Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5DTT
DownloadVisualize
BU of 5dtt by Molmil
Fragments bound to the OXA-48 beta-lactamase: Compound 3
分子名称: 1,2-ETHANEDIOL, 3-(1,3-thiazol-2-yl)benzoic acid, Beta-lactamase, ...
著者Lund, B.A, Christopeit, T, Leiros, H.-K.S.
登録日2015-09-18
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.10000539 Å)
主引用文献Screening and Design of Inhibitor Scaffolds for the Antibiotic Resistance Oxacillinase-48 (OXA-48) through Surface Plasmon Resonance Screening.
J.Med.Chem., 59, 2016
1BYL
DownloadVisualize
BU of 1byl by Molmil
BLEOMYCIN RESISTANCE PROTEIN FROM STREPTOALLOTEICHUS HINDUSTANUS
分子名称: PROTEIN (BLEOMYCIN RESISTANCE PROTEIN)
著者Dumas, P, Bergdoll, M, Cagnon, C, Masson, J.M.
登録日1998-10-17
公開日1999-10-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure and site-directed mutagenesis of a bleomycin resistance protein and their significance for drug sequestering.
EMBO J., 13, 1994
5UWS
DownloadVisualize
BU of 5uws by Molmil
Crystal Structure of X11L2 NES Peptide in complex with CRM1-Ran-RanBP1
分子名称: Amyloid beta A4 precursor protein-binding family A member 3, Exportin-1,Exportin-1, GLYCEROL, ...
著者Fung, H.Y.J, Chook, Y.M.
登録日2017-02-21
公開日2017-03-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Nuclear export receptor CRM1 recognizes diverse conformations in nuclear export signals.
Elife, 6, 2017
5BW0
DownloadVisualize
BU of 5bw0 by Molmil
The crystal structure of minor pseudopilin binary complex of XcpV and XcpW from the Type 2 secretion system of Pseudomonas aeruginosa
分子名称: SULFATE ION, Type II secretion system protein I, Type II secretion system protein J
著者Zhang, Y, Faucher, F, Poole, K, Jia, Z.
登録日2015-06-05
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-guided disruption of the pseudopilus tip complex inhibits the Type II secretion in Pseudomonas aeruginosa.
PLoS Pathog., 14, 2018
3ZG2
DownloadVisualize
BU of 3zg2 by Molmil
Sterol 14 alpha-demethylase (CYP51) from Trypanosoma cruzi in complex with the pyridine inhibitor (S)-2-(4-chlorophenyl)-2-(pyridin-3-yl)-1- (4-(4-(trifluoromethyl)phenyl)piperazin-1-yl)ethanone (EPL-BS1246,UDO)
分子名称: (S)-2-(4-chlorophenyl)-2-pyridin-3-yl-1-[4-[4-(trifluoromethyl)phenyl]piperazin-1-yl]ethanone, PROTOPORPHYRIN IX CONTAINING FE, STEROL 14-ALPHA DEMETHYLASE
著者Hargrove, T.Y, Wawrzak, Z, Keenan, M, Chatelain, E, Lepesheva, G.I.
登録日2012-12-14
公開日2013-09-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Complexes of Trypanosoma Cruzi Sterol 14Alpha-Demethylase (Cyp51) with Two Pyridine-Based Drug Candidates for Chagas Disease: Structural Basis for Pathogen-Selectivity
J.Biol.Chem., 288, 2013
1BQJ
DownloadVisualize
BU of 1bqj by Molmil
CRYSTAL STRUCTURE OF D(ACCCT)
分子名称: DNA (5'-D(*AP*CP*CP*CP*T)-3')
著者Weil, J, Min, T, Yang, C, Wang, S, Sutherland, C, Sinha, N, Kang, C.H.
登録日1998-08-17
公開日1999-03-18
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Stabilization of the i-motif by intramolecular adenine-adenine-thymine base triple in the structure of d(ACCCT).
Acta Crystallogr.,Sect.D, 55, 1999
7NMH
DownloadVisualize
BU of 7nmh by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-070
分子名称: (5-methanoyl-2-nitro-phenyl) methanesulfonate, 14-3-3 protein sigma, CALCIUM ION, ...
著者Wolter, M, Ottmann, C.
登録日2021-02-23
公開日2021-09-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach.
J.Med.Chem., 64, 2021
6S9Q
DownloadVisualize
BU of 6s9q by Molmil
Fragment AZ-004 binding at a primary and secondary site in a p53pT387/14-3-3 complex
分子名称: 14-3-3 protein sigma, 4-methyl-5-phenyl-thiophene-2-carboximidamide, CALCIUM ION, ...
著者Leysen, S, Guillory, X, Wolter, M, Genet, S, Somsen, B, Patel, J, Castaldi, P, Ottmann, C.
登録日2019-07-15
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
4QYG
DownloadVisualize
BU of 4qyg by Molmil
CHK1 kinase domain in complex with diazacarbazole compound 14
分子名称: 3-[4-(4-methylpiperazin-1-yl)phenyl]-9H-pyrrolo[2,3-b:5,4-c']dipyridine-6-carboxylic acid, Serine/threonine-protein kinase Chk1
著者Wiesmann, C, Wu, P.
登録日2014-07-24
公開日2014-12-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Discovery of the 1,7-diazacarbazole class of inhibitors of checkpoint kinase 1.
Bioorg.Med.Chem.Lett., 24, 2014
2FZJ
DownloadVisualize
BU of 2fzj by Molmil
New Insights into DHFR Interactions: Analysis of Pneumocystis carinii and Mouse DHFR Complexes with NADPH and Two Highly Potent Trimethoprim Derivatives
分子名称: 2,4-DIAMINO-5-[3',4'-DIMETHOXY-5'-(5-CARBOXYL-1-PENTYNYL)]BENZYL PYRIMIDINE, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Cody, V, Pace, J, Chisum, K, Rosowsky, A.
登録日2006-02-09
公開日2006-12-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献New insights into DHFR interactions: analysis of Pneumocystis carinii and mouse DHFR complexes with NADPH and two highly potent 5-(omega-carboxy(alkyloxy) trimethoprim derivatives reveals conformational correlations with activity and novel parallel ring stacking interactions.
Proteins, 65, 2006
4R3M
DownloadVisualize
BU of 4r3m by Molmil
Crystal structure of Human Hsp90 with JR9
分子名称: Heat shock protein HSP 90-alpha, N~3~-benzyl-2-[(6-bromo-1,3-benzodioxol-5-yl)methyl]imidazo[1,2-a]pyrazine-3,8-diamine
著者Li, J, Yang, M, Ren, J, Xiong, B, He, J.
登録日2014-08-16
公開日2014-11-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Multi-substituted 8-aminoimidazo[1,2-a]pyrazines by Groebke-Blackburn-Bienayme reaction and their Hsp90 inhibitory activity.
Org.Biomol.Chem., 13, 2015
3I4Z
DownloadVisualize
BU of 3i4z by Molmil
Crystal structure of the dimethylallyl tryptophan synthase FgaPT2 from Aspergillus fumigatus
分子名称: 1,3-BUTANEDIOL, GLYCEROL, Tryptophan dimethylallyltransferase
著者Schall, C, Zocher, G, Stehle, T.
登録日2009-07-03
公開日2009-09-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献The structure of dimethylallyl tryptophan synthase reveals a common architecture of aromatic prenyltransferases in fungi and bacteria
Proc.Natl.Acad.Sci.USA, 106, 2009
4OQ9
DownloadVisualize
BU of 4oq9 by Molmil
Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints
分子名称: Coat protein, MAGNESIUM ION, PHOSPHATE ION, ...
著者Larson, S.B, Day, J.S, McPherson, A.
登録日2014-02-07
公開日2014-09-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Satellite tobacco mosaic virus refined to 1.4 angstrom resolution.
Acta Crystallogr.,Sect.D, 70, 2014
4QRM
DownloadVisualize
BU of 4qrm by Molmil
crystal structure of a binary complex of FliM-FliG middle domains from T.maritima
分子名称: Flagellar motor switch protein FliG, Flagellar motor switch protein FliM
著者Crane, B.R, Sircar, R.
登録日2014-07-01
公開日2015-06-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.315 Å)
主引用文献Assembly states of FliM and FliG within the flagellar switch complex.
J.Mol.Biol., 427, 2015
1DDY
DownloadVisualize
BU of 1ddy by Molmil
MOLECULAR RECOGNITION BY THE VITAMIN B12 RNA APTAMER
分子名称: COBALAMIN, METHYLAMINE, VITAMIN B12 BINDING RNA
著者Sussman, D, Nix, J.C, Wilson, C.
登録日1999-11-12
公開日2000-01-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structural basis for molecular recognition by the vitamin B 12 RNA aptamer.
Nat.Struct.Biol., 7, 2000
4QYF
DownloadVisualize
BU of 4qyf by Molmil
CHK1 kinase domain in complex with aminopyrazine compound 13
分子名称: 4-[3-amino-6-(3-hydroxyphenyl)pyrazin-2-yl]benzoic acid, Serine/threonine-protein kinase Chk1
著者Appleton, B, Wu, P.
登録日2014-07-24
公開日2014-12-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery of the 1,7-diazacarbazole class of inhibitors of checkpoint kinase 1.
Bioorg.Med.Chem.Lett., 24, 2014
3I4X
DownloadVisualize
BU of 3i4x by Molmil
Crystal structure of the dimethylallyl tryptophan synthase FgaPT2 from Aspergillus fumigatus in complex with Trp and DMSPP
分子名称: DIMETHYLALLYL S-THIOLODIPHOSPHATE, GLYCEROL, TRYPTOPHAN, ...
著者Schall, C, Zocher, G, Stehle, T.
登録日2009-07-03
公開日2009-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of dimethylallyl tryptophan synthase reveals a common architecture of aromatic prenyltransferases in fungi and bacteria
Proc.Natl.Acad.Sci.USA, 106, 2009
5E2Q
DownloadVisualize
BU of 5e2q by Molmil
Structure of human DPP3 in complex with angiotensin-II
分子名称: Dipeptidyl peptidase 3, MAGNESIUM ION, POTASSIUM ION, ...
著者Kumar, P, Reisinger, M, Reithofer, V, Gruber, K.
登録日2015-10-01
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.404 Å)
主引用文献Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
5EDF
DownloadVisualize
BU of 5edf by Molmil
Crystal structure of the selenomethionine-substituted iron-regulated protein FrpD from Neisseria meningitidis
分子名称: AZIDE ION, FrpC operon protein, HEXAETHYLENE GLYCOL, ...
著者Sviridova, E, Bumba, L, Rezacova, P, Sebo, P, Kuta Smatanova, I.
登録日2015-10-21
公開日2017-02-01
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis of the interaction between the putative adhesion-involved and iron-regulated FrpD and FrpC proteins of Neisseria meningitidis.
Sci Rep, 7, 2017
1UKX
DownloadVisualize
BU of 1ukx by Molmil
Solution structure of the RWD domain of mouse GCN2
分子名称: GCN2 eIF2alpha kinase
著者Nameki, N, Yoneyama, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-09-03
公開日2004-08-03
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the RWD domain of the mouse GCN2 protein.
Protein Sci., 13, 2004
5DTS
DownloadVisualize
BU of 5dts by Molmil
Fragments bound to the OXA-48 beta-lactamase: Compound 2
分子名称: 3-(pyridin-3-yl)benzoic acid, Beta-lactamase, CHLORIDE ION
著者Lund, B.A, Christopeit, T, Leiros, H.-K.S.
登録日2015-09-18
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.94015872 Å)
主引用文献Screening and Design of Inhibitor Scaffolds for the Antibiotic Resistance Oxacillinase-48 (OXA-48) through Surface Plasmon Resonance Screening.
J.Med.Chem., 59, 2016
4R9W
DownloadVisualize
BU of 4r9w by Molmil
Crystal structure of platelet factor 4 complexed with fondaparinux
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside, Platelet factor 4
著者Cai, Z, Zhu, Z, Liu, Q, Greene, M.I.
登録日2014-09-08
公開日2015-12-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Atomic description of the immune complex involved in heparin-induced thrombocytopenia.
Nat Commun, 6, 2015
2F4O
DownloadVisualize
BU of 2f4o by Molmil
The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
分子名称: CHLORIDE ION, PHQ-VAL-ALA-ASP-CF0, XP-C repair complementing complex 58 kDa protein, ...
著者Zhao, G, Zhou, X, Wang, L, Kisker, C, Lennarz, W.J, Schindelin, H.
登録日2005-11-23
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure of the mouse peptide N-glycanase-HR23 complex suggests co-evolution of the endoplasmic reticulum-associated degradation and DNA repair pathways.
J.Biol.Chem., 281, 2006
7NIT
DownloadVisualize
BU of 7nit by Molmil
X-ray structure of a multidomain BbgIII from Bifidobacterium bifidum
分子名称: Beta-galactosidase, CALCIUM ION, GLYCEROL, ...
著者Moroz, O.V, Blagova, E, Lebedev, A.A, Sanchez Rodriguez, F, Rigden, D.J, Tams, J.W, Wilting, R, Vester, J.K, Longhin, E, Krogh, K.B.R, Pache, R.A, Davies, G.J, Wilson, K.S.
登録日2021-02-14
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Multitasking in the gut: the X-ray structure of the multidomain BbgIII from Bifidobacterium bifidum offers possible explanations for its alternative functions.
Acta Crystallogr D Struct Biol, 77, 2021
5VTD
DownloadVisualize
BU of 5vtd by Molmil
Crystal Structure of the Co-bound Human Heavy-Chain Ferritin variant 122H-delta C-star
分子名称: CALCIUM ION, CHLORIDE ION, COBALT (II) ION, ...
著者Bailey, J.B, Zhang, L, Chiong, J.A, Tezcan, F.A.
登録日2017-05-16
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Synthetic Modularity of Protein-Metal-Organic Frameworks.
J. Am. Chem. Soc., 139, 2017

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon