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5SV0
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BU of 5sv0 by Molmil
Structure of the ExbB/ExbD complex from E. coli at pH 7.0
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Biopolymer transport protein ExbB, CALCIUM ION
著者Celia, H, Botos, I, Lloubes, R, Buchanan, S.K, Noinaj, N.
登録日2016-08-04
公開日2016-09-28
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insight into the role of the Ton complex in energy transduction.
Nature, 538, 2016
5SYA
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BU of 5sya by Molmil
Atomic resolution structure of D24N mutant human DJ-1
分子名称: 1,2-ETHANEDIOL, Protein deglycase DJ-1
著者Wilson, M.A, Lin, J.
登録日2016-08-10
公開日2016-12-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Short Carboxylic Acid-Carboxylate Hydrogen Bonds Can Have Fully Localized Protons.
Biochemistry, 56, 2017
1U4A
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BU of 1u4a by Molmil
Solution structure of human SUMO-3 C47S
分子名称: Ubiquitin-like protein SMT3A
著者Ding, H, Xu, Y, Dai, H, Tang, Y, Wu, J, Shi, Y.
登録日2004-07-23
公開日2005-03-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of Human SUMO-3 C47S and Its Binding Surface for Ubc9
Biochemistry, 44, 2005
1U67
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Crystal Structure of Arachidonic Acid Bound to a Mutant of Prostagladin H Synthase-1 that Forms Predominantly 11-HPETE.
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ARACHIDONIC ACID, PROTOPORPHYRIN IX CONTAINING CO, ...
著者Harman, C.A, Rieke, C.J, Garavito, R.M, Smith, W.L.
登録日2004-07-29
公開日2004-09-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure of arachidonic Acid bound to a mutant of prostaglandin endoperoxide h synthase-1 that forms predominantly 11-hydroperoxyeicosatetraenoic Acid.
J.Biol.Chem., 279, 2004
5T0U
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BU of 5t0u by Molmil
CTCF ZnF2-7 and DNA complex structure
分子名称: DNA (5'-D(*CP*CP*TP*CP*AP*CP*TP*AP*GP*CP*GP*CP*CP*CP*CP*CP*TP*GP*CP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*GP*GP*CP*GP*CP*TP*AP*GP*TP*GP*AP*GP*G)-3'), Transcriptional repressor CTCF, ...
著者Hashimoto, H, Wang, D, Cheng, X.
登録日2016-08-16
公開日2017-05-24
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.199 Å)
主引用文献Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA.
Mol. Cell, 66, 2017
1TNZ
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BU of 1tnz by Molmil
Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a RRCVLL Peptide Derived from Cdc42 splice isoform-2
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE, CHLORIDE ION, ...
著者Reid, T.S, Terry, K.L, Casey, P.J, Beese, L.S.
登録日2004-06-11
公開日2004-11-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystallographic analysis of CaaX prenyltransferases complexed with substrates defines rules of protein substrate selectivity.
J.Mol.Biol., 343, 2004
1U7L
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BU of 1u7l by Molmil
Crystal Structure of subunit C (vma5p) of the yeast V-ATPase
分子名称: L(+)-TARTARIC ACID, Vacuolar ATP synthase subunit C
著者Nelson, N, Frolow, F, Drory, O.
登録日2004-08-04
公開日2004-11-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of yeast V-ATPase subunit C reveals its stator function
Embo Rep., 5, 2004
5T4B
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BU of 5t4b by Molmil
Human DPP4 in complex with a ligand 34a
分子名称: 2-[(3R)-3-aminopiperidin-1-yl]-3-(but-2-yn-1-yl)-5-[(4-methylquinazolin-2-yl)methyl]-3H-imidazo[2,1-b]purin-4(5H)-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Scapin, G.
登録日2016-08-29
公開日2016-10-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Scaffold-hopping from xanthines to tricyclic guanines: A case study of dipeptidyl peptidase 4 (DPP4) inhibitors.
Bioorg.Med.Chem., 24, 2016
5T8W
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BU of 5t8w by Molmil
Cytochrome c - calixarene free
分子名称: CHLORIDE ION, Cyc1p, HEME C
著者Doolan, A.M, Rennie, M.L, Crowley, P.B.
登録日2016-09-08
公開日2017-11-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Protein Recognition by Functionalized Sulfonatocalix[4]arenes.
Chemistry, 24, 2018
5T4E
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BU of 5t4e by Molmil
Human DPP4 in complex with ligand 19a
分子名称: 2-[(3R)-3-aminopiperidin-1-yl]-3-(but-2-yn-1-yl)-6-[(4-methylquinazolin-2-yl)methyl]-6,7,8,9-tetrahydropyrimido[2,1-b]purin-4(3H)-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Scapin, G.
登録日2016-08-29
公開日2016-10-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Scaffold-hopping from xanthines to tricyclic guanines: A case study of dipeptidyl peptidase 4 (DPP4) inhibitors.
Bioorg.Med.Chem., 24, 2016
5SWL
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BU of 5swl by Molmil
Crystal Structure of ATPase delta1-79 Spa47 E188A
分子名称: Probable ATP synthase SpaL/MxiB, SULFATE ION
著者Morales, Y, Johnson, S.J, Burgess, J.L, Burgess, R.A, Dickenson, N.E.
登録日2016-08-08
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Biochemical Characterization of Spa47 Provides Mechanistic Insight into Type III Secretion System ATPase Activation and Shigella Virulence Regulation.
J. Biol. Chem., 291, 2016
1TR8
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BU of 1tr8 by Molmil
Crystal Structure of archaeal Nascent Polypeptide-associated Complex (aeNAC)
分子名称: conserved protein (MTH177)
著者Spreter, T, Pech, M, Beatrix, B.
登録日2004-06-21
公開日2005-02-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献The crystal structure of archaeal nascent polypeptide-associated complex (NAC) reveals a unique fold and the presence of a UBA domain
J.Biol.Chem., 280, 2005
5SXV
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BU of 5sxv by Molmil
X-ray structure of 2-bromoethanol bound to a pentameric ligand gated ion channel (ELIC) in a resting state
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-BROMOETHANOL, Cys-loop ligand-gated ion channel
著者Chen, Q, Kinde, M, Cohen, A, Xu, Y, Tang, P.
登録日2016-08-10
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural Basis of Alcohol Inhibition of the Pentameric Ligand-Gated Ion Channel ELIC.
Structure, 25, 2017
1UBG
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BU of 1ubg by Molmil
MsREcA-dATP complex
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, RecA
著者Datta, S, Krishna, R, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M.
登録日2003-04-04
公開日2003-07-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes
J.BACTERIOL., 185, 2003
5T25
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BU of 5t25 by Molmil
Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE, SODIUM ION
著者Chooback, L, Thomas, L.M, Karsten, W.E, Fleming, C.D, Seabourn, P.
登録日2016-08-23
公開日2017-03-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
To Be Published
1U3H
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BU of 1u3h by Molmil
Crystal structure of mouse TCR 172.10 complexed with MHC class II I-Au molecule at 2.4 A
分子名称: H-2 class II histocompatibility antigen, A-U alpha chain, A-U beta chain, ...
著者Maynard, J, Petersson, K, Wilson, D.H, Adams, E.J, Blondelle, S.E, Boulanger, M.J, Wilson, D.B, Garcia, K.C.
登録日2004-07-21
公開日2005-05-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structure of an autoimmune T cell receptor complexed with class II peptide-MHC: insights into MHC bias and antigen specificity
Immunity, 22, 2005
1UFN
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BU of 1ufn by Molmil
Solution structure of the SAND domain of the putative nuclear protein homolog (5830484A20Rik)
分子名称: putative nuclear protein homolog 5830484A20Rik
著者Tochio, N, Kobayashi, N, Koshiba, S, Kigawa, T, Inoue, M, Shirouzu, M, Terada, T, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Matsuo, Y, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-02
公開日2004-06-22
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the SAND domain of the putative nuclear protein homolog (5830484A20Rik)
To be Published
1TNN
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Tertiary structure of an immunoglobulin-like domain from the giant muscle protein titin: a new member of the I set
分子名称: TITIN MODULE M5
著者Pfuhl, M, Pastore, A.
登録日1995-01-17
公開日1995-04-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Tertiary structure of an immunoglobulin-like domain from the giant muscle protein titin: a new member of the I set.
Structure, 3, 1995
5SYP
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BU of 5syp by Molmil
Crystal Structure of ATPase delta1-79 Spa47 K165A
分子名称: Probable ATP synthase SpaL/MxiB, SULFATE ION
著者Morales, Y, Johnson, S.J, Burgess, J.L, Burgess, R.A, Dickenson, N.E.
登録日2016-08-11
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural and Biochemical Characterization of Spa47 Provides Mechanistic Insight into Type III Secretion System ATPase Activation and Shigella Virulence Regulation.
J. Biol. Chem., 291, 2016
5T4F
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BU of 5t4f by Molmil
Human DPP4 in complex with ligand 34p
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-({2-[(3R)-3-aminopiperidin-1-yl]-3-(but-2-yn-1-yl)-4-oxo-3,4-dihydro-5H-imidazo[2,1-b]purin-5-yl}methyl)benzonitrile, ...
著者Scapin, G.
登録日2016-08-29
公開日2016-10-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Scaffold-hopping from xanthines to tricyclic guanines: A case study of dipeptidyl peptidase 4 (DPP4) inhibitors.
Bioorg.Med.Chem., 24, 2016
5T73
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BU of 5t73 by Molmil
Crystal structure of S.aureus glyceraldehyde-3-phosphate-dehydrogenase (Gap) containing oxidized Cys151
分子名称: Glyceraldehyde-3-phosphate dehydrogenase 1, SODIUM ION
著者Pietrzyk-Brzezinska, A.J, Wahl, M.C.
登録日2016-09-02
公開日2016-12-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.599 Å)
主引用文献Protein S-Bacillithiolation Functions in Thiol Protection and Redox Regulation of the Glyceraldehyde-3-Phosphate Dehydrogenase Gap in Staphylococcus aureus Under Hypochlorite Stress.
Antioxid. Redox Signal., 28, 2018
1TTD
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BU of 1ttd by Molmil
SOLUTION-STATE STRUCTURE OF A DNA DODECAMER DUPLEX CONTAINING A CIS-SYN THYMINE CYCLOBUTANE DIMER
分子名称: DNA (5'-D(*CP*TP*TP*AP*AP*TP*TP*CP*GP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*CP*GP*AP*AP*(TTD)P*AP*AP*G)-3')
著者Mcateer, K, Jing, Y, Kao, J, Taylor, J.-S, Kennedy, M.A.
登録日1999-01-20
公開日1999-02-02
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution-state structure of a DNA dodecamer duplex containing a Cis-syn thymine cyclobutane dimer, the major UV photoproduct of DNA.
J.Mol.Biol., 282, 1998
1TTG
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THE THREE-DIMENSIONAL STRUCTURE OF THE TENTH TYPE III MODULE OF FIBRONECTIN: AN INSIGHT INTO RGD-MEDIATED INTERACTIONS
分子名称: FIBRONECTIN
著者Main, A.L, Harvey, T.S, Baron, M, Campbell, I.D.
登録日1993-07-14
公開日1994-01-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The three-dimensional structure of the tenth type III module of fibronectin: an insight into RGD-mediated interactions.
Cell(Cambridge,Mass.), 71, 1992
5T7M
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LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECEPTOR PCTA IN COMPLEX WITH L-TRP
分子名称: ACETATE ION, Chemotaxis protein, SODIUM ION, ...
著者Gavira, J.A, Rico-Jimenez, M, Ortega, A, Conejero-Muriel, M, Zhulin, I, Krell, T.
登録日2016-09-05
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
Mbio, 2020
1U22
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A. thaliana cobalamine independent methionine synthase
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, 2-AMINO-4-MERCAPTO-BUTYRIC ACID, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, ...
著者Ferrer, J.-L, Ravanel, S, Robert, M, Dumas, R.
登録日2004-07-16
公開日2004-09-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structures of cobalamin-independent methionine synthase complexed with zinc, homocysteine, and methyltetrahydrofolate
J.Biol.Chem., 279, 2004

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