PDB: 45566 件ウェブページステータス検索Chemie searchBIRD

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7CM1	Neuraminidase from the Wuhan Asiatic toad influenza virus 分子名称: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, CALCIUM ION, Neuraminidase 著者 Wang, J. 登録日 2020-07-23 公開日 2020-11-18 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Lattice-translocation defects in specific crystals of the catalytic head domain of influenza neuraminidase. Acta Crystallogr D Struct Biol, 76, 2020
5B2P	Crystal structure of Francisella novicida Cas9 in complex with sgRNA and target DNA (TGA PAM) 分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ... 著者 Hirano, H, Nishimasu, H, Nakane, T, Ishitani, R, Nureki, O. 登録日 2016-02-01 公開日 2016-03-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure and Engineering of Francisella novicida Cas9 Cell, 164, 2016
7OV2	Crystal structure of pig purple acid phosphatase in complex with L-glutamine, (poly)ethylene glycol fragments and glycerol 分子名称: 1,2-ETHANEDIOL, CITRIC ACID, FE (III) ION, ... 著者 Feder, D, McGeary, R.P, Guddat, L.W, Schenk, G. 登録日 2021-06-14 公開日 2022-01-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Rational Design of Potent Inhibitors of a Metallohydrolase Using a Fragment-Based Approach. Chemmedchem, 16, 2021
4IJ7	Crystal structure of Odorant Binding Protein 48 from Anopheles gambiae (AgamOBP48) with PEG 分子名称: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, Odorant binding protein-8, SODIUM ION 著者 Zographos, S.E, Tsitsanou, K.E, Drakou, C.E. 登録日 2012-12-21 公開日 2013-10-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal and Solution Studies of the "Plus-C" Odorant-binding Protein 48 from Anopheles gambiae: CONTROL OF BINDING SPECIFICITY THROUGH THREE-DIMENSIONAL DOMAIN SWAPPING. J.Biol.Chem., 288, 2013
6HYX	THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL MUTANT Y197F-P250C 分子名称: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Proton-gated ion channel, ... 著者 Hu, H.D, Delarue, M. 登録日 2018-10-22 公開日 2018-12-19 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4XCZ	X-ray structure of the N-formyltransferase QdtF from Providencia alcalifaciens in complex with TDP-Qui3n and N5-THF 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid, ... 著者 Thoden, J.B, Woodford, C.R, Holden, H.M. 登録日 2014-12-18 公開日 2015-01-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 New Role for the Ankyrin Repeat Revealed by a Study of the N-Formyltransferase from Providencia alcalifaciens. Biochemistry, 54, 2015
7OP6	Bacteroides thetaiotaomicron mannosidase GH2 with beta-manno-configured cyclophellitol aziridine 分子名称: (1~{R},2~{R},3~{S},4~{R},5~{R},6~{R})-5-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3,4-triol, 1,2-ETHANEDIOL, BROMIDE ION, ... 著者 McGregor, N.G.S, Beenakker, T.J.M, Kuo, C, Wong, C, Offen, W.A, Armstrong, Z, Codee, J.D.C, Aerts, J.M.F.G, Florea, B.I, Overkleeft, H.S, Davies, G.J. 登録日 2021-05-29 公開日 2022-05-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases. Org.Biomol.Chem., 20, 2022
4XMX	Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with Bestatin 分子名称: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, Aminopeptidase N, GLYCEROL, ... 著者 Addlagatta, A, Gumpena, R, Kishor, C. 登録日 2015-01-15 公開日 2016-02-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with Bestatin To Be Published
4OKI	X-ray structure of the nucleotide-binding subdomain of the enoylreductase domain of PpsC from Mycobacterium tuberculosis 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Phthiocerol synthesis polyketide synthase type I PpsC, SODIUM ION 著者 Faille, A, Mourey, L, Pedelacq, J.D. 登録日 2014-01-22 公開日 2015-08-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Insights into the catalytic mechanism of the DH domain of the Mycobacterium tuberculosis polyketide synthase PpsC and architecture of the beta-carbon processing domains To be Published
6EMX	X-ray structure of the N15'C mutant of GLIC in complex with bromoform 分子名称: CHLORIDE ION, Proton-gated ion channel, SODIUM ION, ... 著者 Fourati, Z, Delarue, M. 登録日 2017-10-03 公開日 2018-06-20 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural Basis for a Bimodal Allosteric Mechanism of General Anesthetic Modulation in Pentameric Ligand-Gated Ion Channels. Cell Rep, 23, 2018
7OW7	EIF6-bound large subunit of the human ribosome 分子名称: 28S rRNA, 5.8S ribosomal RNA, 5S rRNA, ... 著者 Faille, A, Warren, A.J. 登録日 2021-06-16 公開日 2022-10-05 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Structure of human EIF6-bound large ribosomal subunit To Be Published
4IZM	Crystal structure of GltPh L66C-S300C mutant crosslinked with divalent mercury 分子名称: 425aa long hypothetical proton glutamate symport protein, ASPARTIC ACID, MERCURY (II) ION, ... 著者 Reyes, N, Boudker, O. 登録日 2013-01-30 公開日 2013-04-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Binding thermodynamics of a glutamate transporter homolog. Nat.Struct.Mol.Biol., 20, 2013
5U2T	Pre-catalytic ternary complex of Human DNA Polymerase Beta With Gapped DNA substrate incoming (-)FTC-TP and Ca2+. 分子名称: 10- MER PRIMER, 16- MER TEMPLATE, 5-MER PHOSPHORYLATED DOWNSTREAM PRIMER, ... 著者 Vyas, R, Suo, Z. 登録日 2016-11-30 公開日 2017-05-24 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Structural basis for the D-stereoselectivity of human DNA polymerase beta. Nucleic Acids Res., 45, 2017
4XTO	Crystal structure of the light-driven sodium pump KR2 in the pentameric red form, pH 5.6 分子名称: EICOSANE, SODIUM ION, Sodium pumping rhodopsin 著者 Gushchin, I, Shevchenko, V, Polovinkin, V, Gordeliy, V. 登録日 2015-01-23 公開日 2015-04-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of a light-driven sodium pump. Nat.Struct.Mol.Biol., 22, 2015
7P4J	Crystal structure of Autotaxin and tetrahydrocannabinol 分子名称: (6aR,10aR)-6,6,9-trimethyl-3-pentyl-6a,7,8,10a-tetrahydro-6H-benzo[c]chromen-1-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7alpha-hydroxycholesterol, ... 著者 Eymery, M.C, McCarthy, A.A, Hausmann, J. 登録日 2021-07-11 公開日 2022-12-28 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Linking medicinal cannabis to autotaxin-lysophosphatidic acid signaling. Life Sci Alliance, 6, 2023
6EF9	GspB Siglec domain 分子名称: FORMIC ACID, Platelet binding protein GspB - Siglec domain, SODIUM ION 著者 Iverson, T.M. 登録日 2018-08-16 公開日 2020-02-19 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation. Nat Commun, 13, 2022
7PJY	Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. 登録日 2021-08-24 公開日 2021-10-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural mechanism of GTPase-powered ribosome-tRNA movement. Nat Commun, 12, 2021
7PJS	Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. 登録日 2021-08-24 公開日 2021-10-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.35 Å) 主引用文献 Structural mechanism of GTPase-powered ribosome-tRNA movement Nat Commun, 12, 2021
3PNX	Crystal structure of a putative sulfurtransferase dsrE (Swol_2425) from Syntrophomonas wolfei str. Goettingen at 1.92 A resolution 分子名称: CHLORIDE ION, GLYCEROL, Putative sulfurtransferase dsrE, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2010-11-19 公開日 2010-12-15 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Crystal structure of a putative sulfurtransferase dsrE (Swol_2425) from Syntrophomonas wolfei str. Goettingen at 1.92 A resolution To be published
7PJV	Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. 登録日 2021-08-24 公開日 2021-10-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural mechanism of GTPase-powered ribosome-tRNA movement. Nat Commun, 12, 2021
7PES	Crystal Structure of Two-Domain Laccase mutant M199G from Streptomyces griseoflavus 分子名称: COPPER (II) ION, OXYGEN MOLECULE, SODIUM ION, ... 著者 Gabdulkhakov, A, Tishchenko, S, Kolyadenko, I. 登録日 2021-08-11 公開日 2022-01-19 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Engineering the Catalytic Properties of Two-Domain Laccase from Streptomyces griseoflavus Ac-993. Int J Mol Sci, 23, 2021
4IQL	Crystal Structure of Porphyromonas gingivalis Enoyl-ACP Reductase II (FabK) with cofactors NADPH and FMN 分子名称: Enoyl-(Acyl-carrier-protein) reductase II, FLAVIN MONONUCLEOTIDE, GLYCEROL, ... 著者 Hevener, K.E, Santarsiero, B.D, Su, P.-C, Boci, T, Truong, K, Johnson, M.E, Mehboob, S. 登録日 2013-01-11 公開日 2014-01-29 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.938 Å) 主引用文献 Structural characterization of Porphyromonas gingivalis enoyl-ACP reductase II (FabK). Acta Crystallogr F Struct Biol Commun, 74, 2018
7Q36	Crystal structure of KR2 sodium pump rhodopsin pressurized with krypton 分子名称: EICOSANE, HEXANE, KRYPTON, ... 著者 Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A. 登録日 2021-10-27 公開日 2022-04-27 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action. Commun Biol, 5, 2022
5TBA	Postcatalytic ternary complex of Human DNA Polymerase Beta with Gapped DNA substrate, incorporated (-)3TC and PPi. 分子名称: 10-MER PRIMER, 16-MER TEMPLATE, 5-MER PHOSPHORYLATED DOWNSTREAM PRIMER, ... 著者 Vyas, R, Suo, Z. 登録日 2016-09-11 公開日 2017-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Structural Insights into the Post-Chemistry Steps of Nucleotide Incorporation Catalyzed by a DNA Polymerase. J. Am. Chem. Soc., 139, 2017
4PA4	Structure of NavMS in complex with channel blocking compound 分子名称: BROMIDE ION, DODECAETHYLENE GLYCOL, HEGA-10, ... 著者 Naylor, C.E, Bagneris, C, Wallace, B.A. 登録日 2014-04-07 公開日 2014-06-04 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.02 Å) 主引用文献 Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism. Proc.Natl.Acad.Sci.USA, 111, 2014

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