Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2EFW
DownloadVisualize
BU of 2efw by Molmil
Crystal structure of the RTP:nRB complex from Bacillus subtilis
分子名称: DNA (5'-D(*DCP*DT*DAP*DTP*DGP*DTP*DAP*DCP*DCP*DAP*DAP*DAP*DTP*DGP*DTP*DTP*DCP*DAP*DGP*DTP*DC)-3'), DNA (5'-D(*DGP*DAP*DCP*DTP*DGP*DAP*DAP*DCP*DAP*DTP*DTP*DTP*DGP*DGP*DTP*DAP*DCP*DAP*DTP*DAP*DG)-3'), Replication termination protein
著者Vivian, J.P, Porter, C.J, Wilce, J.A, Wilce, M.C.J.
登録日2007-02-26
公開日2008-02-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An asymmetric structure of the Bacillus subtilis replication terminator protein in complex with DNA
J.Mol.Biol., 370, 2007
2EJ1
DownloadVisualize
BU of 2ej1 by Molmil
Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum
分子名称: CALCIUM ION, CHLORIDE ION, Endoglucanase, ...
著者Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I.
登録日2007-03-14
公開日2007-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
2BMG
DownloadVisualize
BU of 2bmg by Molmil
Crystal structure of factor Xa in complex with 50
分子名称: 3-[2-(2,4-DICHLOROPHENYL)ETHOXY]-4-METHOXY-N-[(1-PYRIDIN-4-YLPIPERIDIN-4-YL)METHYL]BENZAMIDE, CALCIUM ION, COAGULATION FACTOR X
著者Schreuder, H, Matter, H, Will, D.W, Nazare, M, Laux, V, Wehner, V, Loenze, P, Liesum, A.
登録日2005-03-14
公開日2006-03-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Requirements for Factor Xa Inhibition by 3-Oxybenzamides with Neutral P1 Substituents: Combining X-Ray Crystallography, 3D-Qsar and Tailored Scoring Functions
J.Med.Chem., 48, 2005
2BNQ
DownloadVisualize
BU of 2bnq by Molmil
Structural and kinetic basis for heightened immunogenicity of T cell vaccines
分子名称: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, SYNTHETIC PEPTIDE, ...
著者Chen, J.-L, Stewart-Jones, G, Bossi, G, Lissin, N.M, Wooldridge, L, Choi, E.M.L, Held, G, Dunbar, P.R, Esnouf, R.M, Sami, M, Boultier, J.M, Rizkallah, P.J, Renner, C, Sewell, A, van der Merwe, P.A, Jackobsen, B.K, Griffiths, G, Jones, E.Y, Cerundolo, V.
登録日2005-03-31
公開日2005-05-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Kinetic Basis for Heightened Immunogenicity of T Cell Vaccines
J.Exp.Med., 201, 2005
2BV1
DownloadVisualize
BU of 2bv1 by Molmil
Regulator of G-protein Signalling 1 (Human)
分子名称: REGULATOR OF G-PROTEIN SIGNALLING 1
著者Elkins, J.M, Yang, X, Soundararajan, M, Schoch, G.A, Haroniti, A, Sundstrom, M, Edwards, A, Arrowsmith, C, Doyle, D.A.
登録日2005-06-20
公開日2005-06-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural diversity in the RGS domain and its interaction with heterotrimeric G protein alpha-subunits.
Proc. Natl. Acad. Sci. U.S.A., 105, 2008
2BIV
DownloadVisualize
BU of 2biv by Molmil
Crystal structure of the wild-type MBT domains of Human SCML2
分子名称: IODIDE ION, SEX COMB ON MIDLEG-LIKE PROTEIN 2, SODIUM ION
著者Santiveri, C.M, Allen, M.D, Sait, F, Bycroft, M.
登録日2005-01-26
公開日2005-02-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Malignant Brain Tumor Repeats of Human Scml2 Bind to Peptides Containing Monomethylated Lysine.
J.Mol.Biol., 382, 2008
2BJS
DownloadVisualize
BU of 2bjs by Molmil
Isopenicillin N synthase C-terminal truncation mutant
分子名称: FE (III) ION, ISOPENICILLIN N SYNTHETASE, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
著者McNeill, L.A, Sami, M, Clifton, I.J, Burzlaff, N.I.
登録日2005-02-07
公開日2006-03-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Terminally Truncated Isopenicillin N Synthase Generates a Dithioester Product: Evidence for a Thioaldehyde Intermediate during Catalysis and a New Mode of Reaction for Non-Heme Iron Oxidases.
Chemistry, 23, 2017
2BT2
DownloadVisualize
BU of 2bt2 by Molmil
Structure of the regulator of G-protein signaling 16
分子名称: REGULATOR OF G-PROTEIN SIGNALING 16
著者Bunkoczi, G, Haroniti, A, Longman, E, Niesen, F, Soundararajan, M, Ball, L.J, von Delft, F, Doyle, D.A, Arrowsmith, C, Edwards, A, Sundstrom, M.
登録日2005-05-25
公開日2005-06-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Diversity in the Rgs Domain and its Interaction with Heterotrimeric G Protein Alpha- Subunits.
Proc.Natl.Acad.Sci.USA, 105, 2008
2CGP
DownloadVisualize
BU of 2cgp by Molmil
CATABOLITE GENE ACTIVATOR PROTEIN/DNA COMPLEX, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA (5'-D(*AP*TP*TP*AP*AP*TP*GP*TP*GP*AP*CP*AP*TP*AP*T)-3'), DNA (5'-D(*GP*TP*CP*AP*CP*AP*TP*TP*AP*AP*T)-3'), ...
著者Passner, J.M, Steitz, T.A.
登録日1997-01-31
公開日1998-02-04
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The structure of a CAP-DNA complex having two cAMP molecules bound to each monomer.
Proc.Natl.Acad.Sci.USA, 94, 1997
2C9V
DownloadVisualize
BU of 2c9v by Molmil
Atomic resolution structure of Cu-Zn Human Superoxide dismutase
分子名称: COPPER (II) ION, SODIUM ION, SULFATE ION, ...
著者Strange, R.W, Antonyuk, S.V, Hough, M.A, Doucette, P.A, Valentine, J.S, Hasnain, S.S.
登録日2005-12-14
公開日2005-12-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Variable Metallation of Human Superoxide Dismutase: Atomic Resolution Crystal Structures of Cu-Zn, Zn-Zn and as-Isolated Wild-Type Enzymes.
J.Mol.Biol., 356, 2006
2CGI
DownloadVisualize
BU of 2cgi by Molmil
Siras structure of tetragonal lysozyme using derivative data collected at the high energy remote Holmium Kedge
分子名称: CHLORIDE ION, LYSOZYME C
著者Jakoncic, J, Di Michiel, M, Zhong, Z, Honkimaki, V, Jouanneau, Y, Stojanoff, V.
登録日2006-03-07
公開日2006-11-13
最終更新日2019-01-23
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Anomalous Diffraction at Ultra-High Energy for Protein Crystallography.
J.Appl.Crystallogr., 39, 2006
2C7D
DownloadVisualize
BU of 2c7d by Molmil
Fitted coordinates for GroEL-ADP7-GroES Cryo-EM complex (EMD-1181)
分子名称: 10 KDA CHAPERONIN MOLECULE: GROES, PROTEIN CPN10, GROES PROTEIN, ...
著者Ranson, N.A, Clare, D.K, Farr, G.W, Houldershaw, D, Horwich, A.L, Saibil, H.R.
登録日2005-11-22
公開日2006-01-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Allosteric Signalling of ATP Hydrolysis in Groel-Groes Complexes.
Nat.Struct.Mol.Biol., 13, 2006
2CAL
DownloadVisualize
BU of 2cal by Molmil
Crystal structure of His143Met rusticyanin
分子名称: COPPER (I) ION, RUSTICYANIN
著者Barrett, M.L, Harvey, I, Sundararajan, M, Surendran, R, Hall, J.F, Ellis, M.J, Hough, M.A, Strange, R.W, Hillier, I.H, Hasnain, S.S.
登録日2005-12-21
公開日2006-01-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic Resolution Crystal Structures, Exafs, and Quantum Chemical Studies of Rusticyanin and its Two Mutants Provide Insight Into its Unusual Properties.
Biochemistry, 45, 2006
2C7N
DownloadVisualize
BU of 2c7n by Molmil
Human Rabex-5 residues 1-74 in complex with Ubiquitin
分子名称: RAB GUANINE NUCLEOTIDE EXCHANGE FACTOR 1, UBIQUITIN, ZINC ION
著者Penengo, L, Mapelli, M, Murachelli, A.G, Confalioneri, S, Magri, L, Musacchio, A, Di Fiore, P.P, Polo, S, Schneider, T.R.
登録日2005-11-25
公開日2006-02-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the Ubiquitin Binding Domains of Rabex-5 Reveals Two Modes of Interaction with Ubiquitin.
Cell(Cambridge,Mass.), 124, 2006
2DYI
DownloadVisualize
BU of 2dyi by Molmil
Crystal structure of 16S ribosomal RNA processing protein RimM from Thermus thermophilus HB8
分子名称: Probable 16S rRNA-processing protein rimM
著者Kawazoe, M, Takemoto, C, Kaminishi, T, Tatsuguchi, A, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-14
公開日2007-03-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of 16S ribosomal RNA processing protein RimM from Thermus thermophilus HB8
To be published
2E34
DownloadVisualize
BU of 2e34 by Molmil
L11 structure with RDC and RG refinement
分子名称: 50S ribosomal protein L11
著者Lee, D, Walsh, J.D, Yu, P, Markus, M.A, Choli-Papadopoulous, T, Schwieters, C.D, Krueger, S, Draper, D.E, Wang, Y.X.
登録日2006-11-20
公開日2007-06-19
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
J.Mol.Biol., 367, 2007
2E5E
DownloadVisualize
BU of 2e5e by Molmil
Solution Structure of Variable-type Domain of Human Receptor for Advanced Glycation Endproducts
分子名称: Advanced glycosylation end product-specific receptor
著者Matsumoto, S, Yoshida, T, Yasumatsu, I, Yamamoto, H, Kobayashi, Y, Ohkubo, T.
登録日2006-12-20
公開日2007-12-25
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution Structure of Variable-type Domain of Human Receptor for Advanced Glycation Endproducts
to be published
2EAX
DownloadVisualize
BU of 2eax by Molmil
Crystal structure of human PGRP-IBETAC in complex with glycosamyl muramyl pentapeptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside, GLYCOSAMYL MURAMYL PENTAPEPTIDE, Peptidoglycan recognition protein-I-beta
著者Cho, S.
登録日2007-02-03
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into the bactericidal mechanism of human peptidoglycan recognition proteins
Proc.Natl.Acad.Sci.Usa, 104, 2007
5GPI
DownloadVisualize
BU of 5gpi by Molmil
Crystal Structures of Unlinked NS2B-NS3 Protease from Zika Virus and Its Complex with a Reverse Peptide Inhibitor
分子名称: NS2B cofactor, NS3 protease
著者Phoo, W.W, Zhang, Z.Z.
登録日2016-08-02
公開日2016-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.578 Å)
主引用文献Crystal structure of unlinked NS2B-NS3 protease from Zika virus
Science, 354, 2016
2DYP
DownloadVisualize
BU of 2dyp by Molmil
Crystal Structure of LILRB2(LIR2/ILT4/CD85d) complexed with HLA-G
分子名称: 9 Mer Peptide From Histone H2A.x, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Shiroishi, M, Kuroki, K, Rasubala, L, Kohda, D, Maenaka, K.
登録日2006-09-15
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for recognition of the nonclassical MHC molecule HLA-G by the leukocyte Ig-like receptor B2 (LILRB2/LIR2/ILT4/CD85d)
Proc.Natl.Acad.Sci.Usa, 103, 2006
2E5D
DownloadVisualize
BU of 2e5d by Molmil
Crystal structure of Human NMPRTase complexed with nicotinamide
分子名称: NICOTINAMIDE, Nicotinamide phosphoribosyltransferase
著者Takahashi, R, Nakamura, S, Kobayashi, Y, Ohkubo, T.
登録日2006-12-20
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and reaction mechanism of human nicotinamide phosphoribosyltransferase
J.Biochem., 147, 2010
2BWH
DownloadVisualize
BU of 2bwh by Molmil
Laue Structure of a Short Lived State of L29W Myoglobin
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Schmidt, M, Nienhaus, K, Pahl, R, Krasselt, A, Anderson, S, Parak, F, Nienhaus, G.U, Srajer, V.
登録日2005-07-14
公開日2005-07-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Ligand migration pathway and protein dynamics in myoglobin: a time-resolved crystallographic study on L29W MbCO.
Proc. Natl. Acad. Sci. U.S.A., 102, 2005
2BOK
DownloadVisualize
BU of 2bok by Molmil
Factor Xa - cation
分子名称: COAGULATION FACTOR X, SODIUM ION, [AMINO (4-{(3AS,4R,8AS,8BR)-1,3-DIOXO-2- [3-(TRIMETHYLAMMONIO) PROPYL]DECAHYDROPYRROLO[3,4-A] PYRROLIZIN-4-YL}PHENYL) METHYLENE]AMMONIUM
著者Morgenthaler, M, Schaerer, K, Paulini, R, Obst-Sander, U, Banner, D.W, Schlatter, D, Benz, J, Stihle, M, Diederich, F.
登録日2005-04-12
公開日2005-06-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Quantification of Cation-Pi Interactions in Protein-Ligand Complexes: Crystal-Structure Analysis of Factor Xa Bound to a Quaternary Ammonium Ion Ligand
Angew.Chem.Int.Ed.Engl., 44, 2005
2BVQ
DownloadVisualize
BU of 2bvq by Molmil
Structures of Three HIV-1 HLA-B5703-Peptide Complexes and Identification of Related HLAs Potentially Associated with Long-Term Non-Progression
分子名称: BETA-2-MICROGLOBULIN, HIV-P24, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
著者Stewart-Jones, G.B, Gillespie, G, Overton, I.M, Kaul, R, Roche, P, Mcmichael, A.J, Rowland-Jones, S, Jones, E.Y.
登録日2005-07-01
公開日2005-09-07
最終更新日2019-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of three HIV-1 HLA-B*5703-peptide complexes and identification of related HLAs potentially associated with long-term nonprogression.
J Immunol., 175, 2005
2BVU
DownloadVisualize
BU of 2bvu by Molmil
D83R mutant of Asaris suum major sperm protein (MSP)
分子名称: MAJOR SPERM PROTEIN, ISOFORM ALPHA
著者Stewart, M, Grant, R.P, Roberts, T.M.
登録日2005-07-04
公開日2006-10-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Role of Filament-Packing Dynamics in Powering Amoeboid Cell Motility.
Proc.Natl.Acad.Sci.USA, 105, 2008

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon