Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3K9B
DownloadVisualize
BU of 3k9b by Molmil
Crystal structure of human liver carboxylesterase 1 (hCE1) in covalent complex with the nerve agent Cyclosarin (GF)
分子名称: Liver carboxylesterase 1, cyclohexyl (S)-methylphosphonofluoridoate
著者Hemmert, A.C, Redinbo, M.R.
登録日2009-10-15
公開日2010-01-19
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Human carboxylesterase 1 stereoselectively binds the nerve agent cyclosarin and spontaneously hydrolyzes the nerve agent sarin.
Mol.Pharmacol., 77, 2010
8UX1
DownloadVisualize
BU of 8ux1 by Molmil
Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
分子名称: 153-bp Widom 601 DNA forward strand, 153-bp Widom 601 DNA reverse strand, GTP-binding nuclear protein Ran, ...
著者Huang, S.K, Rubinstein, J.L, Kay, L.E.
登録日2023-11-08
公開日2023-11-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
To Be Published
5E7P
DownloadVisualize
BU of 5e7p by Molmil
Crystal Structure of MSMEG_0858 (Uniprot A0QQS4), a AAA ATPase.
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein Cdc48, GLYCEROL, ...
著者Unciulac-Carp, M, Smith, P, Shuman, S.
登録日2015-10-12
公開日2016-08-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.507 Å)
主引用文献Crystal Structure and Biochemical Characterization of a Mycobacterium smegmatis AAA-Type Nucleoside Triphosphatase Phosphohydrolase (Msm0858).
J.Bacteriol., 198, 2016
5OAI
DownloadVisualize
BU of 5oai by Molmil
Structure of MDM2 with low molecular weight inhibitor
分子名称: 3-[(1~{R})-2-(~{tert}-butylamino)-1-[methanoyl-[[3,4,5-tris(fluoranyl)phenyl]methyl]amino]-2-oxidanylidene-ethyl]-6-chloranyl-1~{H}-indole-2-carboxylic acid, E3 ubiquitin-protein ligase Mdm2
著者Twarda-Clapa, A, Neochoritis, C.G, Grudnik, P, Dubin, G, Domling, A, Holak, T.A.
登録日2017-06-22
公開日2019-02-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A fluorinated indole-based MDM2 antagonist selectively inhibits the growth of p53wtosteosarcoma cells.
Febs J., 286, 2019
6DU5
DownloadVisualize
BU of 6du5 by Molmil
Crystal structure of hMettl16 catalytic domain in complex with MAT2A 3'UTR hairpin 6
分子名称: U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase, hp6-RNA (25-MER)
著者Doxtader, K, Wang, P, Nam, Y.
登録日2018-06-19
公開日2018-09-26
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.006 Å)
主引用文献Structural Basis for Regulation of METTL16, an S-Adenosylmethionine Homeostasis Factor.
Mol. Cell, 71, 2018
7Y5V
DownloadVisualize
BU of 7y5v by Molmil
Cryo-EM structure of the dimeric human CAF1LC-H3-H4 complex
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ...
著者Liu, C.P, Yu, C, Yu, Z.Y, Xu, R.M.
登録日2022-06-17
公開日2023-08-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
4PH4
DownloadVisualize
BU of 4ph4 by Molmil
The crystal structure of Human VPS34 in complex with PIK-III
分子名称: 4'-(cyclopropylmethyl)-N~2~-(pyridin-4-yl)-4,5'-bipyrimidine-2,2'-diamine, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3
著者Knapp, M.S, Elling, R.A.
登録日2014-05-04
公開日2014-10-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Selective VPS34 inhibitor blocks autophagy and uncovers a role for NCOA4 in ferritin degradation and iron homeostasis in vivo.
Nat.Cell Biol., 16, 2014
8CXL
DownloadVisualize
BU of 8cxl by Molmil
Structure of NapH3, a vanadium-dependent haloperoxidase homolog catalyzing the stereospecific alpha-hydroxyketone rearrangement reaction in napyradiomycin biosynthesis
分子名称: CHLORIDE ION, MAGNESIUM ION, NapH3
著者Chen, P.Y.-T, Chekan, J.R, Moore, B.S.
登録日2022-05-21
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural Basis of Stereospecific Vanadium-Dependent Haloperoxidase Family Enzymes in Napyradiomycin Biosynthesis.
Biochemistry, 61, 2022
8D4I
DownloadVisualize
BU of 8d4i by Molmil
Structure of Y430F D-ornithine/D-lysine decarboxylase complex with putrescine
分子名称: 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Phillips, R.S, Nguyen Hoang, K.N.
登録日2022-06-02
公開日2022-11-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献The Y430F mutant of Salmonella d-ornithine/d-lysine decarboxylase has altered stereospecificity and a putrescine allosteric activation site.
Arch.Biochem.Biophys., 731, 2022
8D5R
DownloadVisualize
BU of 8d5r by Molmil
Structure of Y430F D-ornithine/D-lysine decarboxylase complex with D-ornithine
分子名称: 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ACETATE ION, ...
著者Phillips, R.S, Nguyen Hoang, K.N.
登録日2022-06-06
公開日2022-11-16
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献The Y430F mutant of Salmonella d-ornithine/d-lysine decarboxylase has altered stereospecificity and a putrescine allosteric activation site.
Arch.Biochem.Biophys., 731, 2022
8D2Y
DownloadVisualize
BU of 8d2y by Molmil
Y430F mutant of D-ornithine/D-lysine decarboxylase
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ...
著者Phillips, R.S, Nguyen Hoang, K.N.
登録日2022-05-31
公開日2022-11-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献The Y430F mutant of Salmonella d-ornithine/d-lysine decarboxylase has altered stereospecificity and a putrescine allosteric activation site.
Arch.Biochem.Biophys., 731, 2022
6DU4
DownloadVisualize
BU of 6du4 by Molmil
Crystal structure of hMettl16 catalytic domain in complex with MAT2A 3'UTR hairpin 1
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase, ...
著者Doxtader, K, Wang, P, Nam, Y.
登録日2018-06-19
公開日2018-09-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis for Regulation of METTL16, an S-Adenosylmethionine Homeostasis Factor.
Mol. Cell, 71, 2018
7ZI4
DownloadVisualize
BU of 7zi4 by Molmil
Cryo-EM structure of the human INO80 complex bound to a WT nucleosome
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, BERYLLIUM TRIFLUORIDE ION, ...
著者Vance, N.R, Ayala, R, Willhoft, O, Tvardovskiy, A, McCormack, E.A, Bartke, T, Zhang, X, Wigley, D.B.
登録日2022-04-07
公開日2023-04-19
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of the human INO80 complex bound to a WT nucleosome
To Be Published
2K7E
DownloadVisualize
BU of 2k7e by Molmil
NMR structure of the human tRNALys3 bound to the HIV genome Loop I
分子名称: RNA (5'-R(*CP*UP*(SUR)P*UP*UP*AP*AP*(PSU)P*CP*UP*GP*C)-3'), RNA (5'-R(*GP*CP*GP*GP*UP*GP*UP*AP*AP*AP*AP*G)-3')
著者Bilbille, Y, Vendeix, F.P.A, Guenther, R, Malkiewicz, A, Ariza, X, Vilarrasa, J, Agris, P.
登録日2008-08-09
公開日2008-10-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The structure of the human tRNALys3 anticodon bound to the HIV genome is stabilized by modified nucleosides and adjacent mismatch base pairs.
Nucleic Acids Res., 37, 2009
7VRX
DownloadVisualize
BU of 7vrx by Molmil
Pad-1 in the absence of substrate
分子名称: Aminotransferase, SULFATE ION
著者Choi, M, Rhee, S.
登録日2021-10-25
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96634674 Å)
主引用文献Structural and biochemical basis for the substrate specificity of Pad-1, an indole-3-pyruvic acid aminotransferase in auxin homeostasis.
J.Struct.Biol., 214, 2022
7Y5K
DownloadVisualize
BU of 7y5k by Molmil
Crystal structure of human CAF-1 core complex in spacegroup C2221
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, GLYCEROL, ...
著者Liu, C.P, Wang, M.Z, Xu, R.M.
登録日2022-06-17
公開日2023-08-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.48 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
7Y5O
DownloadVisualize
BU of 7y5o by Molmil
Crystal structure of human CAF-1 core complex in spacegroup P21
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, GLYCEROL, ...
著者Liu, C.P, Wang, M.Z, Xu, R.M.
登録日2022-06-17
公開日2023-08-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.57 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
7Y5L
DownloadVisualize
BU of 7y5l by Molmil
Crystal structure of human CAF-1 core complex in spacegroup C2
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, GLYCEROL, ...
著者Liu, C.P, Wang, M.Z, Xu, R.M.
登録日2022-06-17
公開日2023-08-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
2L2N
DownloadVisualize
BU of 2l2n by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for the first dsRBD of protein HYL1
分子名称: Hyponastic leave 1
著者Rasia, R.M, Mateos, J.L, Bologna, N.G, Burdisso, P, Imbert, L, Palatnik, J.F, Boisbouvier, J.
登録日2010-08-23
公開日2010-09-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and RNA Interactions of the Plant MicroRNA Processing-Associated Protein HYL1.
Biochemistry, 49, 2010
2MCO
DownloadVisualize
BU of 2mco by Molmil
Structural studies on dinuclear ruthenium(II) complexes that bind diastereoselectively to an anti-parallel folded human telomere sequence
分子名称: SODIUM ION, human telomere quadruplex, tetrakis(2,2'-bipyridine-kappa~2~N~1~,N~1'~)(mu-tetrapyrido[3,2-a:2',3'-c:3'',2''-h:2''',3'''-j]phenazine-1kappa~2~N~4~,N~5~:2kappa~2~N~13~,N~14~)diruthenium(4+) L enantiomer
著者Williamson, M.P, Wilson, T, Thomas, J.A, Felix, V, Costa, P.J.
登録日2013-08-22
公開日2013-10-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to an Antiparallel Folded Human Telomere Sequence.
J.Med.Chem., 56, 2013
2MCC
DownloadVisualize
BU of 2mcc by Molmil
Structural studies on dinuclear ruthenium(II) complexes that bind diastereoselectively to an anti-parallel folded human telomere sequence
分子名称: human_telomere_quadruplex, tetrakis(2,2'-bipyridine-kappa~2~N~1~,N~1'~)(mu-tetrapyrido[3,2-a:2',3'-c:3'',2''-h:2''',3'''-j]phenazine-1kappa~2~N~4~,N~5~:2kappa~2~N~13~,N~14~)diruthenium(4+)
著者Williamson, M.P, Wilson, T, Thomas, J.A, Felix, V, Costa, P.J.
登録日2013-08-18
公開日2013-10-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to an Antiparallel Folded Human Telomere Sequence.
J.Med.Chem., 56, 2013
2L2M
DownloadVisualize
BU of 2l2m by Molmil
Solution structure of the second dsRBD of HYL1
分子名称: Hyponastic leave 1
著者Rasia, R.M, Mateos, J.L, Bologna, N.G, Burdisso, P, Imbert, L, Palatnik, J.F, Boisbouvier, J.
登録日2010-08-22
公開日2010-09-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and RNA Interactions of the Plant MicroRNA Processing-Associated Protein HYL1.
Biochemistry, 49, 2010
2O5F
DownloadVisualize
BU of 2o5f by Molmil
Crystal Structure of DR0079 from Deinococcus radiodurans at 1.9 Angstrom Resolution
分子名称: Putative Nudix hydrolase DR_0079
著者Kennedy, M.A, Buchko, G.W, Ni, S, Robinson, H.
登録日2006-12-05
公開日2007-12-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Functional and Structural Characterization of DR_0079 from Deinococcus radiodurans, a Novel Nudix Hydrolase with a Preference for Cytosine (Deoxy)ribonucleoside 5'-Di- and Triphosphates.
Biochemistry, 47, 2008
8BCH
DownloadVisualize
BU of 8bch by Molmil
Human Brr2 Helicase Region in complex with Sulfaguanidine
分子名称: 1-(4-aminophenyl)sulfonylguanidine, U5 small nuclear ribonucleoprotein 200 kDa helicase
著者Vester, K, Loll, B, Wahl, M.C.
登録日2022-10-15
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Conformation-dependent ligand hot spots in the spliceosomal RNA helicase BRR2.
Acta Crystallogr D Struct Biol, 79, 2023
6XNV
DownloadVisualize
BU of 6xnv by Molmil
CRYSTAL STRUCTURE OF LISTERIA MONOCYTOGENES CBPB PROTEIN (LMO1009) IN COMPLEX WITH C-DI-AMP
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CBS domain-containing protein
著者Luo, S, Tong, L.
登録日2020-07-04
公開日2020-09-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献(p)ppGpp and c-di-AMP Homeostasis Is Controlled by CbpB in Listeria monocytogenes.
Mbio, 11, 2020

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon