PDB: 98225 件ウェブページステータス検索Chemie searchBIRD

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6FAX	Complex of Human CD40 Ectodomain with Lob 7.4 Fab 分子名称: Lob 7.4 heavy chain, Lob 7.4 light chain, Tumor necrosis factor receptor superfamily member 5 著者 Orr, C.M, Tews, I, Pearson, A.R. 登録日 2017-12-18 公開日 2018-02-07 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.99 Å) 主引用文献 Complex Interplay between Epitope Specificity and Isotype Dictates the Biological Activity of Anti-human CD40 Antibodies. Cancer Cell, 33, 2018
5WEL	GluA2 bound to antagonist ZK and GSG1L in digitonin, state 2 分子名称: Chimera of Glutamate receptor 2, Germ cell-specific gene 1-like protein, Digitonin, ... 著者 Twomey, E.C, Yelshanskaya, M.V, Grassucci, R.A, Frank, J, Sobolevsky, A.I. 登録日 2017-07-10 公開日 2017-08-02 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Channel opening and gating mechanism in AMPA-subtype glutamate receptors. Nature, 549, 2017
1LQY	Crystal Structure of Bacillus stearothermophilus Peptide Deformylase Complexed with Antibiotic Actinonin 分子名称: ACTINONIN, NICKEL (II) ION, PEPTIDE deformylase 2 著者 Mathieu, M, Mikol, V. 登録日 2002-05-14 公開日 2002-07-24 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The crystal structures of four peptide deformylases bound to the antibiotic actinonin reveal two distinct types: a platform for the structure-based design of antibacterial agents. J.Mol.Biol., 320, 2002
1O0S	Crystal Structure of Ascaris suum Malic Enzyme Complexed with NADH 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, NAD-dependent malic enzyme, TARTRONATE 著者 Rao, G.S, Coleman, D.E, Karsten, W.E, Cook, P.F, Harris, B.G. 登録日 2003-02-24 公開日 2003-07-22 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystallographic studies on Ascaris suum NAD-malic enzyme bound to reduced cofactor and identification of an effector site. J.Biol.Chem., 278, 2003
1A66	SOLUTION NMR STRUCTURE OF THE CORE NFATC1/DNA COMPLEX, 18 STRUCTURES 分子名称: CORE NFATC1, DNA (5'-D(*CP*AP*AP*TP*TP*TP*TP*CP*CP*TP*CP*G)-3'), DNA (5'-D(*CP*GP*AP*GP*GP*AP*AP*AP*AP*TP*TP*G)-3') 著者 Zhou, P, Sun, L.J, Doetsch, V, Wagner, G, Verdine, G.L. 登録日 1998-03-06 公開日 1998-06-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the core NFATC1/DNA complex. Cell(Cambridge,Mass.), 92, 1998
7AGL	crystal structure of the apo form of the N-acetylmuramyl-L-alanine amidase, Ami1, from Mycobacterium abscessus. 分子名称: N-acetylmuramoyl-L-alanine amidase, ZINC ION 著者 Blaise, M. 登録日 2020-09-23 公開日 2020-11-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Functional Characterization of the N -Acetylmuramyl-l-Alanine Amidase, Ami1, from Mycobacterium abscessus . Cells, 9, 2020
1TCC	THE SEQUENCE, CRYSTAL STRUCTURE DETERMINATION AND REFINEMENT OF TWO CRYSTAL FORMS OF LIPASE B FROM CANDIDA ANTARCTICA 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LIPASE, octyl beta-D-glucopyranoside 著者 Uppenberg, J, Jones, T.A. 登録日 1994-02-28 公開日 1994-05-31 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The sequence, crystal structure determination and refinement of two crystal forms of lipase B from Candida antarctica. Structure, 2, 1994
7AKI	ENAH EVH1 in complex with Ac-[2-Cl-F]-[ProM-2]-[ProM-1]-NH2 分子名称: (3~{S},7~{R},10~{R},13~{S})-4-[(3~{S},6~{R},8~{a}~{S})-1'-[(2~{S})-2-acetamido-3-(2-chlorophenyl)propanoyl]-5-oxidanylidene-spiro[1,2,3,8~{a}-tetrahydroindolizine-6,2'-pyrrolidine]-3-yl]carbonyl-2-oxidanylidene-1,4-diazatricyclo[8.3.0.0^{3,7}]tridec-8-ene-13-carboxamide, NITRATE ION, Protein enabled homolog 著者 Barone, M, Roske, Y. 登録日 2020-10-01 公開日 2020-11-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 Designed nanomolar small-molecule inhibitors of Ena/VASP EVH1 interaction impair invasion and extravasation of breast cancer cells. Proc.Natl.Acad.Sci.USA, 117, 2020
1O6Z	1.95 A resolution structure of (R207S,R292S) mutant of malate dehydrogenase from the halophilic archaeon Haloarcula marismortui (holo form) 分子名称: CHLORIDE ION, MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Irimia, A, Ebel, C, Madern, D, Richard, S.B, Cosenza, L.W, Zaccai, G, Vellieux, F.M.D. 登録日 2002-10-22 公開日 2003-02-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 The Oligomeric States of Haloarcula Marismortui Malate Dehydrogenase are Modulated by Solvent Components as Shown by Crystallographic and Biochemical Studies J.Mol.Biol., 326, 2003
1K2E	crystal structure of a nudix protein from Pyrobaculum aerophilum 分子名称: ACETIC ACID, GLYCEROL, NICKEL (II) ION, ... 著者 Wang, S, Mura, C, Sawaya, M.R, Cascio, D, Eisenberg, D. 登録日 2001-09-26 公開日 2002-04-03 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit beta-sheets. Acta Crystallogr.,Sect.D, 58, 2002
6GB2	Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit. 分子名称: 'Mitochondrial ribosomal protein L30, 'Mitochondrial ribosomal protein L55, 'Mitochondrial ribosomal protein L59, ... 著者 Kummer, E, Leibundgut, M, Boehringer, D, Ban, N. 登録日 2018-04-13 公開日 2018-08-08 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. Nature, 560, 2018
4YV3	Trimeric crystal structure of vimentin coil1B fragment 分子名称: CHLORIDE ION, SULFATE ION, Vimentin 著者 Chernyatina, A.A, Strelkov, S.V. 登録日 2015-03-19 公開日 2015-12-02 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 How to Study Intermediate Filaments in Atomic Detail. Meth. Enzymol., 568, 2016
1V4H	Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima F52A mutant 分子名称: SULFATE ION, octoprenyl-diphosphate synthase 著者 Guo, R.T, Kuo, C.J, Chou, C.C, Ko, T.P, Shr, H.L, Liang, P.H, Wang, A.H.-J. 登録日 2003-11-14 公開日 2004-03-02 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima and Mechanism of Product Chain Length Determination J.Biol.Chem., 279, 2004
1FUU	YEAST INITIATION FACTOR 4A 分子名称: YEAST INITIATION FACTOR 4A 著者 Caruthers, J.M, Johnson, E.R, McKay, D.B. 登録日 2000-09-15 公開日 2000-11-29 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase. Proc.Natl.Acad.Sci.USA, 97, 2000
2VHY	Crystal structure of apo L-alanine dehydrogenase from Mycobacterium tuberculosis 分子名称: ALANINE DEHYDROGENASE 著者 Agren, D, Schneider, G. 登録日 2007-11-26 公開日 2008-03-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding. J.Mol.Biol., 377, 2008
1JS3	Crystal structure of dopa decarboxylase in complex with the inhibitor carbidopa 分子名称: CARBIDOPA, DOPA decarboxylase, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Burkhard, P, Dominici, P, Borri-Voltattorni, C, Jansonius, J.N, Malashkevich, V.N. 登録日 2001-08-16 公開日 2001-10-26 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural insight into Parkinson's disease treatment from drug-inhibited DOPA decarboxylase. Nat.Struct.Biol., 8, 2001
2QHC	The Influence of I47A Mutation on Reduced Susceptibility to the Protease Inhibitor Lopinavir 分子名称: BETA-MERCAPTOETHANOL, N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE, PROTEASE RETROPEPSIN 著者 Brynda, J, Saskova, K.G, Kozisek, M, Lepsik, M, Machala, L, Konvalinka, J. 登録日 2007-07-02 公開日 2008-07-22 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.802 Å) 主引用文献 Enzymatic and structural analysis of the I47A mutation contributing to the reduced susceptibility to HIV protease inhibitor lopinavir. Protein Sci., 17, 2008
3UQ2	Crystal structure of the post-catalytic product complex of polymerase lambda with an rCMP inserted opposite a templating G and dAMP inserted opposite a templating T at the primer terminus. 分子名称: 5'-D(*CP*AP*GP*TP*AP)-R(P*CP*A)-3', 5'-D(*CP*GP*GP*CP*TP*GP*TP*AP*CP*TP*G)-3', 5'-D(P*GP*CP*CP*G)-3', ... 著者 Gosavi, R.A, Moon, A.F, Kunkel, T.A, Pedersen, L.C, Bebenek, K. 登録日 2011-11-18 公開日 2012-05-23 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 The catalytic cycle for ribonucleotide incorporation by human DNA Pol lambda Nucleic Acids Res., 40, 2012
1V4J	Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima V73Y mutant 分子名称: SULFATE ION, octoprenyl-diphosphate synthase 著者 Guo, R.T, Kuo, C.J, Chou, C.C, Ko, T.P, Shr, H.L, Liang, P.H, Wang, A.H.-J. 登録日 2003-11-14 公開日 2004-03-02 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima and Mechanism of Product Chain Length Determination J.Biol.Chem., 279, 2004
1LVL	THE REFINED STRUCTURE OF PSEUDOMONAS PUTIDA LIPOAMIDE DEHYDROGENASE COMPLEXED WITH NAD+ AT 2.45 ANGSTROMS RESOLUTION 分子名称: DIHYDROLIPOAMIDE DEHYDROGENASE, FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Mattevi, A, Hol, W.G.J. 登録日 1992-12-16 公開日 1994-01-31 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 The refined crystal structure of Pseudomonas putida lipoamide dehydrogenase complexed with NAD+ at 2.45 A resolution. Proteins, 13, 1992
5X2U	Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 80 mM phosphate pH 6.7. 分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Ohki, M, Park, S.-Y. 登録日 2017-02-02 公開日 2017-09-27 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.53 Å) 主引用文献 Direct observation of conformational population shifts in crystalline human hemoglobin. J. Biol. Chem., 292, 2017
5X2R	Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 10 mM phosphate pH 6.9. 分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Ohki, M, Park, S.-Y. 登録日 2017-02-02 公開日 2017-09-20 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Direct observation of conformational population shifts in crystalline human hemoglobin. J. Biol. Chem., 292, 2017
3HXF	Engineered RabGGTase in complex with a peptidomimetic inhibitor (compound 32) 分子名称: CALCIUM ION, Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ... 著者 Guo, Z, Alexandrov, K, Waldmann, H, Goody, R.S, Blankenfeldt, W. 登録日 2009-06-20 公開日 2009-09-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Design, synthesis, and characterization of Peptide-based rab geranylgeranyl transferase inhibitors J.Med.Chem., 52, 2009
3HXC	Engineered RabGGTase in complex with a peptidomimetic inhibitor (compound 8) 分子名称: CALCIUM ION, Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ... 著者 Guo, Z, Alexandrov, K, Waldmann, H, Goody, R.S, Blankenfeldt, W. 登録日 2009-06-20 公開日 2009-09-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Design, synthesis, and characterization of Peptide-based rab geranylgeranyl transferase inhibitors J.Med.Chem., 52, 2009
1TGB	CRYSTAL STRUCTURE OF BOVINE TRYPSINOGEN AT 1.8 ANGSTROMS RESOLUTION. II. CRYSTALLOGRAPHIC REFINEMENT, REFINED CRYSTAL STRUCTURE AND COMPARISON WITH BOVINE TRYPSIN 分子名称: CALCIUM ION, TRYPSINOGEN 著者 Bode, W, Fehlhammer, H, Huber, R. 登録日 1979-03-07 公開日 1979-06-13 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of bovine trypsinogen at 1-8 A resolution. II. Crystallographic refinement, refined crystal structure and comparison with bovine trypsin. J.Mol.Biol., 111, 1977

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