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3BA0
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Crystal structure of full-length human MMP-12
分子名称: ACETOHYDROXAMIC ACID, CALCIUM ION, Macrophage metalloelastase, ...
著者Bertini, I, Calderone, V, Fragai, M, Jaiswal, R, Luchinat, C, Melikian, M, Myonas, E, Svergun, D.I.
登録日2007-11-07
公開日2008-07-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Evidence of reciprocal reorientation of the catalytic and hemopexin-like domains of full-length MMP-12.
J.Am.Chem.Soc., 130, 2008
3AVE
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BU of 3ave by Molmil
Crystal Structure of the Fucosylated Fc Fragment from Human Immunoglobulin G1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region, ZINC ION
著者Matsumiya, S, Yamaguchi, Y, Saito, J, Nagano, M, Sasakawa, H, Otaki, S, Satoh, M, Shitara, K, Kato, K.
登録日2011-03-04
公開日2011-04-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Corrigendum to "Structural Comparison of Fucosylated and Nonfucosylated Fc Fragments of Human Immunoglobulin G1" [J. Mol. Biol. 386/3 (2007) 767-779]
J.Mol.Biol., 408, 2011
3BQE
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BU of 3bqe by Molmil
Structure of the central domain (MsrA) of Neisseria meningitidis PilB (reduced form)
分子名称: Peptide methionine sulfoxide reductase msrA/msrB
著者Ranaivoson, F.M, Kauffmann, B, Favier, F.
登録日2007-12-20
公開日2008-02-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural analysis of the catalytic mechanism of methionine sulfoxide reductase A from Neisseria meningitidis
J.Mol.Biol., 377, 2008
3BP2
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BU of 3bp2 by Molmil
ROLE OF THE N-TERMINUS IN THE INTERACTION OF PANCREATIC PHOSPHOLIPASE A2 WITH AGGREGATED SUBSTRATES. PROPERTIES AND CRYSTAL STRUCTURE OF TRANSAMINATED PHOSPHOLIPASE A2
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Dijkstra, B.W, Drenth, J.
登録日1983-06-27
公開日1983-09-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Role of the N-terminus in the interaction of pancreatic phospholipase A2 with aggregated substrates. Properties and crystal structure of transaminated phospholipase A2
Biochemistry, 23, 1984
3B32
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BU of 3b32 by Molmil
Crystal Structure of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75
分子名称: CALCIUM ION, Calmodulin
著者Newman, R.A, Shea, M.A.
登録日2007-10-19
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Thermodynamics and conformational change governing domain-domain interactions of calmodulin.
Methods Enzymol., 466, 2009
3B42
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BU of 3b42 by Molmil
Periplasmic sensor domain of chemotaxis protein GSU0935
分子名称: Methyl-accepting chemotaxis protein, putative, PROTOPORPHYRIN IX CONTAINING FE
著者Pokkuluri, P.R, Schiffer, M.
登録日2007-10-23
公開日2008-04-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures and solution properties of two novel periplasmic sensor domains with c-type heme from chemotaxis proteins of Geobacter sulfurreducens: implications for signal transduction.
J.Mol.Biol., 377, 2008
3BVB
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BU of 3bvb by Molmil
Cystal structure of HIV-1 Active Site Mutant D25N and inhibitor Darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, GLYCEROL, ...
著者Liu, F, Weber, I.T.
登録日2008-01-05
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Effect of the Active Site D25N Mutation on the Structure, Stability, and Ligand Binding of the Mature HIV-1 Protease.
J.Biol.Chem., 283, 2008
3BYR
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BU of 3byr by Molmil
Mode of Action of a Putative Zinc Transporter CzrB (Zn form)
分子名称: CzrB protein, ZINC ION
著者Cherezov, V, Srinivasan, V, Szebenyi, D.M.E, Caffrey, M.
登録日2008-01-16
公開日2008-09-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Insights into the Mode of Action of a Putative Zinc Transporter CzrB in Thermus thermophilus
Structure, 16, 2008
3BQH
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BU of 3bqh by Molmil
Structure of the central domain (MsrA) of Neisseria meningitidis PilB (oxidized form)
分子名称: ACETATE ION, Peptide methionine sulfoxide reductase msrA/msrB
著者Ranaivoson, F.M, Kauffmann, B, Favier, F.
登録日2007-12-20
公開日2008-02-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A structural analysis of the catalytic mechanism of methionine sulfoxide reductase A from Neisseria meningitidis
J.Mol.Biol., 377, 2008
3BYP
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BU of 3byp by Molmil
Mode of Action of a Putative Zinc Transporter CzrB
分子名称: CzrB protein, SULFATE ION
著者Cherezov, V, Srinivasan, V, Szebenyi, D.M.E, Caffrey, M.
登録日2008-01-16
公開日2008-09-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Insights into the Mode of Action of a Putative Zinc Transporter CzrB in Thermus thermophilus
Structure, 16, 2008
2YKM
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BU of 2ykm by Molmil
Crystal structure of HIV-1 Reverse Transcriptase (RT) in complex with a Difluoromethylbenzoxazole (DFMB) Pyrimidine Thioether derivative, a non-nucleoside RT inhibitor (NNRTI)
分子名称: 2-[DIFLUORO-[(4-METHYL-PYRIMIDINYL)-THIO]METHYL]-BENZOXAZOLE, CALCIUM ION, REVERSE TRANSCRIPTASE/RIBONUCLEASE H
著者Boyer, J, Arnoult, E, Medebielle, M, Guillemont, J, Unge, T, Unge, J, Jochmans, D.
登録日2011-05-28
公開日2011-08-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Difluoromethylbenzoxazole Pyrimidine Thioether Derivatives: A Novel Class of Potent Non-Nucleoside HIV-1 Reverse Transcriptase Inhibitors.
J.Med.Chem., 54, 2011
2YPY
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BU of 2ypy by Molmil
KSHV LANA (ORF73) C-terminal domain, decameric ring: monoclinic crystal form
分子名称: CHLORIDE ION, ORF 73
著者Hellert, J, Krausze, J, Luhrs, T.
登録日2012-11-02
公開日2013-11-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.453 Å)
主引用文献A Structural Basis for Brd2/4-Mediated Host Chromatin Interaction and Oligomer Assembly of Kaposi Sarcoma-Associated Herpesvirus and Murine Gammaherpesvirus Lana Proteins.
Plos Pathog., 9, 2013
2Z1O
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BU of 2z1o by Molmil
Crystal structure of a photoswitchable GFP-like protein Dronpa in the bright-state
分子名称: Fluorescent protein Dronpa
著者Kikuchi, A, Jeyakanthan, J, Taka, J, Shiro, Y, Mizuno, H, Miyawaki, A.
登録日2007-05-10
公開日2008-05-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Light-dependent regulation of structural flexibility in a photochromic fluorescent protein
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BVA
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BU of 3bva by Molmil
Cystal structure of HIV-1 Active Site Mutant D25N and p2-NC analog inhibitor
分子名称: GLYCEROL, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, Protease (Retropepsin)
著者Liu, F, Weber, I.T.
登録日2008-01-05
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Effect of the Active Site D25N Mutation on the Structure, Stability, and Ligand Binding of the Mature HIV-1 Protease.
J.Biol.Chem., 283, 2008
3BOD
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BU of 3bod by Molmil
Structure of mouse beta-neurexin 1
分子名称: CALCIUM ION, Neurexin-1-alpha
著者Koehnke, J, Jin, X, Shapiro, L.
登録日2007-12-17
公開日2008-03-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structures of beta-Neurexin 1 and beta-Neurexin 2 Ectodomains and Dynamics of Splice Insertion Sequence 4.
Structure, 16, 2008
3BOP
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BU of 3bop by Molmil
Structure of mouse beta-neurexin 2D4
分子名称: beta-Neurexin 2D4
著者Koehnke, J, Jin, X, Shapiro, L.
登録日2007-12-17
公開日2008-03-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structures of beta-Neurexin 1 and beta-Neurexin 2 Ectodomains and Dynamics of Splice Insertion Sequence 4.
Structure, 16, 2008
3A8R
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BU of 3a8r by Molmil
The structure of the N-terminal regulatory domain of a plant NADPH oxidase
分子名称: CALCIUM ION, Putative uncharacterized protein
著者Oda, T, Hashimoto, H, Kuwabara, N, Akashi, S, Hayashi, K, Kojima, C, Wong, H.L, Kawasaki, T, Shimamoto, K, Sato, M, Shimizu, T.
登録日2009-10-07
公開日2009-10-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of the N-terminal regulatory domain of a plant NADPH oxidase and its functional implications
J.Biol.Chem., 285, 2010
3AKM
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BU of 3akm by Molmil
X-ray structure of iFABP from human and rat with bound fluorescent fatty acid analogue
分子名称: 11-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)undecanoic acid, Fatty acid-binding protein, intestinal, ...
著者Wielens, J, Laguerre, A.J.K, Parker, M.W, Scanlon, M.J.
登録日2010-07-14
公開日2011-07-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of human and rat intestinal fatty acid binding proteins in complex with 11-(Dansylamino)undecanoic acid
To be Published
3C4S
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BU of 3c4s by Molmil
Crystal structure of the Ssl0352 protein from Synechocystis sp. Northeast Structural Genomics Consortium target SgR42
分子名称: Ssl0352 protein
著者Vorobiev, S.M, Chen, Y, Seetharaman, J, Wang, D, Maglaqui, M, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2008-01-30
公開日2008-02-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the Ssl0352 protein from Synechocystis sp.
To be Published
3BQG
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BU of 3bqg by Molmil
Structure of the central domain (MsrA) of Neisseria meningitidis PilB (sulfenic acid form)
分子名称: Peptide methionine sulfoxide reductase msrA/msrB
著者Ranaivoson, F.M, Kauffmann, B, Favier, F.
登録日2007-12-20
公開日2008-02-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural analysis of the catalytic mechanism of methionine sulfoxide reductase A from Neisseria meningitidis
J.Mol.Biol., 377, 2008
3BW6
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BU of 3bw6 by Molmil
Crystal structure of the longin domain of yeast Ykt6
分子名称: SULFATE ION, Synaptobrevin homolog YKT6
著者Pylypenko, O, Schonichen, A, Ludwig, D, Ungermann, C, Goody, R.S, Rak, A, Geyer, M.
登録日2008-01-08
公開日2008-04-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Farnesylation of the SNARE protein Ykt6 increases its stability and helical folding.
J.Mol.Biol., 377, 2008
2Z6Y
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BU of 2z6y by Molmil
Crystal structure of a photoswitchable GFP-like protein Dronpa in the bright-state
分子名称: Fluorescent protein Dronpa
著者Kikuchi, A, Jeyakanthan, J, Taka, J, Shiro, Y, Mizuno, H, Miyawaki, A.
登録日2007-08-09
公開日2008-07-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Light-dependent regulation of structural flexibility in a photochromic fluorescent protein.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2Z5V
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BU of 2z5v by Molmil
Solution structure of the TIR domain of human MyD88
分子名称: Myeloid differentiation primary response protein MyD88
著者Ohnishi, H, Tochio, H, Hiroaki, H, Kondo, N, Kato, Z, Shirakawa, M.
登録日2007-07-19
公開日2008-08-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis for the multiple interactions of the MyD88 TIR domain in TLR4 signaling.
Proc.Natl.Acad.Sci.USA, 2009
3BQF
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BU of 3bqf by Molmil
Structure of the central domain (MsrA) of Neisseria meningitidis PilB (complex with a substrate)
分子名称: (2S)-2-(acetylamino)-N-methyl-4-[(S)-methylsulfinyl]butanamide, Peptide methionine sulfoxide reductase msrA/msrB
著者Ranaivoson, F.M, Kauffmann, B, Favier, F.
登録日2007-12-20
公開日2008-02-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献A structural analysis of the catalytic mechanism of methionine sulfoxide reductase A from Neisseria meningitidis
J.Mol.Biol., 377, 2008
3BRI
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BU of 3bri by Molmil
Crystal Structure of apo-LC8
分子名称: ACETATE ION, Dynein light chain 1, cytoplasmic, ...
著者Benison, G, Karplus, P.A, Barbar, E, Chiodo, M.
登録日2007-12-21
公開日2008-12-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Interplay of Ligand Binding and Quaternary Structure in the Diverse Interactions of Dynein Light Chain LC8.
J.Mol.Biol., 384, 2008

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