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7DWS
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The structure of T4 Lysozyme I3C/C54T/R125C/E128C complex with Zinc ions
分子名称: Endolysin, ZINC ION
著者Chen, X, Chen, S.
登録日2021-01-17
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Rationally designed protein cross-linked hydrogel for bone regeneration via synergistic release of magnesium and zinc ions.
Biomaterials, 274, 2021
7ECH
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Crystal Structure of d(G4C2)2-K in F222 space group
分子名称: DNA (5'-D(*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*CP*C)-3'), POTASSIUM ION
著者Geng, Y, Liu, C, Cai, Q, Luo, Z, Zhu, G.
登録日2021-03-12
公開日2021-06-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal structure of parallel G-quadruplex formed by the two-repeat ALS- and FTD-related GGGGCC sequence.
Nucleic Acids Res., 49, 2021
7ECG
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Crystal Structure of d(G4C2)2-Ba in F222 space group
分子名称: BARIUM ION, DNA (5'-D(*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*CP*C)-3')
著者Geng, Y, Liu, C, Cai, Q, Luo, Z, Zhu, G.
登録日2021-03-12
公開日2021-06-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structure of parallel G-quadruplex formed by the two-repeat ALS- and FTD-related GGGGCC sequence.
Nucleic Acids Res., 49, 2021
5OW9
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Vitamin D receptor complex
分子名称: (1~{S},3~{Z})-3-[(2~{E})-2-[(1~{S},3~{a}~{S},7~{a}~{S})-7~{a}-methyl-1-[(2~{S})-6-methyl-2-oxidanyl-heptan-2-yl]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexan-1-ol, Nuclear receptor coactivator 1, Vitamin D3 receptor A
著者Rochel, N, Li, W.
登録日2017-08-31
公開日2018-02-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.403 Å)
主引用文献Investigation of 20S-hydroxyvitamin D3 analogs and their 1 alpha-OH derivatives as potent vitamin D receptor agonists with anti-inflammatory activities.
Sci Rep, 8, 2018
7D8O
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Crystal structure of E. coli ToxIN type III toxin-antitoxin complex
分子名称: Antitoxin RNA, Type III toxin-antitoxin system ToxN/AbiQ family toxin
著者Manikandan, P, Rothweiler, U, Singh, M.
登録日2020-10-08
公開日2022-01-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Identification, functional characterization, assembly and structure of ToxIN type III toxin-antitoxin complex from E. coli.
Nucleic Acids Res., 50, 2022
7DBH
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The mouse nucleosome structure containing H3mm18
分子名称: DNA (126-MER), Histone H2A type 1-B, Histone H2B type 3-A, ...
著者Hirai, S, Takizawa, Y, Kujirai, T, Kurumizaka, H.
登録日2020-10-20
公開日2022-01-19
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Unusual nucleosome formation and transcriptome influence by the histone H3mm18 variant.
Nucleic Acids Res., 50, 2022
7DRC
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Cryo-EM structure of plant receptor like protein RXEG1 in complex with xyloglucanase XEG1 and BAK1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Brassinosteroid insensitive 1-associated receptor kinase 1, ...
著者Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J.
登録日2020-12-27
公開日2022-06-22
最終更新日2022-10-26
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Plant receptor-like protein activation by a microbial glycoside hydrolase.
Nature, 610, 2022
7E8P
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Crystal structure of a Flavin-dependent Monooxygenase HadA wild type complexed with reduced FAD and 4-nitrophenol
分子名称: Chlorophenol monooxygenase, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, P-NITROPHENOL
著者Pimviriyakul, P, Jaruwat, A, Chitnumsub, P, Chaiyen, P.
登録日2021-03-02
公開日2021-07-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into a flavin-dependent dehalogenase HadA explain catalysis and substrate inhibition via quadruple pi-stacking.
J.Biol.Chem., 297, 2021
7ELD
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Cryo-EM structure of Arabidopsis DCL1 in complex with pri-miRNA 166f
分子名称: Endoribonuclease Dicer homolog 1, pri-miRNA 166f
著者Wei, X, Ke, H, Feng, Y.
登録日2021-04-09
公開日2021-08-11
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis of microRNA processing by Dicer-like 1.
Nat.Plants, 7, 2021
7BR7
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Epstein-Barr virus, C1 portal-proximal penton vertex, CATC binding
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Li, Z, Yu, X.
登録日2020-03-26
公開日2020-09-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BSB
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BU of 7bsb by Molmil
Mevo lectin- Native form-2
分子名称: 1,2-ETHANEDIOL, GLYCEROL, lectin
著者Sivaji, N, Suguna, K, Surolia, A, Vijayan, M.
登録日2020-03-30
公開日2021-02-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural and related studies on Mevo lectin from Methanococcus voltae A3: the first thorough characterization of an archeal lectin and its interactions.
Glycobiology, 31, 2021
7C28
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Unusual quaternary structure of a homodimeric synergistic toxin from mamba snake venom
分子名称: SULFATE ION, Synergistic-type venom protein S2C4
著者Jobichen, C, Narumi, A, Sivaraman, J, Kini, R.M.
登録日2020-05-07
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Unusual quaternary structure of a homodimeric synergistic-type toxin from mamba snake venom defines its molecular evolution.
Biochem.J., 477, 2020
7BXT
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The cryo-EM structure of CENP-A nucleosome in complex with CENP-C peptide and CENP-N N-terminal domain
分子名称: CENP-C, DNA (145-mer), Histone H2A type 1-B/E, ...
著者Ariyoshi, M, Makino, F, Fukagawa, T.
登録日2020-04-20
公開日2021-02-10
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of the CENP-A nucleosome in complex with phosphorylated CENP-C.
Embo J., 40, 2021
7BSM
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Mevo lectin complex with 2alpha-mannobiose
分子名称: ALANINE, alpha-D-mannopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose, ...
著者Sivaji, N, Suguna, K, Surolia, A, Vijayan, M.
登録日2020-03-31
公開日2021-02-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and related studies on Mevo lectin from Methanococcus voltae A3: the first thorough characterization of an archeal lectin and its interactions.
Glycobiology, 31, 2021
7BEL
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BU of 7bel by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-88 and COVOX-45 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, COVOX-45 heavy chain, ...
著者Zhou, D, Zhao, Y, Ren, J, Stuart, D.
登録日2020-12-23
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献The antigenic anatomy of SARS-CoV-2 receptor binding domain.
Cell, 184, 2021
7DKZ
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Structure of plant photosystem I-light harvesting complex I supercomplex
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Wang, J, Yu, L.J, Wang, W.
登録日2020-11-25
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.393 Å)
主引用文献Structure of plant photosystem I-light harvesting complex I supercomplex at 2.4 angstrom resolution.
J Integr Plant Biol, 63, 2021
7DYA
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BU of 7dya by Molmil
Crystal structure of TmFtn with calcium ions
分子名称: CALCIUM ION, FE (III) ION, Ferritin
著者Zhang, X, Zhao, G.
登録日2021-01-20
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Protein interface redesign facilitates the transformation of nanocage building blocks to 1D and 2D nanomaterials.
Nat Commun, 12, 2021
7DXT
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Crystal structure of the chemically synthesized mk2h peptide homodimer
分子名称: mk2h protein
著者Yagi, S, Tagami, S.
登録日2021-01-20
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase.
J.Am.Chem.Soc., 143, 2021
7ELL
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BU of 7ell by Molmil
In situ structure of capping enzyme lambda2, penetration protein mu1 of mammalian reovirus capsid asymmetric unit.
分子名称: MYRISTIC ACID, Mu1, mRNA (guanine-N(7)-)-methyltransferase
著者Zhou, Z.H, Pan, M.
登録日2021-04-12
公開日2021-10-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Asymmetric reconstruction of mammalian reovirus reveals interactions among RNA, transcriptional factor mu2 and capsid proteins.
Nat Commun, 12, 2021
7DTE
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SARS-CoV-2 RdRP catalytic complex with T33-1 RNA
分子名称: Non-structural protein 7, Non-structural protein 8, RNA (33-MER), ...
著者Wang, Q, Gong, P.
登録日2021-01-04
公開日2021-10-20
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Remdesivir overcomes the S861 roadblock in SARS-CoV-2 polymerase elongation complex.
Cell Rep, 37, 2021
7E8Z
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Crystal structure of the human fat mass and obesity associated protein (FTO) in complex with SS81
分子名称: 2-[[6-[(4-nitrophenyl)amino]-3-oxidanyl-pyridin-2-yl]carbonylamino]ethanoic acid, Alpha-ketoglutarate-dependent dioxygenase FTO, ZINC ION
著者Tam, N.Y, Ng, Y.M, Shishodia, S, McDonough, M.A, Schofield, C.J, Aik, W.S.
登録日2021-03-03
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure-Based Design of Selective Fat Mass and Obesity Associated Protein (FTO) Inhibitors.
J.Med.Chem., 64, 2021
7E8D
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NSD2 E1099K mutant bound to nucleosome
分子名称: DNA (185-MER), Histone H2A type 1, Histone H2B type 1-J, ...
著者Sengoku, T, Sato, K, Nishizawa, T, Nureki, O, Ogata, K.
登録日2021-03-01
公開日2021-11-10
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of the regulation of the normal and oncogenic methylation of nucleosomal histone H3 Lys36 by NSD2.
Nat Commun, 12, 2021
7DY6
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A refined cryo-EM structure of an Escherichia coli RNAP-promoter open complex (RPo) with SspA
分子名称: DNA (63-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Lin, W.
登録日2021-01-20
公開日2021-11-17
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献A unique binding between SspA and RNAP beta' NTH across low-GC Gram-negative bacteria facilitates SspA-mediated transcription regulation.
Biochem.Biophys.Res.Commun., 583, 2021
7EA7
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crystal structure of NAP1 LIR in complex with GABARAP
分子名称: Gamma-aminobutyric acid receptor-associated protein, NAP1_LIR motif
著者Fu, T, Pan, L.
登録日2021-03-06
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural and biochemical advances on the recruitment of the autophagy-initiating ULK and TBK1 complexes by autophagy receptor NDP52.
Sci Adv, 7, 2021
7EAA
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crystal structure of NDP52 SKICH domain in complex with RB1CC1 coiled-coil domain
分子名称: Calcium-binding and coiled-coil domain-containing protein 2, RB1-inducible coiled-coil protein 1
著者Fu, T, Pan, L.
登録日2021-03-06
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and biochemical advances on the recruitment of the autophagy-initiating ULK and TBK1 complexes by autophagy receptor NDP52.
Sci Adv, 7, 2021

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