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8GHE
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BU of 8ghe by Molmil
The structure of h12-LOX in tetrameric form bound to endogenous inhibitor oleoyl-CoA
分子名称: FE (II) ION, Polyunsaturated fatty acid lipoxygenase ALOX12, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name)
著者Black, K.A, Mobbs, J.I, Venugopal, H, Thal, D.M, Glukhova, A.
登録日2023-03-09
公開日2023-08-09
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (2.05 Å)
主引用文献Cryo-EM structures of human arachidonate 12S-lipoxygenase bound to endogenous and exogenous inhibitors.
Blood, 142, 2023
8GHB
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The structure of h12-LOX in monomeric form
分子名称: FE (II) ION, Polyunsaturated fatty acid lipoxygenase ALOX12
著者Black, K.A, Mobbs, J.I, Venugopal, H, Thal, D.M, Glukhova, A.
登録日2023-03-09
公開日2023-08-09
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Cryo-EM structures of human arachidonate 12S-lipoxygenase bound to endogenous and exogenous inhibitors.
Blood, 142, 2023
1FAD
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DEATH DOMAIN OF FAS-ASSOCIATED DEATH DOMAIN PROTEIN, RESIDUES 89-183
分子名称: PROTEIN (FADD PROTEIN)
著者Jeong, E.-J, Bang, S, Lee, T.H, Park, Y.-I, Sim, W.-S, Kim, K.-S.
登録日1999-03-23
公開日1999-07-06
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献The solution structure of FADD death domain. Structural basis of death domain interactions of Fas and FADD.
J.Biol.Chem., 274, 1999
8GRJ
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BU of 8grj by Molmil
Crystal structure of gamma-alpha subunit complex from Burkholderia cepacia FAD glucose dehydrogenase in complex with gluconolactone
分子名称: D-glucono-1,5-lactone, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Yoshida, H, Kojima, K, Tsugawa, W, Okuda-Shimazaki, J, Kerrigan, J.A, Sode, K.
登録日2022-09-01
公開日2023-09-06
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structure of gamma-alpha subunit complex from Burkholderia cepacia FAD glucose dehydrogenase in complex with gluconolactone
To Be Published
6VCA
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BU of 6vca by Molmil
TB38 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-nucleotidase, ...
著者Zhou, Y.F, Lord, D.M.
登録日2019-12-20
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.73 Å)
主引用文献A highly potent CD73 biparatopic antibody blocks organization of the enzyme active site through dual mechanisms.
J.Biol.Chem., 295, 2020
3AFF
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BU of 3aff by Molmil
Crystal structure of the HsaA monooxygenase from M. tuberculosis
分子名称: Hydroxylase, putative
著者D'Angelo, I, Lin, L.Y, Dresen, C, Tocheva, E.I, Strynadka, N, Eltis, L.D.
登録日2010-02-28
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A flavin-dependent monooxygenase from Mycobacterium tuberculosis involved in cholesterol catabolism
J.Biol.Chem., 285, 2010
1FC7
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BU of 1fc7 by Molmil
PHOTOSYSTEM II D1 C-TERMINAL PROCESSING PROTEASE
分子名称: PHOTOSYSTEM II D1 PROTEASE
著者Liao, D.I, Qian, J, Chisholm, D.A, Jordan, D.B, Diner, B.A.
登録日2000-07-18
公開日2001-01-18
最終更新日2018-10-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the photosystem II D1 C-terminal processing protease.
Nat.Struct.Biol., 7, 2000
5C5U
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BU of 5c5u by Molmil
The crystal structure of viral collagen prolyl hydroxylase vCPH from Paramecium Bursaria Chlorella virus-1 - Truncated Construct
分子名称: ACETATE ION, MANGANESE (II) ION, Prolyl 4-hydroxylase, ...
著者Longbotham, J.E, Levy, C.W, Johannisen, L.O, Tarhonskaya, H, Jiang, S, Loenarz, C, Flashman, E, Hay, S, Schofiled, C.J, Scrutton, N.S.
登録日2015-06-22
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Mechanism of a Viral Collagen Prolyl Hydroxylase.
Biochemistry, 54, 2015
5C66
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E. Coli Alkaline Phosphatase in complex with tungstate
分子名称: Alkaline phosphatase, TUNGSTATE(VI)ION, ZINC ION
著者Peck, A, Herschlag, D.
登録日2015-06-22
公開日2016-06-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Tungstate as a Transition State Analog for Catalysis by Alkaline Phosphatase.
J.Mol.Biol., 428, 2016
8GO3
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BU of 8go3 by Molmil
Cryo-EM structure of Escherichia coli cytochrome bo3 in DDM detergent
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, COPPER (II) ION, Cytochrome bo(3) ubiquinol oxidase subunit 1, ...
著者Cao, H.Y, Li, K, Li, C.Y.
登録日2022-08-24
公開日2023-08-30
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Cryo-EM structure of Escherichia coli cytochrome bo3 in DDM detergent
To Be Published
5C7O
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BU of 5c7o by Molmil
Structure of human testis-specific glyceraldehyde-3-phosphate dehydrogenase holo form with NAD+
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, testis-specific, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Betts, L, Machius, M, Danshina, P, O'Brien, D.
登録日2015-06-24
公開日2016-03-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.729 Å)
主引用文献Structural analyses to identify selective inhibitors of glyceraldehyde 3-phosphate dehydrogenase-S, a sperm-specific glycolytic enzyme.
Mol. Hum. Reprod., 22, 2016
1FG5
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BU of 1fg5 by Molmil
CRYSTAL STRUCTURE OF BOVINE ALPHA-1,3-GALACTOSYLTRANSFERASE CATALYTIC DOMAIN.
分子名称: N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE
著者Gastinel, L.N, Bignon, C, Shaper, J.H, Joziasse, D.H.
登録日2000-07-28
公開日2001-07-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Bovine alpha1,3-galactosyltransferase catalytic domain structure and its relationship with ABO histo-blood group and glycosphingolipid glycosyltransferases.
EMBO J., 20, 2001
6V18
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BU of 6v18 by Molmil
immune receptor complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fibrinogen beta, GLYCEROL, ...
著者Lim, J.J, Rossjohn, J.
登録日2019-11-20
公開日2020-11-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The shared susceptibility epitope of HLA-DR4 binds citrullinated self-antigens and the TCR.
Sci Immunol, 6, 2021
8GQ1
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BU of 8gq1 by Molmil
HyHEL10 Fab complexed with hen egg lysozyme carrying arginine cluster in framework region of light chain.
分子名称: Heavy Chain of HyHel10 Antibody Fragment (Fab), Light Chain of HyHel10 Antibody Fragment (Fab), Lysozyme C, ...
著者Matsuura, H, Hirata, K, Sakai, N, Nakakido, M, Tsumoto, K.
登録日2022-08-28
公開日2023-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Arginine cluster introduction on framework region in anti-lysozyme antibody improved association rate constant by changing conformational diversity of CDR loops.
Protein Sci., 32, 2023
6V38
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BU of 6v38 by Molmil
Cryo-EM structure of Ca2+-bound hsSlo1 channel
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, CHOLESTEROL, ...
著者Tao, X, MacKinnon, R.
登録日2019-11-25
公開日2019-12-25
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Molecular structures of the human Slo1 K + channel in complex with beta 4.
Elife, 8, 2019
4QNQ
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BU of 4qnq by Molmil
Crystal Structure Analysis of full-length Bcl-XL in complex with the inhibitor ABT-263
分子名称: 4-(4-{[2-(4-chlorophenyl)-5,5-dimethylcyclohex-1-en-1-yl]methyl}piperazin-1-yl)-N-[(4-{[(2R)-4-(morpholin-4-yl)-1-(phenylsulfanyl)butan-2-yl]amino}-3-[(trifluoromethyl)sulfonyl]phenyl)sulfonyl]benzamide, Bcl-2-like protein 1
著者Korste, A, Vetter, I.R, Stoll, R.
登録日2014-06-18
公開日2015-10-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure Analysis of full-length Bcl-XL in complex with the inhibitor ABT-263
TO BE PUBLISHED
5CB3
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BU of 5cb3 by Molmil
Structural Insights into the Mechanism of Escherichia coli Ymdb
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, O-acetyl-ADP-ribose deacetylase
著者Zhang, W, Wang, C, Song, Y, Shao, C, Zhang, X, Zang, J.
登録日2015-06-30
公開日2015-11-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the mechanism of Escherichia coli YmdB: A 2'-O-acetyl-ADP-ribose deacetylase
J.Struct.Biol., 192, 2015
8GYK
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BU of 8gyk by Molmil
CryoEM structure of the RAD51_ADP filament
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA repair protein RAD51 homolog 1, MAGNESIUM ION
著者Miki, Y, Luo, S.C, Ho, M.C.
登録日2022-09-22
公開日2023-08-30
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献A RAD51-ADP double filament structure unveils the mechanism of filament dynamics in homologous recombination.
Nat Commun, 14, 2023
1FJD
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BU of 1fjd by Molmil
HUMAN PARVULIN-LIKE PEPTIDYL PROLYL CIS/TRANS ISOMERASE, HPAR14
分子名称: PEPTIDYL PROLYL CIS/TRANS ISOMERASE (PPIASE)
著者Terada, T, Shirouzu, M, Fukumori, Y, Fujimori, F, Ito, Y, Kigawa, T, Yokoyama, S, Uchida, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2000-08-08
公開日2001-08-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the human parvulin-like peptidyl prolyl cis/trans isomerase, hPar14.
J.Mol.Biol., 305, 2001
6V7D
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BU of 6v7d by Molmil
Human Arginase1 Complexed with Bicyclic Inhibitor Compound 10
分子名称: Arginase-1, MANGANESE (II) ION, {3-[(3aR,4R,5S,6aR)-4-azaniumyl-4-carboxyoctahydrocyclopenta[b]pyrrol-1-ium-5-yl]propyl}(trihydroxy)borate(1-)
著者Palte, R.L, Lesburg, C.A.
登録日2019-12-08
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Discovery and Optimization of Rationally Designed Bicyclic Inhibitors of Human Arginase to Enhance Cancer Immunotherapy.
Acs Med.Chem.Lett., 11, 2020
6V51
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BU of 6v51 by Molmil
Spin-labeled T4 Lysozyme (9/131FnbY)-(4-Amino-TEMPO)
分子名称: 4-amino-2,2,6,6-tetramethylpiperidin-1-ol, Endolysin
著者Liu, J, Morizumi, T, Ou, W.L, Wang, L, Ernst, O.P.
登録日2019-12-02
公開日2020-10-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Genetically Encoded Quinone Methides Enabling Rapid, Site-Specific, and Photocontrolled Protein Modification with Amine Reagents.
J.Am.Chem.Soc., 142, 2020
6V6L
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BU of 6v6l by Molmil
Co-structure of human glycogen synthase kinase beta with 1-(6-((2-((6-amino-5-nitropyridin-2-yl)amino)ethyl)amino)-2-(2,4-dichlorophenyl)pyridin-3-yl)-4-methylpiperazin-2-one
分子名称: 1-(6-((2-((6-amino-5-nitropyridin-2-yl)amino)ethyl)amino)-2-(2,4-dichlorophenyl)pyridin-3-yl)-4-methylpiperazin-2-one, Glycogen synthase kinase-3 beta, PHOSPHATE ION
著者Bussiere, D.E, Fang, E, Shu, W.
登録日2019-12-05
公開日2020-01-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Discovery and optimization of novel pyridines as highly potent and selective glycogen synthase kinase 3 inhibitors.
Bioorg.Med.Chem.Lett., 30, 2020
6VAX
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Crystal structure of human SDHA-SDHAF2 assembly intermediate
分子名称: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Sharma, P, Maklashina, E, Cecchini, G, Iverson, T.M.
登録日2019-12-18
公開日2020-08-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献The roles of SDHAF2 and dicarboxylate in covalent flavinylation of SDHA, the human complex II flavoprotein.
Proc.Natl.Acad.Sci.USA, 117, 2020
1FGX
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CRYSTAL STRUCTURE OF THE BOVINE BETA 1,4 GALACTOSYLTRANSFERASE (B4GALT1) CATALYTIC DOMAIN COMPLEXED WITH UMP
分子名称: BETA 1,4 GALACTOSYLTRANSFERASE, URIDINE-5'-MONOPHOSPHATE
著者Gastinel, L.N, Cambillau, C, Bourne, Y.
登録日2000-07-29
公開日2000-08-16
最終更新日2021-07-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of the bovine beta4galactosyltransferase catalytic domain and its complex with uridine diphosphogalactose.
EMBO J., 18, 1999
6VCM
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Crystal structure of E.coli RppH-DapF in complex with GTP, Mg2+ and F-
分子名称: CHLORIDE ION, Diaminopimelate epimerase, FLUORIDE ION, ...
著者Gao, A, Vasilyev, N, Kaushik, A, Duan, W, Serganov, A.
登録日2019-12-21
公開日2020-02-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Principles of RNA and nucleotide discrimination by the RNA processing enzyme RppH.
Nucleic Acids Res., 48, 2020

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