PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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4L1T	Transthyretin in complex with (E)-3-(dimethylamino)-5-(4-hydroxy-3,5-dimethylstyryl)benzoic acid 分子名称: 3-(dimethylamino)-5-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]benzoic acid, Transthyretin 著者 Connelly, S, Wilson, I.A. 登録日 2013-06-03 公開日 2013-10-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 Fluorogenic small molecules requiring reaction with a specific protein to create a fluorescent conjugate for biological imaging-what we know and what we need to learn. Biopolymers, 101, 2014
4L7F	Co-crystal Structure of JNK1 and AX13587 分子名称: Mitogen-activated protein kinase 8, N-[1-(4-fluorophenyl)cyclopropyl]-4-[(trans-4-hydroxycyclohexyl)amino]imidazo[1,2-a]quinoxaline-8-carboxamide 著者 Walter, R.L, Ranieri, G.M, Riggs, A.M, Weissig, H, Li, B, Shreder, K.R. 登録日 2013-06-13 公開日 2013-08-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Hit-to-lead optimization and kinase selectivity of imidazo[1,2-a]quinoxalin-4-amine derived JNK1 inhibitors. Bioorg.Med.Chem.Lett., 23, 2013
7B1X	Crystal structure of cold-active esterase PMGL3 from permafrost metagenomic library 分子名称: esterase PMGL3 著者 Boyko, K.M, Nikolaeva, A.Y, Petrovskaya, L.E, Kryukova, M.V, Kryukova, E.A, Korzhenevsky, D.A, Lomakina, G.Y, Novototskaya-Vlasova, K.A, Rivkina, E.M, Dolgikh, D.A, Kirpichnikov, M.P, Popov, V.O. 登録日 2020-11-25 公開日 2021-11-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and Biochemical Characterization of a Cold-Active PMGL3 Esterase with Unusual Oligomeric Structure. Biomolecules, 11, 2021
7ARZ	Ternary complex of NAD-dependent formate dehydrogenase from Physcomitrium patens 分子名称: AZIDE ION, Formate dehydrogenase, mitochondrial, ... 著者 Goryaynova, D.A, Nikolaeva, A.Y, Pometun, A.A, Savin, S.S, Parshin, P.D, Popov, V.O, Tishkov, V.I, Boyko, K.M. 登録日 2020-10-26 公開日 2021-11-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Ternary complex of NAD-dependent formate dehydrogenase from Physcomitrium patens To Be Published
7APT	The Fk1 domain of FKBP51 in complex with ((1S,5S,6R)-10-((3,5-dichlorophenyl)sulfonyl)-2-oxo-5-vinyl-3,10-diazabicyclo[4.3.1]decan-3-yl)acetic acid 分子名称: 2-[(1~{S},5~{S},6~{R})-10-[3,5-bis(chloranyl)phenyl]sulfonyl-5-ethenyl-2-oxidanylidene-3,10-diazabicyclo[4.3.1]decan-3-yl]ethanoic acid, Peptidyl-prolyl cis-trans isomerase FKBP5 著者 Kolos, M.J, Pomplun, S, Riess, B, Purder, P, Voll, M.A, Merz, S, Bracher, A, Meyners, C, Krewald, V, Hausch, F. 登録日 2020-10-19 公開日 2021-11-10 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.131 Å) 主引用文献 Picomolar FKBP inhibitors enabled by a single water-displacing methyl group in bicyclic [4.3.1] aza-amides. Chem Sci, 12, 2021
4KY7	Crystal structure of Staphylococcal nuclease variant Delta+PHS V74D at cryogenic temperature 分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease 著者 Robinson, A.C, Schlessman, J.L, Garcia-Moreno E, B. 登録日 2013-05-28 公開日 2013-06-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal structure of Staphylococcal nuclease variant Delta+PHS V74D at cryogenic temperature To be Published
4LDN	Crystal structure of a putative purine nucleoside phosphorylase from Vibrio fischeri ES114 (Target NYSGRC-029521) 分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type 著者 Sampathkumar, P, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2013-06-24 公開日 2013-07-03 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Crystal structure of a putative purine nucleoside phosphorylase from Vibrio fischeri ES114 (Target NYSGRC-029521) to be published
4KZZ	Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A 分子名称: 18S Ribosomal RNA, 40S Ribosomal Protein RACK1, 40S Ribosomal Protein S10, ... 著者 Lomakin, I.B, Steitz, T.A. 登録日 2013-05-30 公開日 2013-07-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (7.0305 Å) 主引用文献 The initiation of mammalian protein synthesis and mRNA scanning mechanism. Nature, 500, 2013
7AZ8	DNA polymerase sliding clamp from Escherichia coli with peptide 43 bound 分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZD	DNA polymerase sliding clamp from Escherichia coli with peptide 20 bound 分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZE	DNA polymerase sliding clamp from Escherichia coli with peptide 18 bound 分子名称: Beta sliding clamp, GLYCEROL, MALONATE ION, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZC	DNA polymerase sliding clamp from Escherichia coli with peptide 22 bound 分子名称: Beta sliding clamp, GLYCEROL, Peptide 22 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
4LGY	Importance of Hydrophobic Cavities in Allosteric Regulation of Formylglycinamide Synthetase: Insight from Xenon Trapping and Statistical Coupling Analysis 分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ... 著者 Tanwar, A.S, Goyal, V.D, Choudhary, D, Panjikar, S, Anand, R. 登録日 2013-06-30 公開日 2013-12-11 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Importance of hydrophobic cavities in allosteric regulation of formylglycinamide synthetase: insight from xenon trapping and statistical coupling analysis Plos One, 8, 2013
4KVH	Crystal structure of ketosteroid isomerase fold protein Hmuk_0747 分子名称: BROMIDE ION, CACODYLATE ION, FORMIC ACID, ... 著者 Chang, C, Holowicki, J, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2013-05-22 公開日 2013-06-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Crystal structure of ketosteroid isomerase fold protein Hmuk_0747 To be Published
4L9T	Crystal structure of MepR F27L mutant from multidrug resistant S. aureus clinical isolate 分子名称: MepR, SULFATE ION 著者 Birukou, I, Brennan, R.G. 登録日 2013-06-18 公開日 2013-09-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.794 Å) 主引用文献 The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus. MBio, 4, 2013
4LEC	Human Methyltransferase-Like Protein 21A 分子名称: Protein-lysine methyltransferase METTL21A, S-ADENOSYL-L-HOMOCYSTEINE, UNKNOWN ATOM OR ION 著者 Dong, A, Zeng, H, Fenner, M, Wernimont, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC) 登録日 2013-06-25 公開日 2013-07-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 The Crystal Structure of Human Methyltransferase-Like Protein 21A in Complex with SAH To be Published
4LEL	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-06-25 公開日 2014-08-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.90000033 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
4LCK	Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA 分子名称: MAGNESIUM ION, Ribosomal protein YbxF, STRONTIUM ION, ... 著者 Zhang, J, Ferre-D'Amare, A.R. 登録日 2013-06-21 公開日 2013-07-31 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA. Nature, 500, 2013
4LLN	Crystal structure of S. aureus MepR-DNA complex 分子名称: MepR, Palindromized mepR operator sequence 著者 Birukou, I, Brennan, R.G. 登録日 2013-07-09 公開日 2014-05-14 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.842 Å) 主引用文献 Structural mechanism of transcription regulation of the Staphylococcus aureus multidrug efflux operon mepRA by the MarR family repressor MepR. Nucleic Acids Res., 42, 2014
4LMF	C1s CUB1-EGF-CUB2 分子名称: CALCIUM ION, Complement C1s subcomponent heavy chain, SODIUM ION 著者 Wallis, R, Venkatraman Girija, U, Moody, P.C.E, Marshall, J.E. 登録日 2013-07-10 公開日 2013-08-07 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (2.921 Å) 主引用文献 Structural basis of the C1q/C1s interaction and its central role in assembly of the C1 complex of complement activation. Proc.Natl.Acad.Sci.USA, 110, 2013
7B3U	OXA-10 beta-lactamase with covalent modification 分子名称: Beta-lactamase OXA-10, DI(HYDROXYETHYL)ETHER, SODIUM ION, ... 著者 Lang, P.A, Brem, J, Schofield, C.J. 登録日 2020-12-01 公開日 2022-01-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.598 Å) 主引用文献 Studies on enmetazobactam clarify mechanisms of widely used beta-lactamase inhibitors. Proc.Natl.Acad.Sci.USA, 119, 2022
7B3S	OXA-10 beta-lactamase with S67Dha modification 分子名称: Beta-lactamase OXA-10, CARBON DIOXIDE, SODIUM ION, ... 著者 Lang, P.A, Brem, J, Schofield, C.J. 登録日 2020-12-01 公開日 2022-01-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Studies on enmetazobactam clarify mechanisms of widely used beta-lactamase inhibitors. Proc.Natl.Acad.Sci.USA, 119, 2022
4LCN	Crytsal structure of NE0047 in complex with 2'-DEOXY-GUANOSINE 分子名称: 1,2-ETHANEDIOL, 2'-DEOXY-GUANOSINE, Cytidine and deoxycytidylate deaminase zinc-binding region, ... 著者 Anand, R, Bitra, A, Biswas, A. 登録日 2013-06-22 公開日 2014-01-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase Biochemistry, 52, 2013
4LD4	Crystal structure of NE0047 in complex with cytosine 分子名称: 6-AMINOPYRIMIDIN-2(1H)-ONE, Cytidine and deoxycytidylate deaminase zinc-binding region, ZINC ION 著者 Bitra, A, Biswas, A, Anand, R. 登録日 2013-06-24 公開日 2014-01-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase Biochemistry, 52, 2013
4LLI	Crystal Structure of human Myosin 5a globular domain 分子名称: Unconventional myosin-Va 著者 Velvarska, H, Niessing, D. 登録日 2013-07-09 公開日 2013-12-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural insights into the globular tails of the human type v myosins myo5a, myo5b, and myo5c. Plos One, 8, 2013

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