
5H8X	Crystal structure of the complex MMP-8/BF471 (catechol inhibitor) 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Neutrophil collagenase, ... 著者 Pochetti, G, Montanari, R, Capelli, D, Tortorella, P. 登録日 2015-12-24 公開日 2016-11-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Catechol-based matrix metalloproteinase inhibitors with additional antioxidative activity. J Enzyme Inhib Med Chem, 31, 2016
6OF1	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Khabibullina, N.F, Tereshchenkov, A.G, Komarova, E.S, Syroegin, E.A, Shiriaev, D.I, Paleskava, A, Kartsev, V.G, Bogdanov, A.A, Konevega, A.L, Dontsova, O.A, Sergiev, P.V, Osterman, I.A, Polikanov, Y.S. 登録日 2019-03-28 公開日 2019-04-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of Dirithromycin Bound to the Bacterial Ribosome Suggests New Ways for Rational Improvement of Macrolides. Antimicrob.Agents Chemother., 63, 2019
5HDX	BACE-1 in complex with (7aR)-7a-(5-cyanothiophen-2-yl)-6-(4-ethoxy-5-fluoro-6-methylpyrimidin-2-yl)-3-methyl-4-oxooctahydro-2H-pyrrolo[3,4-d]pyrimidin-2-iminium 分子名称: 5-[(2E,4aR,7aR)-6-(4-ethoxy-5-fluoro-6-methylpyrimidin-2-yl)-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophene-2-carbonitrile, Beta-secretase 1 著者 Orth, P. 登録日 2016-01-05 公開日 2016-03-16 最終更新日 2016-04-27 実験手法 X-RAY DIFFRACTION (1.602 Å) 主引用文献 Structure-Based Design of an Iminoheterocyclic beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE) Inhibitor that Lowers Central A beta in Nonhuman Primates. J.Med.Chem., 59, 2016
3LFY	CTD of Tarocystatin in complex with papain 分子名称: ASPARAGINE, GLYCINE, Papain, ... 著者 Chu, M.H, Liu, K.L, Yeh, K.W, Cheng, Y.S. 登録日 2010-01-19 公開日 2010-07-21 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of tarocystatin-papain complex: implications for the inhibition property of group-2 phytocystatins. Planta, 234, 2011
7SIG	Crystal Structure of HLA B*3501 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I 分子名称: Beta-2-microglobulin, CITRATE ANION, MHC class I antigen, ... 著者 Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M. 登録日 2021-10-14 公開日 2022-11-23 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.741 Å) 主引用文献 Molecular insights into the HLA-B35 molecules' classification associated with HIV control. Immunol.Cell.Biol., 102, 2024
5H8Y	Crystal structure of the complex between maize sulfite reductase and ferredoxin in the form-2 crystal 分子名称: CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin-1, ... 著者 Kurisu, G, Nakayama, M, Hase, T. 登録日 2015-12-25 公開日 2016-04-13 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural and mutational studies of an electron transfer complex of maize sulfite reductase and ferredoxin. J.Biochem., 160, 2016
5HE4	BACE-1 in complex with (4aR,7aS)-7a-(2,6-difluorophenyl)-6-(5-fluoro-4-methoxy-6-methylpyrimidin-2-yl)-3-methyl-4-oxooctahydro-2H-pyrrolo[3,4-d]pyrimidin-2-iminium 分子名称: (2E,4aR,7aS)-7a-(2,6-difluorophenyl)-6-(5-fluoro-4-methoxy-6-methylpyrimidin-2-yl)-2-imino-3-methyloctahydro-4H-pyrrolo[3,4-d]pyrimidin-4-one, Beta-secretase 1, L(+)-TARTARIC ACID 著者 Orth, P. 登録日 2016-01-05 公開日 2016-03-16 最終更新日 2016-04-27 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Structure-Based Design of an Iminoheterocyclic beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE) Inhibitor that Lowers Central A beta in Nonhuman Primates. J.Med.Chem., 59, 2016
5H9M	Crystal structure of siah2 SBD domain 分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase SIAH2, PENTAETHYLENE GLYCOL, ... 著者 Dong, A, Zhang, Q, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC) 登録日 2015-12-28 公開日 2016-02-17 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.761 Å) 主引用文献 Crystal structure of siah2 SBD domain to be published
3LGG	Crystal structure of human adenosine deaminase growth factor, adenosine deaminase type 2 (ADA2) complexed with transition state analogue, coformycin 分子名称: (8R)-3-beta-D-ribofuranosyl-3,6,7,8-tetrahydroimidazo[4,5-d][1,3]diazepin-8-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Adenosine deaminase CECR1, ... 著者 Zavialov, A.V. 登録日 2010-01-20 公開日 2010-02-09 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for the growth factor activity of human adenosine deaminase ADA2. J.Biol.Chem., 285, 2010
3LGP	Crystal structure of catalytic domain of tace with benzimidazolyl-thienyl-tartrate based inhibitor 分子名称: (2R,3R)-4-[(2R)-2-(3-chlorophenyl)pyrrolidin-1-yl]-2,3-dihydroxy-4-oxo-N-[(5-{[2-(trifluoromethyl)-1H-benzimidazol-1-yl]methyl}thiophen-2-yl)methyl]butanamide, Disintegrin and metalloproteinase domain-containing protein 17, ZINC ION 著者 Orth, P. 登録日 2010-01-21 公開日 2010-07-28 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure and activity relationships of tartrate-based TACE inhibitors. Bioorg.Med.Chem.Lett., 20, 2010
5HEB	The third PDZ domain from the synaptic protein PSD-95 in complex with a C-terminal peptide derived from CRIPT 分子名称: Cysteine-rich PDZ-binding protein, Disks large homolog 4, GLYCEROL 著者 White, K.I, Raman, A.S, Ranganathan, R. 登録日 2016-01-05 公開日 2016-11-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Origins of Allostery and Evolvability in Proteins: A Case Study. Cell(Cambridge,Mass.), 166, 2016
5H9S	Crystal Structure of Human Galectin-7 in Complex with TAZTDG 分子名称: (2~{S},3~{R},4~{S},5~{R},6~{R})-2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-4-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]sulfanyl-6-(hydroxymethyl)oxane-3,4,5-triol, Galectin-7 著者 Hsieh, T.J, Lin, H.Y, Lin, C.H. 登録日 2015-12-29 公開日 2016-06-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.821 Å) 主引用文献 Dual thio-digalactoside-binding modes of human galectins as the structural basis for the design of potent and selective inhibitors Sci Rep, 6, 2016
7SIF	Crystal Structure of HLA B*3505 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-2-microglobulin, ... 著者 Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M. 登録日 2021-10-14 公開日 2022-11-23 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Molecular insights into the HLA-B35 molecules' classification associated with HIV control. Immunol.Cell.Biol., 102, 2024
3LHC	Crystal structure of cyanovirin-n swapping domain b mutant 分子名称: Cyanovirin-N, PHOSPHATE ION, SODIUM ION 著者 Matei, E, Zheng, A, Furey, W, Rose, J, Aiken, C, Gronenborn, A.M. 登録日 2010-01-21 公開日 2010-02-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Anti-HIV activity of defective cyanovirin-N mutants is restored by dimerization. J.Biol.Chem., 285, 2010
6OMQ	Crystal structure of PtmU3 complexed with PTM substrate 分子名称: ACETATE ION, MANGANESE (II) ION, PtmU3, ... 著者 Liu, Y.C, Dong, L.B, Shen, B. 登録日 2019-04-19 公開日 2019-07-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Characterization and Crystal Structure of a Nonheme Diiron Monooxygenase Involved in Platensimycin and Platencin Biosynthesis. J.Am.Chem.Soc., 141, 2019
5HEJ	Pentameric ligand-gated ion channel ELIC mutant F116A 分子名称: Gamma-aminobutyric-acid receptor subunit beta-1 著者 Bertozzi, C, Dutzler, R. 登録日 2016-01-06 公開日 2016-03-02 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Signal Transduction at the Domain Interface of Prokaryotic Pentameric Ligand-Gated Ion Channels. Plos Biol., 14, 2016
5HA4	Structure of a diaminopimelate epimerase from Acinetobacter baumannii 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, Diaminopimelate epimerase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2015-12-30 公開日 2016-01-27 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure of a diaminopimelate epimerase from Acinetobacter baumannii to be published
3LH8	Crystal structure of mouse VPS26B in spacegroup P41 21 2 分子名称: Vacuolar protein sorting-associated protein 26B 著者 Collins, B, Shaw, D, Norwood, S. 登録日 2010-01-21 公開日 2010-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Assembly and solution structure of the core retromer protein complex. Traffic, 12, 2011
5HFM	Gp41-targeting HIV-1 fusion inhibitors with hook-like Ile-Asp-Leu tail 分子名称: Envelope glycoprotein gp160,gp41 CHR region, TRIS(HYDROXYETHYL)AMINOMETHANE 著者 Zhu, Y, Ye, S, Zhang, R. 登録日 2016-01-07 公開日 2017-01-11 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.298 Å) 主引用文献 Rational improvement of gp41-targeting HIV-1 fusion inhibitors: an innovatively designed Ile-Asp-Leu tail with alternative conformations Sci Rep, 6, 2016
3LRF	Crystal structure of beta-ketoacyl synthase from brucella melitensis 分子名称: Beta-ketoacyl synthase, SODIUM ION 著者 Abendroth, J, Edwards, T, Staker, B, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2010-02-11 公開日 2010-03-31 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural characterization of beta-ketoacyl ACP synthase I bound to platencin and fragment screening molecules at two substrate binding sites. Proteins, 88, 2020
5HAI	P99 beta-lactamase mutant - S64G 分子名称: Beta-lactamase, PHOSPHATE ION 著者 Stojanoski, V, Adamski, C.J, Hu, L, Mehta, S.C, Sankaran, B, Prasad, B.V.V, Palzkill, T.G. 登録日 2015-12-30 公開日 2016-09-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 Removal of the Side Chain at the Active-Site Serine by a Glycine Substitution Increases the Stability of a Wide Range of Serine beta-Lactamases by Relieving Steric Strain. Biochemistry, 55, 2016
6UER	Crystal form 2: Structure of TBP bound to C-C mismatch at pH 7 分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1 著者 Schumacher, M.A, Al-Hashimi, H. 登録日 2019-09-22 公開日 2020-09-02 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 DNA mismatches reveal conformational penalties in protein-DNA recognition. Nature, 587, 2020
5HFZ	Mmi1 YTH domain 分子名称: YTH domain-containing protein mmi1 著者 Chatterjee, D, Goldgur, Y, Shuman, S. 登録日 2016-01-07 公開日 2016-02-10 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Transcription of lncRNA prt, clustered prt RNA sites for Mmi1 binding, and RNA polymerase II CTD phospho-sites govern the repression of pho1 gene expression under phosphate-replete conditions in fission yeast. Rna, 22, 2016

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