PDB: 2869 件ウェブページステータス検索Chemie searchBIRD

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4BQF	Arabidopsis thaliana cytosolic alpha-1,4-glucan phosphorylase (PHS2) in complex with acarbose 分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC, ... 著者 O'Neill, E.C, Rashid, A.M, Stevenson, C.E.M, Hetru, A.C, Gunning, A.P, Rejzek, M, Nepogodiev, S.A, Bornemann, S, Lawson, D.M, Field, R.A. 登録日 2013-05-30 公開日 2014-02-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Sugar-Coated Sensor Chip and Nanoparticle Surfaces for the in Vitro Enzymatic Synthesis of Starch-Like Materials Chem.Sci., 5, 2014
4NX0	Crystal structure of Abp-WT, a GH27-b-L-arabinopyranosidase from Geobacillus stearothermophilus 分子名称: Abp, a GH27 beta-L-arabinopyranosidase, CITRIC ACID, ... 著者 Lansky, S, Solomon, H.V, Salama, R, Belrhali, H, Shoham, Y, Shoham, G. 登録日 2013-12-08 公開日 2014-12-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Structure-specificity relationships in Abp, a GH27 beta-L-arabinopyranosidase from Geobacillus stearothermophilus T6 Acta Crystallogr.,Sect.D, 70, 2014
6GXV	Amylase in complex with acarbose 分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, A-amylase, CALCIUM ION, ... 著者 Agirre, J, Moroz, O, Meier, S, Brask, J, Munch, A, Hoff, T, Andersen, C, Wilson, K.S, Davies, G.J. 登録日 2018-06-27 公開日 2019-01-23 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 The structure of the AliC GH13 alpha-amylase from Alicyclobacillus sp. reveals the accommodation of starch branching points in the alpha-amylase family. Acta Crystallogr D Struct Biol, 75, 2019
7AZ5	DNA polymerase sliding clamp from Escherichia coli with peptide 47 bound 分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, Peptide 47, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZG	DNA polymerase sliding clamp from Escherichia coli with peptide 4 bound 分子名称: Beta sliding clamp, Peptide 4 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.92 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZL	DNA polymerase sliding clamp from Escherichia coli with peptide 38 bound 分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZ7	DNA polymerase sliding clamp from Escherichia coli with peptide 37 bound 分子名称: Beta sliding clamp, FORMIC ACID, PENTAETHYLENE GLYCOL, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZ6	DNA polymerase sliding clamp from Escherichia coli with peptide 36 bound 分子名称: ACETATE ION, Beta sliding clamp, CHLORIDE ION, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZ8	DNA polymerase sliding clamp from Escherichia coli with peptide 43 bound 分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZD	DNA polymerase sliding clamp from Escherichia coli with peptide 20 bound 分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZE	DNA polymerase sliding clamp from Escherichia coli with peptide 18 bound 分子名称: Beta sliding clamp, GLYCEROL, MALONATE ION, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZC	DNA polymerase sliding clamp from Escherichia coli with peptide 22 bound 分子名称: Beta sliding clamp, GLYCEROL, Peptide 22 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZF	DNA polymerase sliding clamp from Escherichia coli with peptide 8 bound 分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
7AZK	DNA polymerase sliding clamp from Escherichia coli with peptide 35 bound 分子名称: Beta sliding clamp, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
4B9Z	Crystal Structure of Agd31B, alpha-transglucosylase, complexed with Acarbose 分子名称: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ALPHA-GLUCOSIDASE, ... 著者 Larsbrink, J, Izumi, A, Hemsworth, G.R, Davies, G.J, Brumer, H. 登録日 2012-09-09 公開日 2012-11-14 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Enzymology of Cellvibrio Japonicus Agd31B Reveals Alpha-Transglucosylase Activity in Glycoside Hydrolase Family 31 J.Biol.Chem., 287, 2012
6CAO	Structure of the ribosomal decoding complex at ambient temperature 分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 DeMirci, H. 登録日 2018-01-31 公開日 2018-07-25 最終更新日 2019-04-17 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Structure of the 30S ribosomal decoding complex at ambient temperature. RNA, 24, 2018
6BY7	Folding DNA into a lipid-conjugated nano-barrel for controlled reconstitution of membrane proteins 分子名称: DNA (26-MER), DNA (27-MER), DNA (29-MER), ... 著者 Dong, Y, Chen, S, Zhang, S, Sodroski, J, Yang, Z, Liu, D, Mao, Y. 登録日 2017-12-20 公開日 2018-02-28 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Folding DNA into a Lipid-Conjugated Nanobarrel for Controlled Reconstitution of Membrane Proteins. Angew. Chem. Int. Ed. Engl., 57, 2018
7F86	Crystal structure of Phycoerythrin from Halomicronema Sp. R31DM 分子名称: PHYCOERYTHROBILIN, Phycoerythrin alpha subunit, Phycoerythrin beta subunit 著者 Patel, S.N, Gupta, G.D, Sonani, R.R, Singh, N.K, Kumar, V, Madamwar, D. 登録日 2021-07-01 公開日 2022-04-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Crystal structure analysis of phycoerythrin from marine cyanobacterium Halomicronema . J.Biomol.Struct.Dyn., 41, 2023
7F4V	Cryo-EM structure of a primordial cyanobacterial photosystem I 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Kato, K, Hamaguchi, T, Nagao, R, Kawakami, K, Yonekura, K, Shen, J.R. 登録日 2021-06-21 公開日 2022-04-06 実験手法 ELECTRON MICROSCOPY (2.04 Å) 主引用文献 Structural basis for the absence of low-energy chlorophylls responsible for photoprotection from a primitive cyanobacterial PSI Biorxiv, 2022
7EXK	An AA9 LPMO of Ceriporiopsis subvermispora 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Nguyen, H, Kondo, K, Nagata, T, Katahira, M, Mikami, B. 登録日 2021-05-27 公開日 2022-05-04 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Functional and Structural Characterizations of Lytic Polysaccharide Monooxygenase, Which Cooperates Synergistically with Cellulases, from Ceriporiopsis subvermispora. Acs Sustain Chem Eng, 10, 2022
5MDW	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 James, N.R, Brown, A, Gordiyenko, Y, Ramakrishnan, V. 登録日 2016-11-13 公開日 2016-12-14 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.06 Å) 主引用文献 Translational termination without a stop codon. Science, 354, 2016
5MEI	Crystal structure of Agelastatin A bound to the 80S ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 McClary, B, Zinshteyn, B, Meyer, M, Jouanneau, M, Pellegrino, S, Yusupova, G, Schuller, A, Reyes, J.C.P, Lu, J, Luo, C, Dang, Y, Romo, D, Yusupov, M, Green, R, Liu, J.O. 登録日 2016-11-15 公開日 2017-06-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Inhibition of Eukaryotic Translation by the Antitumor Natural Product Agelastatin A. Cell Chem Biol, 24, 2017
5MX2	Photosystem II depleted of the Mn4CaO5 cluster at 2.55 A resolution 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Zhang, M, Bommer, M, Chatterjee, R, Hussain, R, Kern, J, Yano, J, Dau, H, Dobbek, H, Zouni, A. 登録日 2017-01-20 公開日 2017-08-02 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.197 Å) 主引用文献 Structural insights into the light-driven auto-assembly process of the water-oxidizing Mn4CaO5-cluster in photosystem II. Elife, 6, 2017
6BY1	E. coli pH03H9 complex 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Amiri, H, Noller, H.F. 登録日 2017-12-19 公開日 2019-02-27 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.94 Å) 主引用文献 Structural evidence for product stabilization by the ribosomal mRNA helicase. Rna, 25, 2019
5MMM	Structure of the 70S chloroplast ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein 2, ... 著者 Bieri, P, Leibundgut, M, Saurer, M, Boehringer, D, Ban, N. 登録日 2016-12-11 公開日 2017-01-11 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 The complete structure of the chloroplast 70S ribosome in complex with translation factor pY. EMBO J., 36, 2017

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