Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3W38
DownloadVisualize
BU of 3w38 by Molmil
Sugar beet alpha-glucosidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-glucosidase, SULFATE ION, ...
著者Tagami, T, Yamashita, K, Okuyama, M, Mori, H, Yao, M, Kimura, A.
登録日2012-12-13
公開日2013-05-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Molecular basis for the recognition of long-chain substrates by plant & alpha-glucosidase
J.Biol.Chem., 288, 2013
8A8J
DownloadVisualize
BU of 8a8j by Molmil
Complex of RecF and DNA from Thermus thermophilus.
分子名称: DNA replication and repair protein RecF, MAGNESIUM ION, Oligo1, ...
著者Nirwal, S, Czarnocki-Cieciura, M, Chaudhary, A, Zajko, W, Skowronek, K, Chamera, S, Figiel, M, Nowotny, M.
登録日2022-06-23
公開日2023-04-26
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Mechanism of RecF-RecO-RecR cooperation in bacterial homologous recombination.
Nat.Struct.Mol.Biol., 30, 2023
1SHK
DownloadVisualize
BU of 1shk by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF SHIKIMATE KINASE FROM ERWINIA CHRYSANTHEMI
分子名称: MAGNESIUM ION, SHIKIMATE KINASE
著者Krell, T, Coggins, J.R, Lapthorn, A.J.
登録日1997-10-27
公開日1998-11-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallization and preliminary X-ray crystallographic analysis of shikimate kinase from Erwinia chrysanthemi.
Acta Crystallogr.,Sect.D, 53, 1997
1S30
DownloadVisualize
BU of 1s30 by Molmil
X-ray crystal structure of Desulfovibrio vulgaris Rubrerythrin with displacement of iron by zinc at the diiron Site
分子名称: FE (III) ION, Rubrerythrin, ZINC ION
著者Jin, S, Kurtz Jr, D.M, Liu, Z.-J, Rose, J, Wang, B.-C.
登録日2004-01-12
公開日2004-06-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Displacement of iron by zinc at the diiron site of Desulfovibrio vulgaris rubrerythrin: X-ray crystal structure and anomalous scattering analysis
J.Inorg.Biochem., 98, 2004
4XXF
DownloadVisualize
BU of 4xxf by Molmil
L-fuculose 1-phosphate aldolase from Glaciozyma antarctica PI12
分子名称: Fuculose-1-phosphate aldolase, ZINC ION
著者Jaafar, N.R, Abu Bakar, F.D, Abdul Murad, A.M, Illias, R, Littler, D, Beddoe, T, Rossjohn, J, Mahadi, M.N.
登録日2015-01-30
公開日2015-02-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeast Glaciozyma antarctica PI12.
Acta Crystallogr.,Sect.F, 72, 2016
1R81
DownloadVisualize
BU of 1r81 by Molmil
Glycosyltransferase A in complex with 3-amino-acceptor analog inhibitor and uridine diphosphate-N-acetyl-galactose
分子名称: Glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase, MERCURY (II) ION, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE, ...
著者Nguyen, H.P, Seto, N.O.L, Cai, Y, Leinala, E.K, Borisova, S.N, Palcic, M.M, Evans, S.V.
登録日2003-10-22
公開日2004-02-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The influence of an intramolecular hydrogen bond in differential recognition of inhibitory acceptor analogs by human ABO(H) blood group A and B glycosyltransferases
J.Biol.Chem., 278, 2003
2C1E
DownloadVisualize
BU of 2c1e by Molmil
Crystal structures of caspase-3 in complex with aza-peptide Michael acceptor inhibitors.
分子名称: AZA-PEPTIDE INHIBITOR (5S, 8R, 11S)-8-(2-CARBOXYETHYL)-5-(CARBOXYMETHYL)-14-(4-ETHOXY-4-OXOBUTANOYL)-11-(1-METHYLETHYL)-3,6,9,12-TETRAOXO-1-PHENYL-2-OXA-4,7,10,13,14-PENTAAZAHEXADECAN -16-OIC ACID, ...
著者Grutter, M.G.
登録日2005-09-14
公開日2006-09-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Design, Synthesis, and Evaluation of Aza-Peptide Michael Acceptors as Selective and Potent Inhibitors of Caspases-2, -3, -6, -7, -8, -9, and - 10.
J.Med.Chem., 49, 2006
2C2M
DownloadVisualize
BU of 2c2m by Molmil
Crystal structures of caspase-3 in complex with aza-peptide Michael acceptor inhibitors.
分子名称: AZA-PEPTIDE INHIBITOR (5S, 8R, 11S)-14-[4-(BENZYLOXY)-4-OXOBUTANOYL]-8-(2-CARBOXYETHYL)-5-(CARBOXYMETHYL)-11-(1-METHYLETHYL)-3,6,9,12-TETRAOXO-1-PHENYL-2-OXA-4,7,10,13,14 -PENTAAZAHEXADECAN-16-OIC ACID, ...
著者Ganesan, R, Jelakovic, S, Ekici, O.D, Li, Z.Z, James, K.E, Asgian, J.L, Campbell, A, Mikolajczyk, J, Salvesen, G.S, Gruetter, M.G, Powers, J.C.
登録日2005-09-29
公開日2006-09-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Design, Synthesis, and Evaluation of Aza-Peptide Michael Acceptors as Selective and Potent Inhibitors of Caspases-2, -3, -6, -7, -8, -9, and - 10.
J.Med.Chem., 49, 2006
1R1V
DownloadVisualize
BU of 1r1v by Molmil
Crystal structure of the metal-sensing transcriptional repressor CzrA from Staphylococcus aureus in the Zn2-form
分子名称: ZINC ION, repressor protein
著者Eicken, C, Pennella, M.A, Chen, X, Koshlap, K.M, VanZile, M.L, Sacchettini, J.C, Giedroc, D.P.
登録日2003-09-25
公開日2004-05-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A metal-ligand-mediated intersubunit allosteric switch in related SmtB/ArsR zinc sensor proteins.
J.Mol.Biol., 333, 2003
5EZU
DownloadVisualize
BU of 5ezu by Molmil
Crystal structure of the N-terminal domain of vaccinia virus immunomodulator A46 in complex with myristic acid.
分子名称: MYRISTIC ACID, Protein A46
著者Fedosyuk, S, Bezerra, G.A, Sammito, M, Uson, I, Skern, T.
登録日2015-11-26
公開日2016-11-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Vaccinia Virus Immunomodulator A46: A Lipid and Protein-Binding Scaffold for Sequestering Host TIR-Domain Proteins.
PLoS Pathog., 12, 2016
2DU6
DownloadVisualize
BU of 2du6 by Molmil
Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase E418N/E420N mutant complexed with tRNAAmber and O-phosphoserine ("amber complex")
分子名称: O-phosphoseryl-tRNA synthetase, PHOSPHOSERINE, tRNA
著者Fukunaga, R.
登録日2006-07-20
公開日2007-03-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural insights into the first step of RNA-dependent cysteine biosynthesis in archaea.
Nat.Struct.Mol.Biol., 14, 2007
6F62
DownloadVisualize
BU of 6f62 by Molmil
Crystal structure of the SYCP1 N-terminal head-to-head assembly in open conformation
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Synaptonemal complex protein 1
著者Dunce, J.M, Davies, O.R.
登録日2017-12-04
公開日2018-06-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.066 Å)
主引用文献Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
8JM9
DownloadVisualize
BU of 8jm9 by Molmil
The cryo-EM structure of insect gustatory receptor Gr43a from Drosophila melanogaster
分子名称: Gustatory receptor for sugar taste 43a
著者Ma, D, Guo, J.
登録日2023-06-04
公開日2024-02-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
8JMI
DownloadVisualize
BU of 8jmi by Molmil
The cryo-EM structure of insect gustatory receptor Gr64a from Drosophila melanogaster in complex with maltose
分子名称: Gustatory receptor for sugar taste 64a, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Ma, D, Guo, J.
登録日2023-06-04
公開日2024-02-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
8JMA
DownloadVisualize
BU of 8jma by Molmil
The cryo-EM structure of insect gustatory receptor Gr43a from Drosophila melanogaster in complex with fructose
分子名称: Gustatory receptor for sugar taste 43a, beta-D-fructofuranose
著者Ma, D, Guo, J.
登録日2023-06-04
公開日2024-02-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
8JME
DownloadVisualize
BU of 8jme by Molmil
The cryo-EM structure of insect gustatory receptor Gr64a from Drosophila melanogaster
分子名称: Gustatory receptor for sugar taste 64a
著者Ma, D, Guo, J.
登録日2023-06-04
公開日2024-02-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
8JMH
DownloadVisualize
BU of 8jmh by Molmil
The cryo-EM structure of insect gustatory receptor Gr64a from Drosophila melanogaster in complex with sucrose
分子名称: Gustatory receptor for sugar taste 64a, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Ma, D, Guo, J.
登録日2023-06-04
公開日2024-02-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
1RNL
DownloadVisualize
BU of 1rnl by Molmil
THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL FROM NARL
分子名称: GLYCEROL, NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL, PLATINUM (II) ION
著者Baikalov, I, Schroder, I, Kaczor-Grzeskowiak, M, Grzeskowiak, K, Gunsalus, R.P, Dickerson, R.E.
登録日1996-04-17
公開日1996-11-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the Escherichia coli response regulator NarL.
Biochemistry, 35, 1996
3F5K
DownloadVisualize
BU of 3f5k by Molmil
Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase, GLYCEROL, ...
著者Chuenchor, W, Ketudat Cairns, J.R, Pengthaisong, S, Robinson, R.C, Yuvaniyama, J, Chen, C.-J.
登録日2008-11-03
公開日2009-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structural basis of oligosaccharide binding by rice BGlu1 beta-glucosidase
J.Struct.Biol., 173, 2011
1S2Z
DownloadVisualize
BU of 1s2z by Molmil
X-ray crystal structure of Desulfovibrio vulgaris Rubrerythrin with displacement of iron by zinc at the diiron Site
分子名称: FE (III) ION, Rubrerythrin, ZINC ION
著者Jin, S, Kurtz Jr, D.M, Liu, Z.-J, Rose, J, Wang, B.-C.
登録日2004-01-12
公開日2004-06-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Displacement of iron by zinc at the diiron site of Desulfovibrio vulgaris rubrerythrin: X-ray crystal structure and anomalous scattering analysis
J.Inorg.Biochem., 98, 2004
4D5I
DownloadVisualize
BU of 4d5i by Molmil
Hypocrea jecorina cellobiohydrolase Cel7A E212Q soaked with xylotriose.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLULOSE 1,4-BETA-CELLOBIOSIDASE, COBALT (II) ION, ...
著者Momeni, M.H, Ubhayasekera, W, Stahlberg, J, Hansson, H.
登録日2014-11-05
公開日2015-03-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structural Insights Into the Inhibition of Cellobiohydrolase Cel7A by Xylooligosaccharides.
FEBS J., 282, 2015
4J2C
DownloadVisualize
BU of 4j2c by Molmil
GARP-SNARE Interaction
分子名称: Syntaxin-6, Vacuolar protein sorting-associated protein 51 homolog
著者Abascal-Palacios, G, Schindler, C, Rojas, A.L, Bonifacino, J.S, Hierro, A.
登録日2013-02-04
公開日2013-12-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structural basis for the interaction of the Golgi-Associated Retrograde Protein Complex with the t-SNARE Syntaxin 6.
Structure, 21, 2013
4NWP
DownloadVisualize
BU of 4nwp by Molmil
Computationally Designed Two-Component Self-Assembling Tetrahedral Cage, T33-21, Crystallized in Space Group R32
分子名称: AMMONIUM ION, Putative uncharacterized protein, SULFATE ION, ...
著者McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O.
登録日2013-12-06
公開日2014-05-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
6F5X
DownloadVisualize
BU of 6f5x by Molmil
Crystal structure of the SYCP1 N-terminal head-to-head assembly in closed conformation
分子名称: IODIDE ION, Synaptonemal complex protein 1, TRIETHYLENE GLYCOL
著者Ratcliff, M, Dunce, J.M, Davies, O.R.
登録日2017-12-04
公開日2018-06-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
2N0J
DownloadVisualize
BU of 2n0j by Molmil
Solution NMR Structure of the 27 nucleotide engineered neomycin sensing riboswitch RNA-ribostamycin complex
分子名称: RIBOSTAMYCIN, RNA_(27-MER)
著者Duchardt-Ferner, E, Gottstein-Schmidtke, S.R, Weigand, J.E, Ohlenschlaeger, O.E, Wurm, J, Hammann, C, Suess, B, Woehnert, J.
登録日2015-03-09
公開日2016-02-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献What a Difference an OH Makes: Conformational Dynamics as the Basis for the Ligand Specificity of the Neomycin-Sensing Riboswitch.
Angew.Chem.Int.Ed.Engl., 55, 2016

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon