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6MC2
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BU of 6mc2 by Molmil
Crystal structure of a tetrameric DNA fold-back quadruplex
分子名称: DNA (5'-D(*CP*GP*TP*AP*AP*GP*GP*CP*G)-3'), MAGNESIUM ION
著者Chu, B, Paukstelis, P.J.
登録日2018-08-30
公開日2018-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Crystal Structure of a Tetrameric DNA Fold-Back Quadruplex.
J. Am. Chem. Soc., 140, 2018
8QH3
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BU of 8qh3 by Molmil
5'vRNA-bound Hantaan virus polymerase in monomeric active state
分子名称: MAGNESIUM ION, RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*GP*AP*CP*A)-3'), RNA-directed RNA polymerase L
著者Durieux Trouilleton, Q, Arragain, B, Malet, H.
登録日2023-09-06
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Structural characterization of the oligomerization of full-length Hantaan virus polymerase into symmetric dimers and hexamers.
Nat Commun, 15, 2024
8QUH
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BU of 8quh by Molmil
Hexameric HIV-1 CA in complex with DDD00057456
分子名称: 4-methylquinolin-2-ol, Spacer peptide 1
著者Petit, A.P, Fyfe, P.K.
登録日2023-10-16
公開日2024-03-27
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Application of an NMR/Crystallography Fragment Screening Platform for the Assessment and Rapid Discovery of New HIV-CA Binding Fragments.
Chemmedchem, 19, 2024
8QUL
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BU of 8qul by Molmil
Hexameric HIV-1 CA in complex with DDD00100555
分子名称: 3-(BENZYLOXY)PYRIDIN-2-AMINE, Spacer peptide 1
著者Petit, A.P, Fyfe, P.K.
登録日2023-10-16
公開日2024-03-27
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Application of an NMR/Crystallography Fragment Screening Platform for the Assessment and Rapid Discovery of New HIV-CA Binding Fragments.
Chemmedchem, 19, 2024
5IMM
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BU of 5imm by Molmil
Nanobody targeting mouse Vsig4 in Spacegroup P212121
分子名称: Nanobody, Protein Vsig4
著者Wen, Y, Zheng, F.
登録日2016-03-06
公開日2017-01-11
最終更新日2017-07-05
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural evaluation of a nanobody targeting complement receptor Vsig4 and its cross reactivity
Immunobiology, 222, 2017
8QV1
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BU of 8qv1 by Molmil
Hexameric HIV-1 CA in complex with DDD01728505
分子名称: Spacer peptide 1, methyl 2-(2-oxidanylidene-1~{H}-quinolin-4-yl)ethanoate
著者Petit, A.P, Fyfe, P.K.
登録日2023-10-17
公開日2024-03-27
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Application of an NMR/Crystallography Fragment Screening Platform for the Assessment and Rapid Discovery of New HIV-CA Binding Fragments.
Chemmedchem, 19, 2024
5LI7
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BU of 5li7 by Molmil
Crystal structure of Mycobacterium tuberculosis CYP126A1 in complex with 1-(3-(1H-imidazol-1-yl)propyl)-3-((3s,5s,7s)-adamantan-1-yl)urea
分子名称: 1-(1-adamantyl)-3-(3-imidazol-1-ylpropyl)urea, PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450 126
著者Levy, C, Munro, A.W, Leys, D.
登録日2016-07-14
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural Characterization and Ligand/Inhibitor Identification Provide Functional Insights into the Mycobacterium tuberculosis Cytochrome P450 CYP126A1.
J. Biol. Chem., 292, 2017
8QV9
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BU of 8qv9 by Molmil
Hexameric HIV-1 CA in complex with DDD01829021
分子名称: 1,2-ETHANEDIOL, 7-bromanyl-3-(phenylmethyl)-1~{H}-benzimidazol-2-one, Spacer peptide 1
著者Petit, A.P, Fyfe, P.K.
登録日2023-10-17
公開日2024-03-27
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Application of an NMR/Crystallography Fragment Screening Platform for the Assessment and Rapid Discovery of New HIV-CA Binding Fragments.
Chemmedchem, 19, 2024
1F45
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BU of 1f45 by Molmil
HUMAN INTERLEUKIN-12
分子名称: INTERLEUKIN-12 ALPHA CHAIN, INTERLEUKIN-12 BETA CHAIN, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Yoon, C, Johnston, S.C, Tang, J, Tobin, J.F, Somers, W.S.
登録日2000-06-07
公開日2001-06-20
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Charged residues dominate a unique interlocking topography in the heterodimeric cytokine interleukin-12.
EMBO J., 19, 2000
8QUW
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BU of 8quw by Molmil
Hexameric HIV-1 CA in complex with DDD01044153
分子名称: (4~{R})-7-oxidanyl-4-phenyl-3,4-dihydro-1~{H}-quinolin-2-one, 1,2-ETHANEDIOL, Spacer peptide 1
著者Petit, A.P, Fyfe, P.K.
登録日2023-10-17
公開日2024-03-27
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Application of an NMR/Crystallography Fragment Screening Platform for the Assessment and Rapid Discovery of New HIV-CA Binding Fragments.
Chemmedchem, 19, 2024
6SCN
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BU of 6scn by Molmil
33mer structure of the Salmonella flagella MS-ring protein FliF
分子名称: Flagellar M-ring protein
著者Johnson, S, Fong, Y.H, Deme, J.C, Furlong, E.J, Kuhlen, L, Lea, S.M.
登録日2019-07-24
公開日2020-03-18
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Symmetry mismatch in the MS-ring of the bacterial flagellar rotor explains the structural coordination of secretion and rotation.
Nat Microbiol, 5, 2020
8Q1M
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BU of 8q1m by Molmil
Aplysia californica acetylcholine-binding protein in complex with Spiroimine (+)-4 R
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Soluble acetylcholine receptor, ...
著者Sulzenbacher, G, Bourne, Y, Marchot, P.
登録日2023-07-31
公開日2024-04-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Cyclic Imine Core Common to the Marine Macrocyclic Toxins Is Sufficient to Dictate Nicotinic Acetylcholine Receptor Antagonism.
Mar Drugs, 22, 2024
6AVF
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BU of 6avf by Molmil
Crystal structure of the KFJ5 TCR-NY-ESO-1-HLA-B*07:02 complex
分子名称: ALA-PRO-ARG-GLY-PRO-HIS-GLY-GLY-ALA-ALA-SER-GLY-LEU, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Gully, B.S, Gras, S, Rossjohn, J.
登録日2017-09-02
公開日2018-02-28
最終更新日2019-04-17
実験手法X-RAY DIFFRACTION (2.028 Å)
主引用文献Divergent T-cell receptor recognition modes of a HLA-I restricted extended tumour-associated peptide.
Nat Commun, 9, 2018
8QUC
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BU of 8quc by Molmil
Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT1
分子名称: (5R)-5-ethyl-3-[6-(3-methoxy-4-methyl-phenoxy)pyridin-3-yl]imidazolidine-2,4-dione, 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, CHOLESTEROL HEMISUCCINATE, ...
著者Chi, G, Mckinley, G, Marsden, B, Pike, A.C.W, Ye, M, Brooke, L.M, Bakshi, S, Pilati, N, Marasco, A, Gunthorpe, M, Alvaro, G, Large, C, Lakshminaraya, B, Williams, E, Sauer, D.B.
登録日2023-10-16
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The binding and mechanism of a positive allosteric modulator of Kv3 channels.
Nat Commun, 15, 2024
6AWL
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BU of 6awl by Molmil
Crystal structure of human Coq9
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, Ubiquinone biosynthesis protein COQ9, ...
著者Bingman, C.A, Lohman, D.C, Smith, R.W, Pagliarini, D.J, Mitochondrial Protein Partnership (MPP)
登録日2017-09-05
公開日2019-02-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An Isoprene Lipid-Binding Protein Promotes Eukaryotic Coenzyme Q Biosynthesis.
Mol. Cell, 73, 2019
8QTL
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BU of 8qtl by Molmil
Aplysia californica acetylcholine-binding protein in complex with Spiroimine (-)-4 S
分子名称: CHLORIDE ION, ISOPROPYL ALCOHOL, Soluble acetylcholine receptor, ...
著者Sulzenbacher, G, Bourne, Y, Marchot, P.
登録日2023-10-12
公開日2024-04-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The Cyclic Imine Core Common to the Marine Macrocyclic Toxins Is Sufficient to Dictate Nicotinic Acetylcholine Receptor Antagonism.
Mar Drugs, 22, 2024
6ZYT
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BU of 6zyt by Molmil
Monomeric streptavidin with a conjugated biotinylated pyrrolidine
分子名称: 5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-N-((S)-pyrrolidin-3-yl)pentanamide, SULFATE ION, Streptavidin/Rhizavidin Hybrid
著者Nodling, A.R, Lipka-Lloyd, M, Tsai, Y.H, Rizkallah, P, Luk, L.Y.P, Jin, Y.
登録日2020-08-03
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The role of streptavidin and its variants in catalysis by biotinylated secondary amines.
Org.Biomol.Chem., 19, 2021
6B14
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BU of 6b14 by Molmil
Crystal structure of Spinach RNA aptamer in complex with Fab BL3-6S97N
分子名称: Heavy chain of Fab BL3-6S97N, Light chain of Fab BL3-6S97N, MAGNESIUM ION, ...
著者DasGupta, S, Shelke, S.A, Piccirilli, J.A.
登録日2017-09-16
公開日2017-12-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Affinity maturation of a portable Fab-RNA module for chaperone-assisted RNA crystallography.
Nucleic Acids Res., 46, 2018
6B1G
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BU of 6b1g by Molmil
Solution structure of TDP-43 N-terminal domain dimer.
分子名称: TAR DNA-binding protein 43, S48E Mutant, Y4R Mutant
著者Naik, M.T, Wang, A, Conicella, A, Fawzi, N.L.
登録日2017-09-18
公開日2018-02-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A single N-terminal phosphomimic disrupts TDP-43 polymerization, phase separation, and RNA splicing.
EMBO J., 37, 2018
6M92
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BU of 6m92 by Molmil
Monophosphorylated pSer33 b-Catenin peptide, b-TrCP/Skp1, NRX-2663 ternary complex
分子名称: 3-{[2-oxo-4-phenoxy-6-(trifluoromethyl)-1,2-dihydropyridine-3-carbonyl]amino}benzoic acid, Catenin beta-1, F-box/WD repeat-containing protein 1A, ...
著者Simonetta, K.R, Clifton, M.C, Walter, R.L, Ranieri, G.M, Carter, J.J, Lee, S.J.
登録日2018-08-22
公開日2019-04-03
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Prospective discovery of small molecule enhancers of an E3 ligase-substrate interaction.
Nat Commun, 10, 2019
6ZYU
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BU of 6zyu by Molmil
Structure of the GluA2 ligand-binding domain (L483Y-N754S) in complex with glutamate and BPAM549
分子名称: (4~{R})-4-cyclopropyl-7-fluoranyl-3,4-dihydro-2~{H}-thiochromene 1,1-dioxide, (4~{S})-4-cyclopropyl-7-fluoranyl-3,4-dihydro-2~{H}-thiochromene 1,1-dioxide, ACETATE ION, ...
著者Dorosz, J, Christensen, K.M, Kastrup, J.S.
登録日2020-08-03
公開日2021-08-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Development of Thiochroman Dioxide Analogues of Benzothiadiazine Dioxides as New Positive Allosteric Modulators of alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid (AMPA) Receptors.
Acs Chem Neurosci, 12, 2021
1EZG
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BU of 1ezg by Molmil
CRYSTAL STRUCTURE OF ANTIFREEZE PROTEIN FROM THE BEETLE, TENEBRIO MOLITOR
分子名称: THERMAL HYSTERESIS PROTEIN ISOFORM YL-1
著者Liou, Y.-C, Tocilj, A, Davies, P.L, Jia, Z.
登録日2000-05-10
公開日2000-08-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Mimicry of ice structure by surface hydroxyls and water of a beta-helix antifreeze protein.
Nature, 406, 2000
5IH2
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BU of 5ih2 by Molmil
Structure, thermodynamics, and the role of conformational dynamics in the interactions between the N-terminal SH3 domain of CrkII and proline-rich motifs in cAbl
分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Adapter molecule crk, DI(HYDROXYETHYL)ETHER, ...
著者Bhatt, V.S, Zeng, D, Krieger, I, Sacchettini, J.C, Cho, J.-H.
登録日2016-02-28
公開日2016-06-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Binding Mechanism of the N-Terminal SH3 Domain of CrkII and Proline-Rich Motifs in cAbl.
Biophys.J., 110, 2016
6M09
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BU of 6m09 by Molmil
The ligand-free structure of the chloroplast protein At3g03890
分子名称: AT3G03890 protein
著者Wang, J, Liu, L.
登録日2020-02-20
公開日2020-12-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献The Arabidopsis locus AT3G03890 encodes a dimeric beta-barrel protein implicated in heme degradation.
Biochem.J., 2020
7K0T
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BU of 7k0t by Molmil
Cryo-EM structure of rabbit RyR1 in the presence of AMP-PCP in nanodisc
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, RyR1, ZINC ION
著者Nayak, A.R, Samso, M.
登録日2020-09-05
公開日2021-09-22
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Ca 2+ -inactivation of the mammalian ryanodine receptor type 1 in a lipidic environment revealed by cryo-EM.
Elife, 11, 2022

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