PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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8VMS	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 80s 分子名称: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... 著者 Chang, C, Gao, Y. 登録日 2024-01-13 公開日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
7NET	Crystal structure of the v-Src SH3 domain W95R-I96T mutant 分子名称: DI(HYDROXYETHYL)ETHER, SULFATE ION, TRIETHYLENE GLYCOL, ... 著者 Camara-Artigas, A, Salinas-Garcia, M.C. 登録日 2021-02-04 公開日 2021-06-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The impact of oncogenic mutations of the viral Src kinase on the structure and stability of the SH3 domain. Acta Crystallogr D Struct Biol, 77, 2021
8X6G	Cryo-EM structure of Staphylococcus aureus sigB-dependent RNAP-promoter open complex 分子名称: DNA (70-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Yuan, L, Xu, L, Liu, Q, Feng, Y. 登録日 2023-11-21 公開日 2024-06-05 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis of promoter recognition by Staphylococcus aureus RNA polymerase. Nat Commun, 15, 2024
8WGH	Cryo-EM structure of the red-shifted Fittonia albivenis PSI-LHCI 分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... 著者 Huang, G.Q, Li, X.X, Sui, S.F, Qin, X.C. 登録日 2023-09-21 公開日 2024-07-10 最終更新日 2024-08-07 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Structure of the red-shifted Fittonia albivenis photosystem I. Nat Commun, 15, 2024
9BJU	Crystal structure of the complex between VHL, ElonginB, ElonginC, and compound 5 分子名称: 1,2-ETHANEDIOL, 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, ACETATE ION, ... 著者 Murray, J.M, Wu, H, Fuhrmann, J, Fairbrother, W.J, DiPasquale, A. 登録日 2024-04-25 公開日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Potency-enhanced peptidomimetic VHL ligands with improved oral bioavailability To Be Published
9FVT	Crystal structure of marine sulfatase (OpSulf1) from Ochrovirga pacifica 分子名称: MAGNESIUM ION, Sulfatase 著者 Solanki, V.A, Krull, J, Hehemann, J.H. 登録日 2024-06-28 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Crystal structure of marine sulfatase (OpSulf1) from Ochrovirga pacifica To Be Published
8VN3	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 600s 分子名称: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, ... 著者 Chang, C, Gao, Y. 登録日 2024-01-13 公開日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8WR0	Fe-O nanocluster of form-XII in the 4-fold channel of Ureaplasma diversum ferritin 分子名称: FE (III) ION, ferritin 著者 Wang, W.M, Ma, D.Y, Gong, W.J, Wu, L.J, Wang, H.F. 登録日 2023-10-12 公開日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages. J.Am.Chem.Soc., 146, 2024
8VND	Homing endonuclease I-PpoI-DNA complex:reaction at pH8.0 (Tris) with 500 uM Mg2+ for 600s 分子名称: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, ... 著者 Chang, C, Gao, Y. 登録日 2024-01-13 公開日 2024-07-10 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8WST	Cryo-EM structure of Melanin-Concentrating Hormone Receptor 2 with MCH 分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(q) subunit alpha-1, ... 著者 Zhao, L, He, Q, Yuan, Q, Gu, Y, Shan, H, Hu, W, Wu, K, Xu, H.E, Zhang, Y, Wu, C. 登録日 2023-10-17 公開日 2024-06-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Mechanisms of ligand recognition and activation of melanin-concentrating hormone receptors. Cell Discov, 10, 2024
7NES	Crystal structure of the v-Src SH3 domain N117D-V124L mutant 分子名称: GLYCINE, v-Src SH3 domain 著者 Camara-Artigas, A, Salinas-Garcia, M.C. 登録日 2021-02-04 公開日 2021-06-02 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 The impact of oncogenic mutations of the viral Src kinase on the structure and stability of the SH3 domain. Acta Crystallogr D Struct Biol, 77, 2021
8VNM	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 320s 分子名称: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... 著者 Chang, C, Gao, Y. 登録日 2024-01-13 公開日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8W7T	Fe-O nanocluster of form-VII in the 4-fold channel of Ureaplasma diversum ferritin 分子名称: CHLORIDE ION, FE (III) ION, Ferritin, ... 著者 Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F. 登録日 2023-08-31 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (2.499 Å) 主引用文献 Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages. J.Am.Chem.Soc., 146, 2024
8XBT	The cryo-EM structure of the octameric RAD51 ring bound to the nucleosome with the linker DNA binding 分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ... 著者 Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H. 登録日 2023-12-07 公開日 2024-03-27 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.12 Å) 主引用文献 Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site. Nature, 628, 2024
8XW4	Cryo-EM structure of TMEM63B-Digitonin state 分子名称: CSC1-like protein 2 著者 Zhang, Y, Han, Y. 登録日 2024-01-15 公開日 2024-04-10 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.84 Å) 主引用文献 Mechanical activation opens a lipid-lined pore in OSCA ion channels. Nature, 628, 2024
9BUN	RhoBAST aptamer RNA in complex with 5(6)-carboxytetramethylrhodamine 分子名称: 5-carboxy methylrhodamine, IRIDIUM HEXAMMINE ION, RNA (48-MER) 著者 Batey, R.T, Siwik, S.H. 登録日 2024-05-17 公開日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of RhoBAST RNA aptamer in complex with 5(6)-carboxytetramethylrhodamine (TAMRA) To Be Published
8VVM	Structure of FabS1CE1-EPR1-1 in complex with the erythropoietin receptor 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S. 登録日 2024-01-31 公開日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones. Protein Sci., 33, 2024
9F3E	Single acyclic phosphonate nucleotide (R)-ZNA modification on DNA duplex 分子名称: C modified (R)-ZNA 著者 Li, X, Groaz, E, Herdewyn, P, Lescrinier, E. 登録日 2024-04-25 公開日 2024-06-05 最終更新日 2024-07-10 実験手法 SOLUTION NMR 主引用文献 Impact of Single Acyclic Phosphonate Nucleotide (ZNA) Modifications on DNA Duplex Stability. Chemistry, 30, 2024
8WXV	Structure of WDR5 in complex with WIN motif containing SET1B 分子名称: SET1B, WD repeat-containing protein 5 著者 Xu, L, Yang, Y. 登録日 2023-10-30 公開日 2024-06-26 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural studies of WDR5 in complex with MBD3C WIN motif reveal a unique binding mode. J.Biol.Chem., 300, 2024
8XPM	Mature virion portal of phage lambda with DNA 分子名称: DNA (104-MER), DNA (92-MER), Head completion protein, ... 著者 Wang, J.W, Gu, Z.W. 登録日 2024-01-04 公開日 2024-04-10 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural morphing in the viral portal vertex of bacteriophage lambda. J.Virol., 98, 2024
8WCP	Cryo-EM structure of human disease-associated P301L Tau amyloid fibril from mouse brain 分子名称: Island A, Island B, P301L Tau amyloid fibril from rTg4510 mice 著者 Liu, K.E, Zhao, W.B, Liu, C. 登録日 2023-09-13 公開日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 Cryo-EM structures reveal variant Tau amyloid fibrils between the rTg4510 mouse model and sporadic human tauopathies. Cell Discov, 10, 2024
8VT5	Crystal structure of human menRNA 分子名称: menRNA 著者 Skeparnias, I, Zhang, J. 登録日 2024-01-25 公開日 2024-07-24 最終更新日 2024-07-31 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Structural basis of NEAT1 lncRNA maturation and menRNA instability. Nat.Struct.Mol.Biol., 2024
8WWW	Crystal structure of the adenylation domain of SyAstC 分子名称: Carrier domain-containing protein, DIMETHYL SULFOXIDE, GLYCEROL, ... 著者 Li, Z, Zhu, Z, Zhu, D, Shen, Y. 登録日 2023-10-27 公開日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 Functional Application of the Single-Module NRPS-like d-Alanyltransferase in Maytansinol Biosynthesis Acs Catalysis, 14, 2024
8X6F	Cryo-EM structure of Staphylococcus aureus sigA-dependent RNAP-promoter open complex 分子名称: DNA (71-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Yuan, L, Xu, L, Liu, Q, Feng, Y. 登録日 2023-11-21 公開日 2024-06-05 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural basis of promoter recognition by Staphylococcus aureus RNA polymerase. Nat Commun, 15, 2024
8YJ6	Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA 分子名称: Iron ABC transporter substrate-binding lipoprotein MtsA, ZINC ION 著者 Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K. 登録日 2024-03-01 公開日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA. Protein Sci., 33, 2024

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