PDB: 184427 件ウェブページステータス検索Chemie searchBIRD

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3IYD	Three-dimensional EM structure of an intact activator-dependent transcription initiation complex 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, DNA (98-MER), ... 著者 Hudson, B.P, Quispe, J, Lara, S, Kim, Y, Berman, H, Arnold, E, Ebright, R.H, Lawson, C.L. 登録日 2009-08-01 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (19.799999 Å) 主引用文献 Three-dimensional EM structure of an intact activator-dependent transcription initiation complex Proc.Natl.Acad.Sci.USA, 106, 2009
5DDK	Succinyl-CoA:acetate CoA-transferase (AarCH6-N347A) in complex with CoA 分子名称: Acetyl-CoA hydrolase, CHLORIDE ION, COENZYME A, ... 著者 Kappock, T.J, Mullins, E.A, Murphy, J.R. 登録日 2015-08-25 公開日 2016-05-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.127 Å) 主引用文献 Functional Dissection of the Bipartite Active Site of the Class I Coenzyme A (CoA)-Transferase Succinyl-CoA:Acetate CoA-Transferase. Front Chem, 4, 2016
5XQ5	NMR structure of the domain 5 of the E. coli ribosomal protein S1 分子名称: 30S ribosomal protein S1 著者 Lu, Y, Lim, L.Z, Song, J. 登録日 2017-06-06 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR structure of the domain 5 of the E. coli ribosomal protein S1 To Be Published
1PZJ	Cholera Toxin B-Pentamer Complexed With Nitrophenyl Galactoside 5 分子名称: Cholera Toxin B Subunit, N-{3-[4-(3-AMINO-PROPYL)-PIPERAZIN-1-YL]-PROPYL}-3-NITRO-5-(GALACTOPYRANOSYL)-ALPHA-BENZAMIDE, N-{3-[4-(3-AMINO-PROPYL)-PIPERAZIN-1-YL]-PROPYL}-3-NITRO-5-(GALACTOPYRANOSYL)-BETA-BENZAMIDE 著者 Mitchell, D.D, Pickens, J.C, Korotkov, K, Fan, E, Hol, W.G.J. 登録日 2003-07-11 公開日 2004-03-09 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 3,5-Substituted phenyl galactosides as leads in designing effective cholera toxin antagonists; synthesis and crystallographic studies Bioorg.Med.Chem., 12, 2004
5NKW	X-ray crystal structure of an AA9 LPMO 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ... 著者 Tandrup, T, Frandsen, K.E.H, Poulsen, J.-C.N, Lo Leggio, L. 登録日 2017-04-03 公開日 2017-11-01 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates. Nat Commun, 8, 2017
2HCJ	Trypsin-modified Elongation Factor Tu in complex with tetracycline 分子名称: GLYOXYLIC ACID, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Mui, S, Heffron, S.E, Aorora, A, Abel, K, Bergmann, E, Jurnak, F. 登録日 2006-06-16 公開日 2006-10-31 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Molecular complementarity between tetracycline and the GTPase active site of elongation factor Tu. Acta Crystallogr.,Sect.D, 62, 2006
2OBY	Crystal structure of Human P53 inducible oxidoreductase (TP53I3,PIG3) 分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative quinone oxidoreductase 著者 Porte, S, Valencia, E, Farres, J, Fita, I, Pike, A.C.W, Shafqat, N, Debreczeni, J, Johansson, C, Haroniti, A, Gileadi, O, Arrowsmith, C.H, Edwards, A, Weigelt, J, Sundstrom, M, von Delft, F, Oppermann, U, Pares, X. 登録日 2006-12-20 公開日 2007-01-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of human P53 inducible oxidoreductase (TP53I3, PIG3) To be Published
3E1L	Crystal structure of E. coli Bacterioferritin (BFR) soaked in phosphate with an alternative conformation of the unoccupied Ferroxidase centre (APO-BFR II). 分子名称: BACTERIOFERRITIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION 著者 Crow, A, Lawson, T, Lewin, A, Moore, G.R, Le Brun, N. 登録日 2008-08-04 公開日 2009-05-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for iron mineralization by bacterioferritin J.Am.Chem.Soc., 131, 2009
6BFM	Galactose-binding Lectin from Mytilus californianus, Isoform1 分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Hernandez-Santoyo, A, Garcia-Maldonado, E. 登録日 2017-10-26 公開日 2019-01-30 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.488 Å) 主引用文献 Glycan-induced oligomerization of a lectin from Mytilus californianus To Be Published
6BG0	Caspase-3 Mutant - D9A,D28A,S150D 分子名称: AC-ASP-GLU-VAL-ASP-CMK, AZIDE ION, Caspase-3, ... 著者 Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C. 登録日 2017-10-27 公開日 2018-02-21 最終更新日 2018-04-25 実験手法 X-RAY DIFFRACTION (2.125 Å) 主引用文献 Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem., 293, 2018
5NBD	PglK flippase in complex with inhibitory nanobody 分子名称: ADENOSINE-5'-DIPHOSPHATE, Nanobody, WlaB protein 著者 Perez, C, Pardon, E, Steyaert, J, Locher, K.P. 登録日 2017-03-01 公開日 2017-05-03 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Structural basis of inhibition of lipid-linked oligosaccharide flippase PglK by a conformational nanobody. Sci Rep, 7, 2017
5CZ8	Yeast 20S proteasome beta5-L(-49)S-K33A mutant in complex with Carfilzomib 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-07-31 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
5D0Z	Yeast 20S proteasome beta5-T1S mutant in complex with Carfilzomib 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-08-03 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
5NO1	Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI XZ407 (compound 5g) 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ... 著者 Pye, V.E, Cherepanov, P. 登録日 2017-04-10 公開日 2017-08-02 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure-Guided Optimization of HIV Integrase Strand Transfer Inhibitors. J. Med. Chem., 60, 2017
2OGA	X-ray crystal structure of S. venezuelae DesV in complex with ketimine intermediate 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid, ... 著者 Holden, H.M, Burgie, E.S. 登録日 2007-01-05 公開日 2007-05-15 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Molecular architecture of DesV from Streptomyces venezuelae: A PLP-dependent transaminase involved in the biosynthesis of the unusual sugar desosamine. Protein Sci., 16, 2007
5SX5	Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3 mutant S468R. 分子名称: 1,2-ETHANEDIOL, Epidermal growth factor receptor, GLYCEROL, ... 著者 Sickmier, E.A. 登録日 2016-08-09 公開日 2016-10-05 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The Panitumumab EGFR Complex Reveals a Binding Mechanism That Overcomes Cetuximab Induced Resistance. Plos One, 11, 2016
5N02	Crystal structure of the decarboxylase AibA/AibB C56S variant 分子名称: ACETATE ION, Glutaconate CoA-transferase family, subunit A, ... 著者 Bock, T, Luxenburger, E, Hoffmann, J, Schuetza, V, Feiler, C, Mueller, R, Blankenfeldt, W. 登録日 2017-02-02 公開日 2017-05-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 AibA/AibB Induces an Intramolecular Decarboxylation in Isovalerate Biosynthesis by Myxococcus xanthus. Angew. Chem. Int. Ed. Engl., 56, 2017
5CZ7	Yeast 20S proteasome beta5-T1A beta5-K81R double mutant in complex with Bortezomib, propeptide expressed in cis 分子名称: CHLORIDE ION, MAGNESIUM ION, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, ... 著者 Huber, E.M, Groll, M. 登録日 2015-07-31 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
2GRZ	5ns Photoproduct of the M37V mutant of Scapharca HbI 分子名称: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE 著者 Knapp, J.E, Pahl, R, Srajer, V, Royer Jr, W.E. 登録日 2006-04-25 公開日 2006-05-09 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Allosteric action in real time: Time-resolved crystallographic studies of a cooperative dimeric hemoglobin. Proc.Natl.Acad.Sci.Usa, 103, 2006
5D0X	Yeast 20S proteasome beta5-T1S mutant in complex with Bortezomib 分子名称: CHLORIDE ION, MAGNESIUM ION, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, ... 著者 Huber, E.M, Groll, M. 登録日 2015-08-03 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
1ODI	Purine nucleoside phosphorylase from Thermus Thermophilus 分子名称: ADENOSINE, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION 著者 Tahirov, T.H, Inagaki, E, Miyano, M. 登録日 2003-02-19 公開日 2003-02-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
5N5W	14-3-3 sigma in complex with TAZ pS89 peptide and fragment NV3 分子名称: 14-3-3 protein sigma, 4-[3,5-bis(chloranyl)pyridin-2-yl]oxyaniline, CALCIUM ION, ... 著者 Sijbesma, E, Leysen, S, Ottmann, C. 登録日 2017-02-14 公開日 2017-07-19 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Identification of Two Secondary Ligand Binding Sites in 14-3-3 Proteins Using Fragment Screening. Biochemistry, 56, 2017
4EAH	Crystal structure of the formin homology 2 domain of FMNL3 bound to actin 分子名称: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... 著者 Thompson, M.E, Heimsath, E.G, Gauvin, T.J, Higgs, H.N, Kull, F.J. 登録日 2012-03-22 公開日 2012-12-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 FMNL3 FH2-actin structure gives insight into formin-mediated actin nucleation and elongation. Nat.Struct.Mol.Biol., 20, 2013
4IHA	Crystal structure of rice DWARF14 (D14) in complex with a GR24 hydrolysis intermediate 分子名称: (2R,3R)-2,4,4-trihydroxy-3-methylbutanal, Dwarf 88 esterase 著者 Zhou, X.E, Zhao, L.-H, Wu, Z.-S, Yi, W, Li, S, Li, Y, Xu, Y, Xu, T.-H, Liu, Y, Chen, R.-Z, Kovach, A, Kang, Y, Hou, L, He, Y, Zhang, C, Melcher, K, Xu, H.E. 登録日 2012-12-18 公開日 2013-01-23 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal structures of two phytohormone signal-transducing alpha / beta hydrolases: karrikin-signaling KAI2 and strigolactone-signaling DWARF14. Cell Res., 23, 2013
6CH0	Structure of the Quorum Quenching lactonase from Alicyclobacillus acidoterrestris bound to a glycerol molecule 分子名称: 1,2-ETHANEDIOL, Beta-lactamase, COBALT (II) ION, ... 著者 Bergonzi, C, Schwab, M, Naik, T, Daude, D, Chabriere, E, Elias, M. 登録日 2018-02-21 公開日 2018-08-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural and Biochemical Characterization of AaL, a Quorum Quenching Lactonase with Unusual Kinetic Properties. Sci Rep, 8, 2018

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