PDB: 13252 件ウェブページステータス検索Chemie searchBIRD

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7NVZ	RNA polymerase II pre-initiation complex with closed promoter DNA in distal position 分子名称: CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... 著者 Aibara, S, Schilbach, S, Cramer, P. 登録日 2021-03-16 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (7.2 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
7NVY	RNA polymerase II pre-initiation complex with closed promoter DNA in proximal position 分子名称: CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... 著者 Aibara, S, Schilbach, S, Cramer, P. 登録日 2021-03-16 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (7.3 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
7KEF	RNA polymerase II elongation complex with unnatural base dTPT3, rNaM in swing state 分子名称: (1S)-1,4-anhydro-1-(3-methoxynaphthalen-2-yl)-5-O-phosphono-D-ribitol, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Oh, J, Wang, D. 登録日 2020-10-10 公開日 2021-06-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.89 Å) 主引用文献 Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II. Nat.Chem.Biol., 17, 2021
7KED	RNA polymerase II elongation complex with unnatural base dTPT3 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Oh, J, Wang, W, Wang, D. 登録日 2020-10-10 公開日 2021-06-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II. Nat.Chem.Biol., 17, 2021
7KEE	RNA polymerase II elongation complex with unnatural base dTPT3, rNaMTP bound to E-site 分子名称: (1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Oh, J, Wang, D. 登録日 2020-10-10 公開日 2021-06-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II. Nat.Chem.Biol., 17, 2021
6EU3	Apo RNA Polymerase III - closed conformation (cPOL3) 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Abascal-Palacios, G, Ramsay, E.P, Beuron, F, Morris, E, Vannini, A. 登録日 2017-10-27 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis of RNA polymerase III transcription initiation. Nature, 553, 2018
6EU2	Apo RNA Polymerase III - open conformation (oPOL3) 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Abascal-Palacios, G, Ramsay, E.P, Beuron, F, Morris, E, Vannini, A. 登録日 2017-10-27 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of RNA polymerase III transcription initiation. Nature, 553, 2018
1TWF	RNA polymerase II complexed with UTP at 2.3 A resolution 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2004-06-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
3FKI	12-Subunit RNA Polymerase II Refined with Zn-SAD data 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Meyer, P.A, Ye, P, Suh, M.H, Zhang, M, Fu, J. 登録日 2008-12-16 公開日 2009-03-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.88 Å) 主引用文献 Structure of the 12-Subunit RNA Polymerase II Refined with the Aid of Anomalous Diffraction Data J.Biol.Chem., 284, 2009
1TWC	RNA polymerase II complexed with GTP 分子名称: DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEPTIDE, DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2004-06-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
7D58	cryo-EM structure of human RNA polymerase III in elongating state 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Wang, Q, Wan, F, Lan, P, Wu, J, Lei, M. 登録日 2020-09-25 公開日 2021-02-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural insights into transcriptional regulation of human RNA polymerase III. Nat.Struct.Mol.Biol., 28, 2021
7D59	cryo-EM structure of human RNA polymerase III in apo state 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Wang, Q, Wan, F, Lan, P, Wu, J, Lei, M. 登録日 2020-09-25 公開日 2021-02-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural insights into transcriptional regulation of human RNA polymerase III. Nat.Struct.Mol.Biol., 28, 2021
1Y1Y	RNA Polymerase II-TFIIS-DNA/RNA complex 分子名称: 5'-D(P*TP*AP*CP*GP*CP*CP*T)-3', 5'-R(P*AP*GP*GP*C)-3', DNA-directed RNA polymerase II 13.6 kDa polypeptide, ... 著者 Cramer, P, Kettenberger, H, Armache, K.-J. 登録日 2004-11-19 公開日 2004-12-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS. Mol.Cell, 16, 2004
1TWG	RNA polymerase II complexed with CTP 分子名称: CYTIDINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2004-06-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
1TWH	RNA polymerase II complexed with 2'dATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2004-06-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
1TWA	RNA polymerase II complexed with ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2004-06-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
4WFZ	Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase - NaCl Crystal Form 分子名称: RNA-directed RNA polymerase, SODIUM ION 著者 Peersen, O.B, McDonald, S.M. 登録日 2014-09-17 公開日 2014-10-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.803 Å) 主引用文献 Structure-Function Relationships Underlying the Replication Fidelity of Viral RNA-Dependent RNA Polymerases. J.Virol., 89, 2015
5W66	RNA polymerase I Initial Transcribing Complex State 3 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-07-26 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
5W5Y	RNA polymerase I Initial Transcribing Complex 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-07-26 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
5W65	RNA polymerase I Initial Transcribing Complex State 2 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-08-02 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
5W64	RNA Polymerase I Initial Transcribing Complex State 1 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-07-26 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
6EXV	Structure of mammalian RNA polymerase II elongation complex inhibited by Alpha-amanitin 分子名称: AMATOXIN, DNA (25-MER), DNA (36-MER), ... 著者 Liu, X, Farnung, L, Wigge, C, Cramer, P. 登録日 2017-11-09 公開日 2018-03-21 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryo-EM structure of a mammalian RNA polymerase II elongation complex inhibited by alpha-amanitin. J. Biol. Chem., 293, 2018
1PQV	RNA polymerase II-TFIIS complex 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Kettenberger, H, Armache, K.-J, Cramer, P. 登録日 2003-06-19 公開日 2003-08-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Architecture of the RNA Polymerase II-TFIIS Complex and Implications for mRNA Cleavage Cell(Cambridge,Mass.), 114, 2003
3QT1	RNA polymerase II variant containing A Chimeric RPB9-C11 subunit 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Ruan, W, Lehmann, E, Thomm, M, Kostrewa, D, Cramer, P. 登録日 2011-02-22 公開日 2011-03-23 最終更新日 2017-08-23 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 Evolution of two modes of intrinsic RNA polymerase transcript cleavage. J.Biol.Chem., 286, 2011
5EZK	RNA polymerase model placed by Molecular replacement into X-ray diffraction map of DNA-bound RNA Polymerase-Sigma 54 holoenzyme complex. 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Darbari, V.C, Yang, Y, Lu, D, Zhang, N, Glyde, R, Wang, Y, Murakami, K.S, Buck, M, Zhang, X. 登録日 2015-11-26 公開日 2015-12-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (8.5 Å) 主引用文献 TRANSCRIPTION. Structures of the RNA polymerase- Sigma 54 reveal new and conserved regulatory strategies. Science, 349, 2015

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