PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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6KH5	Design and crystal structure of protein MOFs with ferritin nanocages as linkers and nickel clusters as nodes 分子名称: FE (III) ION, Ferritin, NICKEL (II) ION 著者 Gu, C, Chen, H, Wang, Y, Zhang, T, Wang, H, Zhao, G. 登録日 2019-07-12 公開日 2020-01-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.294 Å) 主引用文献 Structural Insight into Binary Protein Metal-Organic Frameworks with Ferritin Nanocages as Linkers and Nickel Clusters as Nodes. Chemistry, 26, 2020
6HV5	Yeast 20S proteasome with human beta2i (1-53) in complex with 4 分子名称: (2~{S})-~{N}-[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2018-10-10 公開日 2019-01-30 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits. J.Med.Chem., 62, 2019
6HW7	Yeast 20S proteasome in complex with 29 分子名称: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ... 著者 Huber, E.M, Groll, M. 登録日 2018-10-11 公開日 2019-01-30 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits. J.Med.Chem., 62, 2019
7M2H	Structural Snapshots of Intermediates in the Gating of a K+ Channel 分子名称: DIACYL GLYCEROL, Fab heavy chain, Fab light chain, ... 著者 Reddi, R, Valiyaveetil, F.I. 登録日 2021-03-16 公開日 2021-10-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.642 Å) 主引用文献 Structures of Gating Intermediates in a K + channell. J.Mol.Biol., 433, 2021
3QP3	Crystal structure of titin domain M4, tetragonal form 分子名称: SULFATE ION, Titin 著者 Sauer, F, Kolodziejczyk, A, Wilmanns, M. 登録日 2011-02-11 公開日 2012-02-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.997 Å) 主引用文献 Crystal structure of titin domain M4, tetragonal form To be Published
6HTO	Tryptophan lyase 'empty state' 分子名称: 3-methyl-2-indolic acid synthase, 5'-DEOXYADENOSINE, CHLORIDE ION, ... 著者 Amara, P, Mouesca, J.M, Bella, M, Martin, L, Saragaglia, C, Gambarelli, S, Nicolet, Y. 登録日 2018-10-04 公開日 2018-11-21 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Radical S-Adenosyl-l-methionine Tryptophan Lyase (NosL): How the Protein Controls the Carboxyl Radical •CO2-Migration. J.Am.Chem.Soc., 140, 2018
7MK1	Structure of a protein-modified aptamer complex 分子名称: Antiviral innate immune response receptor RIG-I, DNA (41-MER), MAGNESIUM ION, ... 著者 Ren, X, Pyle, A.M. 登録日 2021-04-21 公開日 2021-11-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Evolving A RIG-I Antagonist: A Modified DNA Aptamer Mimics Viral RNA. J.Mol.Biol., 433, 2021
6KMV	caspase-11 C254A P22/P10 in complex with mouse GSDMD-C domain 分子名称: Caspase-4, Gasdermin-D 著者 Ding, J, Sun, Q. 登録日 2019-08-01 公開日 2020-03-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Structural Mechanism for GSDMD Targeting by Autoprocessed Caspases in Pyroptosis. Cell, 180, 2020
7M7E	6-Deoxyerythronolide B synthase (DEBS) hybrid module (M3/1) in complex with antibody fragment 1B2 分子名称: 1B2 (heavy chain), 1B2 (light chain), 6-deoxyerythronolide-B synthase EryA2, ... 著者 Cogan, D.P, Zhang, K, Chiu, W, Khosla, C. 登録日 2021-03-28 公開日 2021-11-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Mapping the catalytic conformations of an assembly-line polyketide synthase module. Science, 374, 2021
7M7H	6-Deoxyerythronolide B synthase (DEBS) module 1 in complex with antibody fragment 1B2: State 1' 分子名称: 1B2 (heavy chain), 1B2 (light chain), EryAI,6-deoxyerythronolide-B synthase EryA3, ... 著者 Cogan, D.P, Zhang, K, Chiu, W, Khosla, C. 登録日 2021-03-28 公開日 2021-11-17 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Mapping the catalytic conformations of an assembly-line polyketide synthase module. Science, 374, 2021
6HVR	Yeast 20S proteasome with human beta2i (1-53) in complex with 16 分子名称: (2~{S})-~{N}-[(2~{S},3~{R})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-2-[[(2~{R})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2018-10-11 公開日 2019-01-30 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits. J.Med.Chem., 62, 2019
7M7G	6-Deoxyerythronolide B synthase (DEBS) module 1 in complex with antibody fragment 1B2: State 2 分子名称: 1B2 (heavy chain), 1B2 (light chain), EryAI,6-deoxyerythronolide-B synthase EryA3, ... 著者 Cogan, D.P, Zhang, K, Chiu, W, Khosla, C. 登録日 2021-03-28 公開日 2021-11-17 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Mapping the catalytic conformations of an assembly-line polyketide synthase module. Science, 374, 2021
6HVY	Yeast 20S proteasome in complex with 5 (7- and 6-membered ring) 分子名称: (2~{S})-~{N}-[(2~{S},3~{R})-1-[(1~{S},4~{a}~{S},8~{a}~{R})-1,2,3,4,4~{a},5,6,7,8,8~{a}-decahydronaphthalen-1-yl]-4-methyl-3,4-bis(oxidanyl)pentan-2-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide, (2~{S})-~{N}-[(2~{S},3~{S},4~{R})-1-[(1~{S},4~{a}~{S},8~{a}~{R})-1,2,3,4,4~{a},5,6,7,8,8~{a}-decahydronaphthalen-1-yl]-4-methyl-3,5-bis(oxidanyl)pentan-2-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ... 著者 Huber, E.M, Groll, M. 登録日 2018-10-11 公開日 2019-01-30 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits. J.Med.Chem., 62, 2019
6HWC	Yeast 20S proteasome beta2-G45A mutant 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2018-10-11 公開日 2019-01-30 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits. J.Med.Chem., 62, 2019
7MIB	Half integration complex of Cas4/Cas1/Cas2 with Cas4 still on the Non-PAM side 分子名称: CRISPR-associated endoribonuclease Cas2, CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion, DNA (31-MER), ... 著者 Hu, C.Y, Ke, A.K. 登録日 2021-04-16 公開日 2021-11-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Mechanism for Cas4-assisted directional spacer acquisition in CRISPR-Cas. Nature, 598, 2021
7M7F	6-Deoxyerythronolide B synthase (DEBS) module 1 in complex with antibody fragment 1B2: State 1 分子名称: 1B2 (heavy chain), 1B2 (light chain), EryAI,6-deoxyerythronolide-B synthase EryA3, ... 著者 Cogan, D.P, Zhang, K, Chiu, W, Khosla, C. 登録日 2021-03-28 公開日 2021-11-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Mapping the catalytic conformations of an assembly-line polyketide synthase module. Science, 374, 2021
6HJ7	The NMR structure of NRADD death domain 分子名称: Death domain-containing membrane protein NRADD 著者 Nadezhdin, K.D, Mineev, K.S, Goncharuk, S.A, Arseniev, A.S. 登録日 2018-09-01 公開日 2019-05-08 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 NMR structure of a full-length single-pass membrane protein NRADD. Proteins, 87, 2019
7MDI	Structure of the Neisseria gonorrhoeae ribonucleotide reductase in the inactive state 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Levitz, T.S, Drennan, C.L, Brignole, E.J. 登録日 2021-04-05 公開日 2022-01-05 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Effects of chameleon dispense-to-plunge speed on particle concentration, complex formation, and final resolution: A case study using the Neisseria gonorrhoeae ribonucleotide reductase inactive complex. J.Struct.Biol., 214, 2021
7MF3	Structure of the autoinhibited state of smooth muscle myosin-2 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Myosin light polypeptide 6, ... 著者 Heissler, S.M, Arora, A.S, Billington, N, Sellers, J.R, Chinthalapudi, K. 登録日 2021-04-08 公開日 2022-01-05 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cryo-EM structure of the autoinhibited state of myosin-2. Sci Adv, 7, 2021
7MFZ	The Crystal Structure of Domain-Swapped Trimer Q108K:K40D:T53A:R58L:Q38F:Q4F Mutant of HCRBPII Bound with LizFluor3 Chromophore Showing Excited State Intermolecular Proton Transfer 分子名称: 1-(4-{5-[(2E)-but-2-en-2-yl]thiophen-2-yl}phenyl)azetidine, ACETATE ION, GLYCEROL, ... 著者 Ghanbarpour, A, Geiger, J. 登録日 2021-04-12 公開日 2022-01-12 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Design of Large Stokes Shift Fluorescent Proteins Based on Excited State Proton Transfer of an Engineered Photobase. J.Am.Chem.Soc., 143, 2021
6L7A	CsgFG complex in Curli biogenesis system 分子名称: CsgF, Curli production assembly/transport protein CsgG 著者 Yan, Z.F, Yin, M, Chen, J.N, Li, X.M. 登録日 2019-11-01 公開日 2020-01-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.38 Å) 主引用文献 Assembly and substrate recognition of curli biogenesis system. Nat Commun, 11, 2020
7MFX	The Crystal Structure of Q108K:K40H:T53A:R58L:Q38F:Q4F Mutant of HCRBPII Bound with FR1 Chromophore Showing Excited State Intermolecular Proton Transfer 分子名称: (4aP)-N,N-diethyl-9,9-dimethyl-7-[(1E)-prop-1-en-1-yl]-9H-fluoren-2-amine, GLYCEROL, Retinol-binding protein 2 著者 Ghanbarpour, A, Geiger, J. 登録日 2021-04-11 公開日 2022-01-12 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Design of Large Stokes Shift Fluorescent Proteins Based on Excited State Proton Transfer of an Engineered Photobase. J.Am.Chem.Soc., 143, 2021
7MWT	Structure of the E. coli PutA proline dehydrogenase domain (residues 86-630) complexed with 1,1-Cyclobutanedicarboxylate 分子名称: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ... 著者 Tanner, J.J, Bogner, A.N. 登録日 2021-05-17 公開日 2022-01-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Structure-affinity relationships of reversible proline analog inhibitors targeting proline dehydrogenase. Org.Biomol.Chem., 20, 2022
6KQE	Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 4 nt 分子名称: DNA (5'-D(*CP*CP*T*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G*)-3'), DNA-directed RNA polymerase subunit alpha, ... 著者 Zhang, Y, Li, L, Ebright, R.H. 登録日 2019-08-17 公開日 2020-03-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription. Proc.Natl.Acad.Sci.USA, 117, 2020
7MFY	The Crystal Structure of Q108K:K40L:T51V:T53S:R58W:Y19W:A33W:L117E Mutant of HCRBPII Bound with LizFluor 分子名称: 4-{5-[(2E)-but-2-en-2-yl]thiophen-2-yl}-N,N-dimethylaniline, ACETATE ION, GLYCEROL, ... 著者 Ghanbarpour, A, Geiger, J. 登録日 2021-04-12 公開日 2022-01-12 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 Design of Large Stokes Shift Fluorescent Proteins Based on Excited State Proton Transfer of an Engineered Photobase. J.Am.Chem.Soc., 143, 2021

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