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4IU1
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Crystal structure of Leishmania mexicana arginase in complex with inhibitor nor-NOHA
分子名称: Arginase, GLYCEROL, MANGANESE (II) ION, ...
著者D'Antonio, E.L, Ullman, B, Roberts, S.C, Gaur Dixit, U, Wilson, M.E, Hai, Y, Christianson, D.W.
登録日2013-01-19
公開日2013-01-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of arginase from Leishmania mexicana and implications for the inhibition of polyamine biosynthesis in parasitic infections.
Arch.Biochem.Biophys., 535, 2013
4AD1
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Structure of the GH99 endo-alpha-mannosidase from Bacteroides xylanisolvens
分子名称: GLYCOSYL HYDROLASE FAMILY 71
著者Thompson, A.J, Williams, R.J, Hakki, Z, Alonzi, D.S, Wennekes, T, Gloster, T.M, Songsrirote, K, Thomas-Oates, J.E, Wrodnigg, T.M, Spreitz, J, Stuetz, A.E, Butters, T.D, Williams, S.J, Davies, G.J.
登録日2011-12-21
公開日2012-02-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Mechanistic Insight Into N-Glycan Processing by Endo-Alpha-Mannosidase.
Proc.Natl.Acad.Sci.USA, 109, 2012
2NXL
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BU of 2nxl by Molmil
Structure of HIV-1 protease D25N complexed with the rt-rh analogue peptide GLY-ALA-GLU-VAL-PHE*TYR-VAL-ASP-GLY-ALA
分子名称: Analogue of RT-RH pol protease substrate peptide, PHOSPHATE ION, PROTEASE RETROPEPSIN
著者Prabu-Jeyabalan, M, Nalivaika, E, Schiffer, C.A.
登録日2006-11-17
公開日2007-09-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Computational design and experimental study of tighter binding peptides to an inactivated mutant of HIV-1 protease
Proteins, 70, 2007
5M3Z
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BU of 5m3z by Molmil
Crystal structure of Citrobacter freundii methionine gamma-lyase with C115H replacement in the complex with L-norleucine
分子名称: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO-HEXANOIC ACID, Methionine gamma-lyase, NORLEUCINE, ...
著者Revtovich, S.V, Nikulin, A.D, Anufrieva, N.V, Morozova, E.A, Demidkina, T.V.
登録日2016-10-17
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of mutant form Cys115His of Citrobacter freundii methionine gamma-lyase complexed with l-norleucine.
Biochim. Biophys. Acta, 1865, 2017
3FUX
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BU of 3fux by Molmil
T. thermophilus 16S rRNA A1518 and A1519 methyltransferase (KsgA) in complex with 5'-methylthioadenosine in space group P212121
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Dimethyladenosine transferase
著者Demirci, H, Belardinelli, R, Seri, E, Gregory, S.T, Gualerzi, C, Dahlberg, A.E, Jogl, G.
登録日2009-01-14
公開日2009-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural rearrangements in the active site of the Thermus thermophilus 16S rRNA methyltransferase KsgA in a binary complex with 5'-methylthioadenosine.
J.Mol.Biol., 388, 2009
7LU8
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BU of 7lu8 by Molmil
Structure of the cryptic HMA domain of the human copper transporter ATP7A
分子名称: Copper-transporting ATPase 1
著者Lee, W, Uhlemann, E.E, Tonelli, M, Dmitriev, O.Y.
登録日2021-02-21
公開日2021-09-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献At sixes and sevens: cryptic domain in the metal binding chain of the human copper transporter ATP7A.
Biophys.J., 120, 2021
5ELB
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BU of 5elb by Molmil
Cholera toxin classical B-pentamer in complex with Lewis-y
分子名称: BICINE, CALCIUM ION, Cholera enterotoxin B subunit, ...
著者Heggelund, J.E, Burschowsky, D, Krengel, U.
登録日2015-11-04
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献High-Resolution Crystal Structures Elucidate the Molecular Basis of Cholera Blood Group Dependence.
Plos Pathog., 12, 2016
1CP5
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BU of 1cp5 by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN L104F MUTANT (MET)
分子名称: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Liong, E.C, Phillips Jr, G.N.
登録日1999-06-07
公開日1999-06-14
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Waterproofing the heme pocket. Role of proximal amino acid side chains in preventing hemin loss from myoglobin.
J.Biol.Chem., 276, 2001
5EI4
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BU of 5ei4 by Molmil
First domain of human bromodomain BRD4 in complex with inhibitor 8-(5-Amino-1H-[1,2,4]triazol-3-ylsulfanylmethyl)-3-(4-chlorobenzyl)-7-ethyl-3,7-dihydropurine-2,6-dione
分子名称: 1,2-ETHANEDIOL, 8-[(3-azanyl-1~{H}-1,2,4-triazol-5-yl)sulfanylmethyl]-3-[(4-chlorophenyl)methyl]-7-ethyl-purine-2,6-dione, Bromodomain-containing protein 4
著者Raux, B, Rebuffet, E, Betzi, S, Morelli, X.
登録日2015-10-29
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Exploring Selective Inhibition of the First Bromodomain of the Human Bromodomain and Extra-terminal Domain (BET) Proteins.
J.Med.Chem., 59, 2016
7M1D
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Structural and functional studies about scorpine showed the presence of blocking channel and cytolytic activities as well as two different structural domains
分子名称: Scorpine
著者del Rio-Portilla, F, Lopez-Giraldo, A.E.
登録日2021-03-12
公開日2022-01-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural and functional studies of scorpine: A channel blocker and cytolytic peptide.
Toxicon, 222, 2022
3RAF
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BU of 3raf by Molmil
Quinazolinedione-DNA cleavage complex of type IV topoisomerase from S. pneumoniae
分子名称: 3-amino-7-{(3R)-3-[(1S)-1-aminoethyl]pyrrolidin-1-yl}-1-cyclopropyl-6-fluoro-8-methylquinazoline-2,4(1H,3H)-dione, 5'-D(*CP*AP*TP*GP*AP*AP*T)-3', 5'-D(*CP*GP*TP*GP*CP*AP*T)-3', ...
著者Laponogov, I, Pan, X.-S, Veselkov, D.A, McAuley, K.E, Fisher, L.M, Sanderson, M.R.
登録日2011-03-28
公開日2012-03-28
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Inhibitor-stabilised cleavage complexes of topoisomerase IIa: structural analysis of drug-dependent inter- and intramolecular interactions
To be Published
2K1L
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BU of 2k1l by Molmil
NMR structures of dimeric transmembrane domain of the receptor tyrosine kinase EphA1 in lipid bicelles at pH 6.3
分子名称: Ephrin type-A receptor 1
著者Mayzel, M.L, Bocharov, E.V, Arseniev, A.S, Goncharuk, M.V.
登録日2008-03-07
公開日2008-09-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Spatial Structure and pH-dependent Conformational Diversity of Dimeric Transmembrane Domain of the Receptor Tyrosine Kinase EphA1.
J.Biol.Chem., 283, 2008
5EN0
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BU of 5en0 by Molmil
Crystal Structure of T94I rhodopsin mutant
分子名称: ACETATE ION, Guanine nucleotide-binding protein G(t) subunit alpha-3, PALMITIC ACID, ...
著者Singhal, A, Guo, Y, Matkovic, M, Schertler, G, Deupi, X, Yan, E, Standfuss, J.
登録日2015-11-08
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Structural role of the T94I rhodopsin mutation in congenital stationary night blindness.
Embo Rep., 17, 2016
1Z8Y
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BU of 1z8y by Molmil
Mapping the E2 Glycoprotein of Alphaviruses
分子名称: Capsid protein C, Spike glycoprotein E1, Spike glycoprotein E2
著者Mukhopadhyay, S, Zhang, W, Gabler, S, Chipman, P.R, Strauss, E.G, Strauss, J.H, Baker, T.S, Kuhn, R.J, Rossmann, M.G.
登録日2005-03-31
公開日2006-02-07
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Mapping the structure and function of the E1 and E2 glycoproteins in alphaviruses.
Structure, 14, 2006
7MSF
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BU of 7msf by Molmil
MS2 PROTEIN CAPSID/RNA COMPLEX
分子名称: 5'-R(*UP*CP*GP*CP*CP*AP*AP*CP*AP*GP*GP*CP*GP*G)-3', MS2 PROTEIN CAPSID
著者Rowsell, S, Stonehouse, N.J, Convery, M.A, Adams, C.J, Ellington, A.D, Hirao, I, Peabody, D.S, Stockley, P.G, Phillips, S.E.V.
登録日1998-05-20
公開日1998-11-11
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of a series of RNA aptamers complexed to the same protein target.
Nat.Struct.Biol., 5, 1998
3FT2
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BU of 3ft2 by Molmil
Crystal Structure of a citrulline peptide variant of the minor histocompatibility peptide HA-1 in complex with HLA-A2
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
著者Reiser, J.-B, Gras, S, Chouquet, A, Le Gorrec, M, Spierings, E, Goulmy, E, Housset, D.
登録日2009-01-12
公開日2009-04-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Steric hindrance and fast dissociation explain the lack of immunogenicity of the minor histocompatibility HA-1Arg Null allele.
J.Immunol., 182, 2009
6C73
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BU of 6c73 by Molmil
Tryptophan synthase Q114A mutant (internal aldimine state) in complex with N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) with cesium ion bound in the metal coordination site
分子名称: 1,2-ETHANEDIOL, 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE, CESIUM ION, ...
著者Hilario, E, Dunn, M.F, Mueller, L.J, Fan, L.
登録日2018-01-19
公開日2019-01-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Tryptophan synthase Q114A mutant (internal aldimine state) in complex with N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) with cesium ion bound in the metal coordination site.
To be Published
4A0Y
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BU of 4a0y by Molmil
Structure of the global transcription regulator FapR from Staphylococcus aureus
分子名称: CHLORIDE ION, TRANSCRIPTION FACTOR FAPR
著者Albanesi, D, Guerin, M.E, Buschiazzo, A, de Mendoza, D, Alzari, P.M.
登録日2011-09-13
公開日2012-09-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Basis for Feed-Forward Transcriptional Regulation of Membrane Lipid Homeostasis in Staphylococcus Aureus.
Plos Pathog., 9, 2013
1TRZ
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BU of 1trz by Molmil
CRYSTALLOGRAPHIC EVIDENCE FOR DUAL COORDINATION AROUND ZINC IN THE T3R3 HUMAN INSULIN HEXAMER
分子名称: CHLORIDE ION, INSULIN, SODIUM ION, ...
著者Ciszak, E, Smith, G.D.
登録日1993-11-19
公開日1994-01-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic evidence for dual coordination around zinc in the T3R3 human insulin hexamer.
Biochemistry, 33, 1994
5M83
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Translation initiation factor 4E in complex with (RP)-m2(7,2'O)GppSpA mRNA 5' cap analog
分子名称: Eukaryotic translation initiation factor 4E, GLYCEROL, [[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-sulfanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanyl-purin-7-ium-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl hydrogen phosphate
著者Warminski, M, Nowak, E, Kowalska, J, Jemielity, J, Nowotny, M.
登録日2016-10-28
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Translation initiation factor 4E in complex with (RP)-m2(7,2'O)GppSpA mRNA 5' cap analog
To Be Published
5MIM
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BU of 5mim by Molmil
Xray structure of human furin bound with the 2,5-dideoxystreptamine derived small molecule inhibitor 1n
分子名称: 1-[(1~{R},2~{R},4~{S},5~{S})-2,4-bis(4-carbamimidamidophenoxy)-5-[(4-carbamimidamidophenyl)amino]cyclohexyl]guanidine, CALCIUM ION, CHLORIDE ION, ...
著者Dahms, S.O, Guan-Sheng, J, Than, M.E.
登録日2016-11-28
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Studies Revealed Active Site Distortions of Human Furin by a Small Molecule Inhibitor.
ACS Chem. Biol., 12, 2017
3FT3
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BU of 3ft3 by Molmil
Crystal Structure of the minor histocompatibility peptide HA-1His in complex with HLA-A2
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
著者Reiser, J.-B, Gras, S, Chouquet, A, Le Gorrec, M, Spierings, E, Goulmy, E, Housset, D.
登録日2009-01-12
公開日2009-04-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Steric hindrance and fast dissociation explain the lack of immunogenicity of the minor histocompatibility HA-1Arg Null allele.
J.Immunol., 182, 2009
6CAJ
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BU of 6caj by Molmil
Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens
分子名称: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ...
著者Tsai, J.C, Miller-Vedam, L.E, Anand, A.A, Jaishankar, P, Nguyen, H.C, Renslo, A.R, Frost, A, Walter, P.
登録日2018-01-31
公開日2018-04-11
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of the nucleotide exchange factor eIF2B reveals mechanism of memory-enhancing molecule.
Science, 359, 2018
3RIT
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BU of 3rit by Molmil
Crystal structure of Dipeptide Epimerase from Methylococcus capsulatus complexed with Mg and dipeptide L-Arg-D-Lys
分子名称: ARGININE, D-LYSINE, Dipeptide epimerase, ...
著者Lukk, T, Sakai, A, Song, L, Gerlt, J.A, Nair, S.K.
登録日2011-04-14
公開日2011-04-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
1TPB
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BU of 1tpb by Molmil
OFFSET OF A CATALYTIC LESION BY A BOUND WATER SOLUBLE
分子名称: PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
著者Zhang, Z, Sugio, S, Komives, E.A, Liu, K.D, Knowles, J.R, Petsko, G.A, Ringe, D.
登録日1994-02-03
公開日1995-02-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structural basis for pseudoreversion of the E165D lesion by the secondary S96P mutation in triosephosphate isomerase depends on the positions of active site water molecules.
Biochemistry, 34, 1995

224004

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