PDB: 55698 件ウェブページステータス検索Chemie searchBIRD

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1EFL	HUMAN MALIC ENZYME IN A QUATERNARY COMPLEX WITH NAD, MG, AND TARTRONATE 分子名称: MAGNESIUM ION, MALIC ENZYME, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Yang, Z, Floyd, D.L, Loeber, G, Tong, L. 登録日 2000-02-09 公開日 2000-03-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of a closed form of human malic enzyme and implications for catalytic mechanism. Nat.Struct.Biol., 7, 2000
1EFK	STRUCTURE OF HUMAN MALIC ENZYME IN COMPLEX WITH KETOMALONATE 分子名称: ALPHA-KETOMALONIC ACID, MAGNESIUM ION, MALIC ENZYME, ... 著者 Yang, Z, Floyd, D.L, Loeber, G, Tong, L. 登録日 2000-02-09 公開日 2000-03-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of a closed form of human malic enzyme and implications for catalytic mechanism. Nat.Struct.Biol., 7, 2000
6O6C	RNA polymerase II elongation complex arrested at a CPD lesion 分子名称: DNA (27-MER), DNA (5'-D(P*GP*GP*AP*GP*AP*AP*GP*GP*AP*GP*CP*AP*GP*AP*GP*C)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Lahiri, I, Leshziner, A.E. 登録日 2019-03-05 公開日 2019-06-26 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 3.1 angstrom structure of yeast RNA polymerase II elongation complex stalled at a cyclobutane pyrimidine dimer lesion solved using streptavidin affinity grids. J.Struct.Biol., 207, 2019
3IV9	Structure of the B12-dependent Methionine Synthase (MetH) C-teminal half in a "His-On" conformation 分子名称: COBALAMIN, Methionine synthase 著者 Pattridge, K.A, Koutmos, M, Smith, J.L. 登録日 2009-08-31 公開日 2009-11-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Insights into the reactivation of cobalamin-dependent methionine synthase. Proc.Natl.Acad.Sci.USA, 106, 2009
1NHP	CRYSTALLOGRAPHIC ANALYSES OF NADH PEROXIDASE CYS42ALA AND CYS42SER MUTANTS: ACTIVE SITE STRUCTURE, MECHANISTIC IMPLICATIONS, AND AN UNUSUAL ENVIRONMENT OF ARG303 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADH PEROXIDASE, SULFATE ION 著者 Mande, S.S, Claiborne, A, Hol, W.G.J. 登録日 1994-12-09 公開日 1995-02-14 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystallographic analyses of NADH peroxidase Cys42Ala and Cys42Ser mutants: active site structures, mechanistic implications, and an unusual environment of Arg 303. Biochemistry, 34, 1995
4HQI	Structure of O6-Benzyl-2'-deoxyguanosine opposite perimidinone-derived synthetic nucleoside in DNA duplex 分子名称: SPERMINE, STRONTIUM ION, Short modified nucleic acids 著者 Kowal, E.A, Lad, R, Pallan, P.S, Muffly, E, Wawrzak, Z, Egli, M, Sturla, S.J, Stone, M.P. 登録日 2012-10-25 公開日 2013-07-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Recognition of O6-benzyl-2'-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction. Nucleic Acids Res., 41, 2013
4HKG	Crystal Structure of Free-Standing Peptidyl Carrier Protein from Uncharacterized Acinetobacter baumannii Secondary Metabolic Pathway 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ... 著者 Allen, C.L, Gulick, A.M. 登録日 2012-10-15 公開日 2013-10-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.3002 Å) 主引用文献 Structural and bioinformatic characterization of an Acinetobacter baumannii type II carrier protein. Acta Crystallogr. D Biol. Crystallogr., 70, 2014
7N4Y	The structure of bovine thyroglobulin with iodinated tyrosines 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Kim, K, Clarke, O.B. 登録日 2021-06-04 公開日 2021-11-10 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.61 Å) 主引用文献 The structure of natively iodinated bovine thyroglobulin. Acta Crystallogr D Struct Biol, 77, 2021
7PHK	Human voltage-gated potassium channel Kv3.1 in dimeric state (with Zn) 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, POTASSIUM ION, Potassium voltage-gated channel, ... 著者 Chi, G, Qian, P, Castro-Hartmann, P, Venkaya, S, Singh, N.K, McKinley, G, Mukhopadhyay, S.M.M, Marsden, B, MacLean, E.M, Fernandez-Cid, A, Pike, A.C.W, Sader, K, Burgess-Brown, N.A, Duerr, K.L. 登録日 2021-08-17 公開日 2022-03-02 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Cryo-EM structure of the human Kv3.1 channel reveals gating control by the cytoplasmic T1 domain. Nat Commun, 13, 2022
3E2Q	Crystal Structure Reduced PutA86-630 Mutant Y540S Complexed with trans-4-hydroxy-L-proline 分子名称: 4-HYDROXYPROLINE, FLAVIN-ADENINE DINUCLEOTIDE, PENTAETHYLENE GLYCOL, ... 著者 Tanner, J.J. 登録日 2008-08-06 公開日 2009-02-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A conserved active site tyrosine residue of proline dehydrogenase helps enforce the preference for proline over hydroxyproline as the substrate. Biochemistry, 48, 2009
6ZVY	X-RAY STRUCTURE OF THE HALOALKANE DEHALOGENASE HALOTAG7-Q165H-P174R LABELED WITH A CHLOROALKANE-TETRAMETHYLRHODAMINE FLUOROPHORE SUBSTRATE 分子名称: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ... 著者 Tarnawski, M, Frei, M, Hiblot, J, Johnsson, K. 登録日 2020-07-27 公開日 2021-08-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Engineered HaloTag variants for fluorescence lifetime multiplexing. Nat.Methods, 19, 2022
3NWM	Crystal structure of a single chain construct composed of MHC class I H-2Kd, beta-2microglobulin and a peptide which is an autoantigen for type 1 diabetes 分子名称: Peptide/beta-2microglobulin/MHC class I H-2Kd chimeric protein 著者 Ramagopal, U.A, Samanta, D, Nathenson, S.G, Almo, S.C. 登録日 2010-07-09 公開日 2011-07-06 最終更新日 2017-06-28 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural and functional characterization of a single-chain peptide-MHC molecule that modulates both naive and activated CD8+ T cells. Proc.Natl.Acad.Sci.USA, 108, 2011
7NCZ	Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with hexa-mannuronic acid 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alginate lyase (PL7), beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid 著者 Fredslund, F, Welner, D.H, Wilkens, C. 登録日 2021-01-29 公開日 2022-03-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with hexa-mannuronic acid To Be Published
7NM6	Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with di-mannuronic acid 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alginate lyase (PL7), beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid 著者 Fredslund, F, Welner, D.H, Wilkens, C. 登録日 2021-02-23 公開日 2022-03-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with di-mannuronic acid To Be Published
7PYG	Structure of LPMO in complex with cellotetraose at 3.6x10^5 Gy 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ... 著者 Tandrup, T, Lo Leggio, L. 登録日 2021-10-10 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. Iucrj, 9, 2022
7PYH	Structure of LPMO in complex with cellotetraose at 1.45x10^6 Gy 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ... 著者 Tandrup, T, Lo Leggio, L. 登録日 2021-10-10 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. Iucrj, 9, 2022
7PYF	Structure of LPMO in complex with cellotetraose at 1.39x10^5 Gy 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ... 著者 Tandrup, T, Lo Leggio, L. 登録日 2021-10-10 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. Iucrj, 9, 2022
7NPP	Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with penta-mannuronic acid 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alginate lyase (PL7), beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid 著者 Fredslund, F, Welner, D.W, Wilkens, C. 登録日 2021-02-28 公開日 2022-03-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with penta-mannuronic acid To Be Published
7PYE	Structure of LPMO in complex with cellotetraose at 5.99x10^4 Gy 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ... 著者 Tandrup, T, Lo Leggio, L. 登録日 2021-10-10 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. Iucrj, 9, 2022
7PYD	Structure of LPMO in complex with cellotetraose at 7.88x10^3 Gy 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ... 著者 Tandrup, T, Lo Leggio, L. 登録日 2021-10-10 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. Iucrj, 9, 2022
7PYI	Structure of LPMO in complex with cellotetraose at 6.65x10^6 Gy 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ... 著者 Tandrup, T, Lo Leggio, L. 登録日 2021-10-10 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. Iucrj, 9, 2022
7AKQ	Structure of D169A/E171A double mutant of chitinase Chit42 from Trichoderma harzianum complexed with chitintetraose obtained by soaking. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... 著者 Jimenez-Ortega, E, Sanz-Aparicio, J. 登録日 2020-10-01 公開日 2021-10-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 Structural inspection and protein motions modelling of a fungal glycoside hydrolase family 18 chitinase by crystallography depicts a dynamic enzymatic mechanism Comput Struct Biotechnol J, 19, 2021
1FFO	CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH SYNTHETIC PEPTIDE GP33 (C9M/K1A) 分子名称: BETA-2 MICROGLOBULIN BETA CHAIN, H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B, ... 著者 Wang, B, Sharma, A, Maile, R, Saad, M, Collins, E.J, Frelinger, J.A. 登録日 2000-07-25 公開日 2002-12-11 最終更新日 2017-02-01 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Peptidic termini play a significant role in TCR recognition. J.Immunol., 169, 2002
5TL4	Crystal structure of Sphingomonas paucimobilis aryl O-demethylase LigM 分子名称: AMMONIUM ION, CHLORIDE ION, GLYCEROL, ... 著者 Kohler, A.C, Adams, P.D, Simmons, B.A, Sale, K.L. 登録日 2016-10-10 公開日 2017-04-12 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.751 Å) 主引用文献 Structure of aryl O-demethylase offers molecular insight into a catalytic tyrosine-dependent mechanism. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3NXC	Molecular mechanism by which the Escherichia coli nucleoid occlusion factor, SlmA, keeps cytokinesis in check 分子名称: HTH-type protein slmA 著者 Tonthat, N.K, Schumacher, M.A. 登録日 2010-07-13 公開日 2011-02-23 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Molecular mechanism by which the nucleoid occlusion factor, SlmA, keeps cytokinesis in check. Embo J., 30, 2011

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