Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7CUC
DownloadVisualize
BU of 7cuc by Molmil
Crystal Structure of Urate Oxidase from Bacillus sp. TB-90 in the absence from Chloride Anion at 1.44 A resolution
分子名称: 2-METHOXYETHANOL, 8-AZAXANTHINE, OXYGEN MOLECULE, ...
著者Hibi, T, Itoh, T.
登録日2020-08-22
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Identification of quasi-stable water molecules near the Thr73-Lys13 catalytic diad of Bacillus sp. TB-90 urate oxidase by X-ray crystallography with controlled humidity.
J.Biochem., 169, 2021
6CYH
DownloadVisualize
BU of 6cyh by Molmil
Hsp90-alpha N-domain bound to NEACA
分子名称: 5'-N-[(2-AMINO)ETHYL CARBOXAMIDO] ADENOSINE, Heat shock protein HSP 90-alpha, MAGNESIUM ION
著者Huck, J.D, Campomizzi, C, Gewirth, D.T.
登録日2018-04-05
公開日2019-04-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献NECA derivatives exploit the paralog-specific properties of the site 3 side pocket of Grp94, the endoplasmic reticulum Hsp90.
J.Biol.Chem., 294, 2019
3KW4
DownloadVisualize
BU of 3kw4 by Molmil
Crystal structure of cytochrome 2B4 in complex with the anti-platelet drug ticlopidine
分子名称: 2-{[(3alpha,5alpha,7alpha,8alpha,10alpha,12alpha,17alpha)-3,12-bis{2-[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]ethoxy}cholan-7-yl]oxy}ethyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B4, ...
著者Gay, S.C, Maekawa, K, Roberts, A.G, Hong, W.-X, Zhang, Q, Stout, C.D, Halpert, J.R.
登録日2009-11-30
公開日2010-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structures of cytochrome P450 2B4 complexed with the antiplatelet drugs ticlopidine and clopidogrel.
Biochemistry, 49, 2010
2W9G
DownloadVisualize
BU of 2w9g by Molmil
Wild-type Staphylococcus aureus DHFR in complex with NADPH and trimethoprim
分子名称: DIHYDROFOLATE REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIMETHOPRIM
著者Soutter, H.H, Miller, J.R.
登録日2009-01-23
公開日2009-03-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Comparison of Chromosomal and Exogenous Dihydrofolate Reductase from Staphylococcus Aureus in Complex with the Potent Inhibitor Trimethoprim.
Proteins, 76, 2009
5J4X
DownloadVisualize
BU of 5j4x by Molmil
Structure of tetrameric jacalin complexed with Gal beta-(1,3) Gal-beta-OMe
分子名称: 1,2-ETHANEDIOL, Agglutinin alpha chain, Agglutinin beta-3 chain, ...
著者Abhinav, K.V, Sharma, K, Surolia, A, Vijayan, M.
登録日2016-04-01
公開日2017-02-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Distortion of the ligand molecule as a strategy for modulating binding affinity: Further studies involving complexes of jacalin with beta-substituted disaccharides.
IUBMB Life, 69, 2017
6JZB
DownloadVisualize
BU of 6jzb by Molmil
Structural characterization of DnaJ from Streptococcus pneumonia presents a new tetramer of Hsp40 family
分子名称: Chaperone protein DnaJ, ZINC ION
著者Zhu, M, Zhu, Z.L.
登録日2019-04-30
公開日2020-11-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.754 Å)
主引用文献Structural insights into the formation of oligomeric state by a type I Hsp40 chaperone.
Biochimie, 176, 2020
2W9H
DownloadVisualize
BU of 2w9h by Molmil
Wild-type Staphylococcus aureus DHFR in complex with trimethoprim
分子名称: 1,2-ETHANEDIOL, DIHYDROFOLATE REDUCTASE, TRIMETHOPRIM
著者Soutter, H.H, Miller, J.R.
登録日2009-01-23
公開日2009-03-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural Comparison of Chromosomal and Exogenous Dihydrofolate Reductase from Staphylococcus Aureus in Complex with the Potent Inhibitor Trimethoprim.
Proteins, 76, 2009
6UBO
DownloadVisualize
BU of 6ubo by Molmil
Fluorogen Activating Protein Dib1
分子名称: 12-(diethylamino)-2,2-bis(fluoranyl)-4,5-dimethyl-5-aza-3-azonia-2-boranuidatricyclo[7.4.0.0^{3,7}]trideca-1(13),3,7,9,11-pentaen-6-one, CITRIC ACID, Outer membrane lipoprotein Blc, ...
著者Muslinkina, L, Pletneva, N, Pletnev, V.Z, Pletnev, S.
登録日2019-09-12
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure-Based Rational Design of Two Enhanced Bacterial Lipocalin Blc Tags for Protein-PAINT Super-resolution Microscopy.
Acs Chem.Biol., 15, 2020
1ZQ1
DownloadVisualize
BU of 1zq1 by Molmil
Structure of GatDE tRNA-Dependent Amidotransferase from Pyrococcus abyssi
分子名称: ASPARTIC ACID, Glutamyl-tRNA(Gln) amidotransferase subunit D, Glutamyl-tRNA(Gln) amidotransferase subunit E
著者Schmitt, E, Panvert, M, Blanquet, S, Mechulam, Y.
登録日2005-05-18
公開日2005-10-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Basis for tRNA-Dependent Amidotransferase Function
Structure, 13, 2005
6SXR
DownloadVisualize
BU of 6sxr by Molmil
E221Q mutant of GH54 a-l-arabinofuranosidase soaked with 4-nitrophenyl a-l-arabinofuranoside
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者McGregor, N.G.S, Davies, G.J, Nin-Hill, A, Rovira, C.
登録日2019-09-26
公開日2020-02-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Rational Design of Mechanism-Based Inhibitors and Activity-Based Probes for the Identification of Retaining alpha-l-Arabinofuranosidases.
J.Am.Chem.Soc., 142, 2020
6GNE
DownloadVisualize
BU of 6gne by Molmil
Catalytic domain of Starch Synthase IV from Arabidopsis thaliana bound to ADP and acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Probable starch synthase 4, ...
著者Cuesta-Seijo, J.A, Ruzanski, C, Krucewicz, K, Striebeck, A, Palcic, M.M.
登録日2018-05-30
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal Structures of theCatalyticDomain ofArabidopsis thalianaStarch Synthase IV, of Granule Bound Starch Synthase From CLg1 and of Granule Bound Starch Synthase I ofCyanophora paradoxaIllustrate Substrate Recognition in Starch Synthases.
Front Plant Sci, 9, 2018
3HQJ
DownloadVisualize
BU of 3hqj by Molmil
Structure-function analysis of Mycobacterium tuberculosis acyl carrier protein synthase (AcpS).
分子名称: COENZYME A, Holo-[acyl-carrier-protein] synthase, MAGNESIUM ION
著者Dym, O, Albeck, S, Peleg, Y, Schwarz, A, Shakked, Z, Burstein, Y, Zimhony, O, Israel Structural Proteomics Center (ISPC)
登録日2009-06-07
公開日2009-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-function analysis of the acyl carrier protein synthase (AcpS) from Mycobacterium tuberculosis.
J.Mol.Biol., 393, 2009
6QXH
DownloadVisualize
BU of 6qxh by Molmil
Crystal structure of His-tag human thymidylate synthase (HT-hTS) in complex with dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Pozzi, C, Mangani, M.
登録日2019-03-07
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities.
Molecules, 24, 2019
6QXG
DownloadVisualize
BU of 6qxg by Molmil
Crystal structure of His-tag human thymidylate synthase (HT-hTS) in complex with FdUMP
分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, SULFATE ION, Thymidylate synthase
著者Pozzi, C, Mangani, M.
登録日2019-03-07
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities.
Molecules, 24, 2019
1XYA
DownloadVisualize
BU of 1xya by Molmil
X-RAY CRYSTALLOGRAPHIC STRUCTURES OF D-XYLOSE ISOMERASE-SUBSTRATE COMPLEXES POSITION THE SUBSTRATE AND PROVIDE EVIDENCE FOR METAL MOVEMENT DURING CATALYSIS
分子名称: HYDROXIDE ION, MAGNESIUM ION, XYLOSE ISOMERASE
著者Lavie, A, Allen, K.N, Petsko, G.A, Ringe, D.
登録日1994-01-03
公開日1994-05-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the substrate and provide evidence for metal movement during catalysis.
Biochemistry, 33, 1994
6GNG
DownloadVisualize
BU of 6gng by Molmil
Granule Bound Starch Synthase I from Cyanophora paradoxa bound to acarbose and ADP
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Granule-bound starch synthase
著者Cuesta-Seijo, J.A, Nielsen, M.M, Palcic, M.M.
登録日2018-05-30
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal Structures of theCatalyticDomain ofArabidopsis thalianaStarch Synthase IV, of Granule Bound Starch Synthase From CLg1 and of Granule Bound Starch Synthase I ofCyanophora paradoxaIllustrate Substrate Recognition in Starch Synthases.
Front Plant Sci, 9, 2018
1UXP
DownloadVisualize
BU of 1uxp by Molmil
Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax
分子名称: ADENOSINE MONOPHOSPHATE, GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Lorentzen, E, Hensel, R, Pohl, E.
登録日2004-02-27
公開日2004-08-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural Basis of Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde 3-Phosphate Dehydrogenase from Thermoproteus Tenax
J.Mol.Biol., 341, 2004
1Y22
DownloadVisualize
BU of 1y22 by Molmil
T-To-T(High) quaternary transitions in human hemoglobin: betaV33A deoxy low-salt (1 test set)
分子名称: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
著者Kavanaugh, J.S, Rogers, P.H, Arnone, A.
登録日2004-11-19
公開日2004-12-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
3HMJ
DownloadVisualize
BU of 3hmj by Molmil
Saccharomyces cerevisiae FAS type I
分子名称: (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE, FLAVIN MONONUCLEOTIDE, ...
著者Johansson, P, Mulinacci, B, Koestler, C, Vollrath, R, Oesterhelt, D, Grininger, M.
登録日2009-05-29
公開日2009-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Multimeric options for the auto-activation of the Saccharomyces cerevisiae FAS type I megasynthase
Structure, 17, 2009
1Y1D
DownloadVisualize
BU of 1y1d by Molmil
Crystal structure of transthyretin in complex with iododiflunisal
分子名称: 2',4'-DIFLUORO-4-HYDROXY-5-IODO-1,1'-BIPHENYL-3-CARBOXYLIC ACID, Transthyretin
著者Gales, L, Macedo-Ribeiro, S, Arsequell, G, Valencia, G, Saraiva, M.J, Damas, A.M.
登録日2004-11-18
公開日2005-07-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Human transthyretin in complex with iododiflunisal: structural features associated with a potent amyloid inhibitor.
Biochem.J., 388, 2005
7CQZ
DownloadVisualize
BU of 7cqz by Molmil
crystal structure of mouse FAM46C (TENT5C)
分子名称: CHLORIDE ION, GLYCEROL, Terminal nucleotidyltransferase 5C
著者Hu, J.L, Zhang, H, Gao, S.
登録日2020-08-12
公開日2021-06-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.34969759 Å)
主引用文献Structural and functional characterization of multiple myeloma associated cytoplasmic poly(A) polymerase FAM46C.
Cancer Commun (Lond), 41, 2021
3I2A
DownloadVisualize
BU of 3i2a by Molmil
Crystal structure of a chimeric trypsin inhibitor protein STI(L)-WCI(S)
分子名称: CHLORIDE ION, Chymotrypsin inhibitor 3
著者Sen, U, Khamrui, S.
登録日2009-06-29
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification of a novel set of scaffolding residues that are instrumental for the inhibitory property of Kunitz (STI) inhibitors.
Protein Sci., 19, 2010
6GNF
DownloadVisualize
BU of 6gnf by Molmil
Granule Bound Starch Synthase from Cyanobacterium sp. CLg1 bound to acarbose and ADP
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Glycogen synthase, ...
著者Cuesta-Seijo, J.A, Nielsen, M.M, Palcic, M.M.
登録日2018-05-30
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structures of theCatalyticDomain ofArabidopsis thalianaStarch Synthase IV, of Granule Bound Starch Synthase From CLg1 and of Granule Bound Starch Synthase I ofCyanophora paradoxaIllustrate Substrate Recognition in Starch Synthases.
Front Plant Sci, 9, 2018
3I2X
DownloadVisualize
BU of 3i2x by Molmil
Crystal structure of a chimeric trypsin inhibitor having reactive site loop of ETI on the scaffold of WCI
分子名称: Chymotrypsin inhibitor 3
著者Sen, U, Khamrui, S, Dasgupta, J, Dattagupta, J.K, Majumder, S.
登録日2009-06-30
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Identification of a novel set of scaffolding residues that are instrumental for the inhibitory property of Kunitz (STI) inhibitors.
Protein Sci., 19, 2010
1UXV
DownloadVisualize
BU of 1uxv by Molmil
Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax
分子名称: ADENOSINE MONOPHOSPHATE, GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Lorentzen, E, Hensel, R, Pohl, E.
登録日2004-03-01
公開日2004-08-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural Basis of Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde 3-Phosphate Dehydrogenase from Thermoproteus Tenax
J.Mol.Biol., 341, 2004

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon