PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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3MNN	A Ruthenium Antitumour Agent Forms Specific Histone Protein Adducts in the Nucleosome Core 分子名称: 1,3,5-triaza-7-phosphatricyclo[3.3.1.1~3,7~]decane, 1-methyl-4-(1-methylethyl)benzene, DNA (145-MER), ... 著者 Ong, M.S, Davey, C.A. 登録日 2010-04-22 公開日 2011-04-06 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A ruthenium antimetastasis agent forms specific histone protein adducts in the nucleosome core Chemistry, 17, 2011
1DLO	HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 分子名称: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE 著者 Hsiou, Y, Ding, J, Das, K, Hughes, S, Arnold, E. 登録日 1996-04-17 公開日 1996-08-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of unliganded HIV-1 reverse transcriptase at 2.7 A resolution: implications of conformational changes for polymerization and inhibition mechanisms. Structure, 4, 1996
8UH4	Cryo-EM structure of Maize Streak Virus (MSV) - single head Geminivirus 分子名称: Capsid protein, genomic DNA 著者 Bennett, A.B, McKenna, R, Mietzsch, M, Hull, J.A. 登録日 2023-10-06 公開日 2023-11-22 実験手法 ELECTRON MICROSCOPY (3.72 Å) 主引用文献 The Two States of MSV Gemini Capsid Assembly To Be Published
8UGQ	CryoEM Structure of Maize Streak Virus (MSV) - Geminivirus 分子名称: Capsid protein, DNA (5'-D(P*CP*GP*AP*AP*CP*CP*CP*CP*A)-3') 著者 McKenna, R, Bennett, A.B, Mietzsch, M, Hull, J.A. 登録日 2023-10-05 公開日 2023-11-22 実験手法 ELECTRON MICROSCOPY (3.17 Å) 主引用文献 The two states of Maize Streak Virus (MSV) Geminivirus Architecture To Be Published
3DB4	Crystal structure of the tandem tudor domains of the E3 ubiquitin-protein ligase UHRF1 分子名称: E3 ubiquitin-protein ligase UHRF1, SULFATE ION 著者 Walker, J.R, Avvakumov, G.V, Xue, S, Dong, A, Li, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC) 登録日 2008-05-30 公開日 2008-09-16 最終更新日 2012-04-18 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Recognition of multivalent histone states associated with heterochromatin by UHRF1 protein. J.Biol.Chem., 286, 2011
6JQ4	HIGA Escherichia coli-K12 分子名称: Antitoxin HigA 著者 She, Z, Xu, B.S. 登録日 2019-03-28 公開日 2019-05-01 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Conformational changes of antitoxin HigA from Escherichia coli str. K-12 upon binding of its cognate toxin HigB reveal a new regulation mechanism in toxin-antitoxin systems. Biochem.Biophys.Res.Commun., 514, 2019
3F8T	Crystal structure analysis of a full-length MCM homolog from Methanopyrus kandleri 分子名称: Predicted ATPase involved in replication control, Cdc46/Mcm family 著者 Bae, B, Nair, S.K. 登録日 2008-11-13 公開日 2009-03-03 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Insights into the Architecture of the Replicative Helicase from the Structure of an Archaeal MCM Homolog. Structure, 17, 2009
1ASU	AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN CRYSTALLIZED FROM 2% PEG 400, 2M AMMONIUM SULFATE, HEPES PH 7.5 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AVIAN SARCOMA VIRUS INTEGRASE 著者 Bujacz, G, Jaskolski, M, Alexandratos, J, Wlodawer, A. 登録日 1995-08-25 公開日 1995-11-14 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 High-resolution structure of the catalytic domain of avian sarcoma virus integrase. J.Mol.Biol., 253, 1995
8QSJ	Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7 分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Ritter, C, Nguyen, T.G, Kummer, E. 登録日 2023-10-10 公開日 2023-12-13 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural insights into the role of GTPBP10 in the RNA maturation of the mitoribosome. Nat Commun, 14, 2023
8GLV	96-nm repeat unit of doublet microtubules from Chlamydomonas reinhardtii flagella 分子名称: 28 kDa inner dynein arm light chain, axonemal, AAA+ ATPase domain-containing protein, ... 著者 Walton, T, Brown, A. 登録日 2023-03-23 公開日 2023-05-31 最終更新日 2023-06-28 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Axonemal structures reveal mechanoregulatory and disease mechanisms. Nature, 618, 2023
4DAY	Crystal structure of the RMI core complex with MM2 peptide from FANCM 分子名称: Fanconi anemia group M protein, RecQ-mediated genome instability protein 1, RecQ-mediated genome instability protein 2 著者 Hoadley, K.A, Keck, J.L. 登録日 2012-01-13 公開日 2012-03-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Defining the molecular interface that connects the Fanconi anemia protein FANCM to the Bloom syndrome dissolvasome. Proc.Natl.Acad.Sci.USA, 109, 2012
8DEY	Ternary complex structure of Cereblon-DDB1 bound to IKZF2(ZF2,3) and the molecular glue DKY709 分子名称: (3S)-3-[5-(1-benzylpiperidin-4-yl)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione, DNA damage-binding protein 1, Protein cereblon, ... 著者 Ma, X, Ornelas, E, Clifton, M.C. 登録日 2022-06-21 公開日 2023-03-08 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Discovery and characterization of a selective IKZF2 glue degrader for cancer immunotherapy. Cell Chem Biol, 30, 2023
3ZVN	The structural basis for substrate recognition by mammalian polynucleotide kinase 3' phosphatase 分子名称: 5'-D(*GP*TP*CP*AP*CP)-3', ADENOSINE-5'-DIPHOSPHATE, BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE, ... 著者 Garces, F, Pearl, L.H, Oliver, A.W. 登録日 2011-07-25 公開日 2011-11-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 The structural basis for substrate recognition by mammalian polynucleotide kinase 3' phosphatase. Mol. Cell, 44, 2011
7OF7	Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1). 分子名称: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Hillen, H.S, Lavdovskaia, E, Nadler, F, Hanitsch, E, Linden, A, Bohnsack, K.E, Urlaub, H, Richter-Dennerlein, R. 登録日 2021-05-04 公開日 2021-06-23 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling. Nat Commun, 12, 2021
7ODT	State C of the human mitoribosomal large subunit assembly intermediate 分子名称: 16S mitochondrial rRNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Lenarcic, T, Jaskolowski, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Saurer, M, Lee, R.G, Rackham, O, Filipovska, A, Ban, N. 登録日 2021-04-30 公開日 2021-06-23 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Stepwise maturation of the peptidyl transferase region of human mitoribosomes. Nat Commun, 12, 2021
8OO4	X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 1 month soaking 分子名称: AMMONIA, Angiogenin, PLATINUM (II) ION 著者 Ferraro, G, Merlino, A. 登録日 2023-04-04 公開日 2023-07-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Cisplatin binding to angiogenin protein: new molecular pathways and targets for the drug's anticancer activity. Dalton Trans, 52, 2023
7OIC	Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4 分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Cheng, J, Berninghausen, O, Beckmann, R. 登録日 2021-05-11 公開日 2021-09-15 最終更新日 2021-10-13 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 A distinct assembly pathway of the human 39S late pre-mitoribosome. Nat Commun, 12, 2021
7OF3	Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2). 分子名称: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Hillen, H.S, Lavdovskaia, E, Nadler, F, Hanitsch, E, Linden, A, Bohnsack, K.E, Urlaub, H, Richter-Dennerlein, R. 登録日 2021-05-04 公開日 2021-05-19 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling. Nat Commun, 12, 2021
7BED	X-ray structure of WDR5 bound to the WDR5 win motif peptide 分子名称: SULFATE ION, WD repeat-containing protein 5 著者 McVey, C.E, Kaye, K.M. 登録日 2020-12-23 公開日 2021-12-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 MLL1 is regulated by KSHV LANA and is important for virus latency. Nucleic Acids Res., 49, 2021
7BCY	X-ray structure of WDR5delta24 bound to the Kaposi's sarcoma herpesvirus LANA win motif peptide 分子名称: ORF 73, WD repeat-containing protein 5 著者 McVey, C.E, Kaye, K.M. 登録日 2020-12-21 公開日 2021-12-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 MLL1 is regulated by KSHV LANA and is important for virus latency. Nucleic Acids Res., 49, 2021
5GOW	Solution structure of the complex between DP1 acidic region and TFIIH p62 PH domain 分子名称: DP1, General transcription factor IIH subunit 1 著者 Okuda, M, Nishimura, Y. 登録日 2016-07-29 公開日 2016-12-07 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The Interaction Mode of the Acidic Region of the Cell Cycle Transcription Factor DP1 with TFIIH J. Mol. Biol., 428, 2016
8IPP	Crystal structure of the complex between an ankyrin and a parallel G-quadruplex 分子名称: 93del-T12, DARPin protein 2E4, MAGNESIUM ION, ... 著者 Ngo, K.H, Liew, C.W, Heddi, B, Phan, A.T. 登録日 2023-03-14 公開日 2024-07-31 実験手法 X-RAY DIFFRACTION (2.007 Å) 主引用文献 Structural Basis for Parallel G-Quadruplex Recognition by an Ankyrin Protein. J.Am.Chem.Soc., 146, 2024
3ZVM	The structural basis for substrate recognition by mammalian polynucleotide kinase 3' phosphatase 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-D(*GP*TP*CP*AP*CP)-3', ACETATE ION, ... 著者 Garces, F, Pearl, L.H, Oliver, A.W. 登録日 2011-07-25 公開日 2011-11-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.997 Å) 主引用文献 The structural basis for substrate recognition by mammalian polynucleotide kinase 3' phosphatase. Mol. Cell, 44, 2011
3T22	Crystal structure of OxyR mutant from Porphyromonas gingivalis 分子名称: Redox-sensitive transcriptional activator OxyR 著者 Svintradze, D.V, Wright, H.T, Lewis, J.P. 登録日 2011-07-22 公開日 2013-04-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structures of the Porphyromonas gingivalis OxyR regulatory domain explain differences in expression of the OxyR regulon in Escherichia coli and P. gingivalis. Acta Crystallogr.,Sect.D, 69, 2013
6UGL	VqmA bound to DPO 分子名称: 3,5-dimethylpyrazin-2(1H)-one, Helix-turn-helix transcriptional regulator 著者 Paczkowski, J.E, Huang, X. 登録日 2019-09-26 公開日 2020-01-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Mechanism underlying autoinducer recognition in theVibrio choleraeDPO-VqmA quorum-sensing pathway. J.Biol.Chem., 295, 2020

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