Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YA7
DownloadVisualize
BU of 6ya7 by Molmil
Cdc7-Dbf4 bound to an Mcm2-S40 derived bivalent substrate
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division cycle 7-related protein kinase,Cell division cycle 7-related protein kinase,Cell division cycle 7-related protein kinase, DNA replication licensing factor MCM2, ...
著者Dick, S.D, Cherepanov, P.
登録日2020-03-11
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural Basis for the Activation and Target Site Specificity of CDC7 Kinase.
Structure, 28, 2020
5VW1
DownloadVisualize
BU of 5vw1 by Molmil
Crystal structure of SpyCas9-sgRNA-AcrIIA4 ternary complex
分子名称: 1,2-ETHANEDIOL, CRISPR-associated endonuclease Cas9/Csn1, DI(HYDROXYETHYL)ETHER, ...
著者Yang, H, Patel, D.J.
登録日2017-05-21
公開日2017-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Inhibition Mechanism of an Anti-CRISPR Suppressor AcrIIA4 Targeting SpyCas9.
Mol. Cell, 67, 2017
6YPC
DownloadVisualize
BU of 6ypc by Molmil
Crystal structure of the kinetochore subunits H/I/K/T/W penta-complex from S. cerevisiae at 2.9 angstroms
分子名称: Inner kinetochore subunit CNN1, Inner kinetochore subunit CTF3, Inner kinetochore subunit MCM16, ...
著者Bellini, D, Zhang, Z, Barford, D.
登録日2020-04-15
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the Cenp-HIKHead-TW sub-module of the inner kinetochore CCAN complex.
Nucleic Acids Res., 48, 2020
8ADD
DownloadVisualize
BU of 8add by Molmil
Viral tegument-like DUBs
分子名称: ATP-dependent DNA helicase
著者Erven, I, Abraham, E.T, Hermanns, T, Hofmann, K, Baumann, U.
登録日2022-07-08
公開日2023-02-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A widely distributed family of eukaryotic and bacterial deubiquitinases related to herpesviral large tegument proteins.
Nat Commun, 13, 2022
8QU5
DownloadVisualize
BU of 8qu5 by Molmil
mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 2
分子名称: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
著者Valentin Gese, G, Cipullo, M, Rorbach, J, Hallberg, B.M.
登録日2023-10-13
公開日2024-06-26
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.42 Å)
主引用文献GTPBP8 plays a role in mitoribosome formation in human mitochondria.
Nat Commun, 15, 2024
6XLW
DownloadVisualize
BU of 6xlw by Molmil
Crystal structure of U2AF65 bound to AdML splice site sequence
分子名称: DI(HYDROXYETHYL)ETHER, DNA/RNA (5'-R(P*UP*UP*(UD)P*UP*U)-D(P*(BRU))-R(P*CP*C)-3'), GLYCEROL, ...
著者Maji, D, Jenkins, J.L, Kielkopf, C.L.
登録日2020-06-29
公開日2020-10-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Representative cancer-associated U2AF2 mutations alter RNA interactions and splicing.
J.Biol.Chem., 295, 2020
5YDD
DownloadVisualize
BU of 5ydd by Molmil
Crystal structure of C-terminal domain of Rv1828 from Mycobacterium tuberculosis
分子名称: (6R,8S,9S)-8-(hydroxymethyl)-6,11,11-tris(oxidanyl)-9-propyl-dodecanoic acid, GLYCEROL, SODIUM ION, ...
著者Singh, S, Karthiekeyan, S.
登録日2017-09-12
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Characteristics of the essential pathogenicity factor Rv1828, a MerR family transcription regulator from Mycobacterium tuberculosis.
FEBS J., 285, 2018
2AEO
DownloadVisualize
BU of 2aeo by Molmil
Crystal structure of cisplatinated bovine Cu,Zn superoxide dismutase
分子名称: COPPER (II) ION, Cisplatin, Superoxide dismutase [Cu-Zn], ...
著者Calderone, V, Casini, A, Mangani, S, Messori, L, Orioli, P.L.
登録日2005-07-23
公開日2006-05-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural investigation of cisplatin-protein interactions: selective platination of His19 in a cuprozinc superoxide dismutase.
Angew. Chem. Int. Ed. Engl., 45, 2006
6QYQ
DownloadVisualize
BU of 6qyq by Molmil
Crystal structure of human thymidylate synthase (hTS) variant R175C
分子名称: CHLORIDE ION, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ...
著者Pozzi, C, Mangani, M.
登録日2019-03-09
公開日2019-04-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and Functional Characterization of the Human Thymidylate Synthase (hTS) Interface Variant R175C, New Perspectives for the Development of hTS Inhibitors.
Molecules, 24, 2019
8I13
DownloadVisualize
BU of 8i13 by Molmil
Cryo-EM structure of 6-subunit Smc5/6
分子名称: MMS21 isoform 1, NSE3 isoform 1, Non-structural maintenance of chromosomes element 1 homolog, ...
著者Qian, L, Jun, Z, Xiang, Z, Cheng, T, Zhaoning, W, Duo, J, Zhenguo, C, Wang, L.
登録日2023-01-12
公開日2024-06-26
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Cryo-EM structures of Smc5/6 in multiple states reveal its assembly and functional mechanisms.
Nat.Struct.Mol.Biol., 31, 2024
5WQD
DownloadVisualize
BU of 5wqd by Molmil
Crystal structure of TRF2 TRFH in complex with an NBS1 peptide
分子名称: Nibrin, Telomeric repeat-binding factor 2
著者Hu, C, Chen, Y, Lei, M.
登録日2016-11-26
公開日2017-03-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献NBS1 Phosphorylation Status Dictates Repair Choice of Dysfunctional Telomeres
Mol. Cell, 65, 2017
5YDC
DownloadVisualize
BU of 5ydc by Molmil
Crystal structure of mercury soaked C-terminal domain of Rv1828 from Mycobacterium tuberculosis
分子名称: MERCURY (II) ION, SULFATE ION, Uncharacterized HTH-type transcriptional regulator Rv1828
著者Singh, S, Karthikeyan, S.
登録日2017-09-12
公開日2018-09-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Characteristics of the essential pathogenicity factor Rv1828, a MerR family transcription regulator from Mycobacterium tuberculosis.
FEBS J., 285, 2018
6YR7
DownloadVisualize
BU of 6yr7 by Molmil
14-3-3 sigma in complex with hDMX-342+367 peptide
分子名称: 14-3-3 protein sigma, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Protein Mdm4
著者Wolter, M, Srdanovic, S, Warriner, S, Wilson, A, Ottmann, C.
登録日2020-04-19
公開日2021-11-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.105 Å)
主引用文献Understanding the interaction of 14-3-3 proteins with hDMX and hDM2: a structural and biophysical study.
Febs J., 2022
6YR5
DownloadVisualize
BU of 6yr5 by Molmil
14-3-3 sigma in complex with hDMX-367 peptide
分子名称: 14-3-3 protein sigma, Protein Mdm4, SULFATE ION
著者Wolter, M, Srdanovic, S, Ottman, C, Warriner, S, Wilson, A.
登録日2020-04-19
公開日2021-11-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Understanding the interaction of 14-3-3 proteins with hDMX and hDM2: a structural and biophysical study.
Febs J., 2022
6YR6
DownloadVisualize
BU of 6yr6 by Molmil
14-3-3 sigma in complex with hDM2-186 peptide
分子名称: 14-3-3 protein sigma, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, IODIDE ION, ...
著者Wolter, M, Srdanovic, S, Warriner, S, Wilson, A, Ottmann, C.
登録日2020-04-19
公開日2021-11-03
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Understanding the interaction of 14-3-3 proteins with hDMX and hDM2: a structural and biophysical study.
Febs J., 2022
1T29
DownloadVisualize
BU of 1t29 by Molmil
Crystal structure of the BRCA1 BRCT repeats bound to a phosphorylated BACH1 peptide
分子名称: BACH1 phosphorylated peptide, Breast cancer type 1 susceptibility protein
著者Shiozaki, E.N, Gu, L, Yan, N, Shi, Y.
登録日2004-04-20
公開日2004-05-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the BRCT repeats of BRCA1 bound to a BACH1 phosphopeptide: implications for signaling.
Mol.Cell, 14, 2004
1U64
DownloadVisualize
BU of 1u64 by Molmil
The Solution Structure of d(G3T4G4)2
分子名称: 5'-D(*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3'
著者Sket, P, Crnugelj, M, Plavec, J.
登録日2004-07-29
公開日2004-10-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献d(G3T4G4) forms unusual dimeric G-quadruplex structure with the same general fold in the presence of K+, Na+ or NH4+ ions.
Bioorg.Med.Chem., 12, 2004
2A4J
DownloadVisualize
BU of 2a4j by Molmil
Solution structure of the C-terminal domain (T94-Y172) of the human centrin 2 in complex with a 17 residues peptide (P1-XPC) from xeroderma pigmentosum group C protein
分子名称: 17-mer peptide P1-XPC from DNA-repair protein complementing XP-C cells, Centrin 2
著者Yang, A, Miron, S, Mouawad, L, Duchambon, P, Blouquit, Y, Craescu, C.T.
登録日2005-06-29
公開日2005-07-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Flexibility and plasticity of human centrin 2 binding to the xeroderma pigmentosum group C protein (XPC) from nuclear excision repair.
Biochemistry, 45, 2006
1ITG
DownloadVisualize
BU of 1itg by Molmil
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HIV-1 INTEGRASE: SIMILARITY TO OTHER POLYNUCLEOTIDYL TRANSFERASES
分子名称: CACODYLATE ION, HIV-1 INTEGRASE
著者Dyda, F, Hickman, A.B, Jenkins, T.M, Engelman, A, Craigie, R, Davies, D.R.
登録日1994-11-21
公開日1995-05-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the catalytic domain of HIV-1 integrase: similarity to other polynucleotidyl transferases.
Science, 266, 1994
2M3A
DownloadVisualize
BU of 2m3a by Molmil
NMR solution structure of a MYB-like DNA binding domain of KNL-2 from C. Elegans
分子名称: Protein KNL-2
著者Osborne, M.J, Borden, L.B.
登録日2013-01-15
公開日2014-04-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Centromere epigenome stability is mediated by structural recognition by the Centromere Licensing Complex
To be Published
1IME
DownloadVisualize
BU of 1ime by Molmil
STRUCTURAL STUDIES OF METAL BINDING BY INOSITOL MONOPHOSPHATASE: EVIDENCE FOR TWO-METAL ION CATALYSIS
分子名称: CALCIUM ION, INOSITOL MONOPHOSPHATASE
著者Bone, R.
登録日1994-02-08
公開日1995-02-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural studies of metal binding by inositol monophosphatase: evidence for two-metal ion catalysis.
Biochemistry, 33, 1994
5HS3
DownloadVisualize
BU of 5hs3 by Molmil
Human thymidylate synthase complexed with dUMP and 3-amino-2-benzoyl-4-methylthieno[2,3-b]pyridin-6-ol
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 3-amino-2-benzoyl-4-methylthieno[2,3-b]pyridin-6-ol, Thymidylate synthase
著者Chen, D, Almqvist, H, Axelsson, H, Jafari, R, Mateus, A, Haraldsson, M, Larsson, A, Artursson, P, Molina, D.M, Lundback, T, Nordlund, P.
登録日2016-01-25
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.103 Å)
主引用文献CETSA screening identifies known and novel thymidylate synthase inhibitors and slow intracellular activation of 5-fluorouracil
Nat Commun, 7, 2016
3VHS
DownloadVisualize
BU of 3vhs by Molmil
Crystal structure of UBZ of human WRNIP1
分子名称: ATPase WRNIP1, SODIUM ION, ZINC ION
著者Suzuki, N, Wakatsuki, S, Kawasaki, M.
登録日2011-09-06
公開日2012-10-10
最終更新日2016-06-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 2016
2DCH
DownloadVisualize
BU of 2dch by Molmil
Crystal structure of archaeal intron-encoded homing endonuclease I-Tsp061I
分子名称: CHLORIDE ION, SULFATE ION, putative homing endonuclease
著者Nakayama, H, Tsuge, H, Shimamura, T, Miyano, M, Nomura, N, Sako, Y.
登録日2006-01-06
公開日2006-07-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structure of a hyperthermophilic archaeal homing endonuclease, I-Tsp061I: contribution of cross-domain polar networks to thermostability.
J.Mol.Biol., 365, 2007
4DDI
DownloadVisualize
BU of 4ddi by Molmil
Crystal structure of human OTUB1/UbcH5b~Ub/Ub
分子名称: Polyubiquitin-C, Ubiquitin-conjugating enzyme E2 D2, Ubiquitin thioesterase OTUB1
著者Juang, Y.C, Sanches, M, Sicheri, F.
登録日2012-01-18
公開日2012-02-22
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (3.802 Å)
主引用文献OTUB1 Co-opts Lys48-Linked Ubiquitin Recognition to Suppress E2 Enzyme Function.
Mol.Cell, 45, 2012

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon