PDB: 45817 件ウェブページステータス検索Chemie searchBIRD

---

6A47	Structure of TREX2 in complex with a Y structured dsDNA 分子名称: DNA (5'-D(P*CP*CP*AP*GP*GP*CP*CP*CP*TP*CP*TP*AP*GP*GP*GP*CP*CP*TP*T)-3'), MAGNESIUM ION, SODIUM ION, ... 著者 Hsiao, Y.Y. 登録日 2018-06-19 公開日 2018-11-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural insights into the duplex DNA processing of TREX2 Nucleic Acids Res., 46, 2018
7DV2	Structure of Sulfolobus solfataricus SegB-DNA complex 分子名称: DNA (5'-D(P*AP*CP*GP*TP*AP*GP*AP*AP*GP*AP*GP*TP*CP*TP*AP*GP*AP*CP*TP*G)-3'), DNA (5'-D(P*CP*AP*GP*TP*CP*TP*AP*GP*AP*CP*TP*CP*TP*TP*CP*TP*AP*CP*GP*TP*A)-3'), SegB 著者 Yen, C.Y, Lin, M.G, Sun, Y.J, Hsiao, C.D. 登録日 2021-01-12 公開日 2021-12-22 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Chromosome segregation in Archaea: SegA- and SegB-DNA complex structures provide insights into segrosome assembly. Nucleic Acids Res., 49, 2021
6AK5	Binary Complex of Human DNA Polymerase Mu with MnGTP 分子名称: DNA-directed DNA/RNA polymerase mu, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ... 著者 Chang, Y.K, Wu, W.J, Tsai, M.D. 登録日 2018-08-30 公開日 2019-05-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
7UI4	Crystal structure of the DNA preQ0 insertase DpdA 分子名称: DNA-guanine transglycosylase, ZINC ION 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-03-28 公開日 2023-02-22 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 7-Deazaguanines in DNA: functional and structural elucidation of a DNA modification system. Nucleic Acids Res., 51, 2023
6AEH	Binary complex of human DNA Polymerase Mu with MnUTP 分子名称: DNA-directed DNA/RNA polymerase mu, MANGANESE (II) ION, SULFATE ION, ... 著者 Chang, Y.K, Wu, W.J, Tsai, M.D. 登録日 2018-08-04 公開日 2019-05-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
1FOK	STRUCTURE OF RESTRICTION ENDONUCLEASE FOKI BOUND TO DNA 分子名称: DNA (5'-D(*AP*TP*GP*AP*CP*TP*AP*GP*CP*GP*TP*TP*AP*TP*CP*AP*T P*CP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*GP*AP*TP*GP*AP*TP*AP*AP*CP*GP*CP*TP*AP*G P*TP*CP*A)-3'), PROTEIN (FOKI RESTRICTION ENDONUCLEASE) 著者 Aggarwal, D.A, Wah, J.A, Hirsch, L.F, Dorner, I, Schildkraut, A.K. 登録日 1997-04-18 公開日 1997-12-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of the multimodular endonuclease FokI bound to DNA. Nature, 388, 1997
8C62	Crystal structure of cisplatin/B-DNA adduct 分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), PLATINUM (II) ION 著者 Troisi, R, Tito, G, Ferraro, G, Sica, F, Merlino, A. 登録日 2023-01-11 公開日 2024-01-31 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer. Dalton Trans, 53, 2024
5F0Q	Crystal structure of C-terminal domain of the human DNA primase large subunit with bound DNA template/RNA primer 分子名称: DNA (5'-D(*GP*CP*CP*GP*CP*CP*AP*AP*CP*AP*TP*A)-3'), DNA primase large subunit, IRON/SULFUR CLUSTER, ... 著者 Tahirov, T.H, Baranovskiy, A.G, Babayeva, N.D. 登録日 2015-11-28 公開日 2016-03-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Mechanism of Concerted RNA-DNA Primer Synthesis by the Human Primosome. J.Biol.Chem., 291, 2016
5F55	Structure of RecJ complexed with DNA 分子名称: DNA (5'-D(*GP*AP*TP*GP*TP*AP*CP*GP*CP*TP*AP*GP*GP*C)-3'), MANGANESE (II) ION, SULFATE ION, ... 著者 Hua, Y, Zhao, Y, Cheng, K. 登録日 2015-12-04 公開日 2016-06-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for DNA 5 -end resection by RecJ Elife, 5, 2016
3LGB	Crystal Structure of the Fe-S Domain of the yeast DNA primase 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA primase large subunit, GLYCEROL, ... 著者 Sauguet, L, Pellegrini, L. 登録日 2010-01-20 公開日 2010-04-21 最終更新日 2011-10-05 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Shared Active Site Architecture between the Large Subunit of Eukaryotic Primase and DNA Photolyase PLOS ONE, 5, 2010
8D9J	SAMHD1-DNA complex 分子名称: CALCIUM ION, DNA (5'-D(*CP*AP*AP*TP*G)-3'), Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ... 著者 Hollis, T.J, Batalis, S.M. 登録日 2022-06-10 公開日 2023-07-05 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.82 Å) 主引用文献 Protein oxidation increases SAMHD1 binding ssDNA via its regulatory site. Nucleic Acids Res., 51, 2023
7KZV	Structure of the human fanconi anaemia Core-UBE2T-ID-DNA complex in closed state 分子名称: DNA (29-MER), E3 ubiquitin-protein ligase FANCL, Fanconi anemia core complex-associated protein 100, ... 著者 Wang, S.L, Pavletich, N.P. 登録日 2020-12-10 公開日 2021-03-10 最終更新日 2021-03-24 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structure of the FA core ubiquitin ligase closing the ID clamp on DNA. Nat.Struct.Mol.Biol., 28, 2021
7KZT	Structure of the human fanconi anaemia Core-UBE2T-ID-DNA complex in intermediate state 分子名称: DNA (22-MER), E3 ubiquitin-protein ligase FANCL, Fanconi anemia core complex-associated protein 100, ... 著者 Wang, S.L, Pavletich, N.P. 登録日 2020-12-10 公開日 2021-03-10 最終更新日 2021-03-24 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structure of the FA core ubiquitin ligase closing the ID clamp on DNA. Nat.Struct.Mol.Biol., 28, 2021
7KZS	Structure of the human fanconi anaemia Core-UBE2T-ID-DNA complex in open state 分子名称: DNA (25-MER), E3 ubiquitin-protein ligase FANCL, Fanconi anemia core complex-associated protein 100, ... 著者 Wang, S.L, Pavletich, N.P. 登録日 2020-12-10 公開日 2021-03-10 最終更新日 2021-03-24 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structure of the FA core ubiquitin ligase closing the ID clamp on DNA. Nat.Struct.Mol.Biol., 28, 2021
8KCM	MmCPDII-DNA complex containing low-dosage, light induced repaired DNA. 分子名称: Deoxyribodipyrimidine photo-lyase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Maestre-Reyna, M, Wang, P.-H, Nango, E, Hosokawa, Y, Saft, M, Furrer, A, Yang, C.-H, Ngura Putu, E.P.G, Wu, W.-J, Emmerich, H.-J, Engilberge, S, Caramello, N, Wranik, M, Glover, H.L, Franz-Badur, S, Wu, H.-Y, Lee, C.-C, Huang, W.-C, Huang, K.-F, Chang, Y.-K, Liao, J.-H, Weng, J.-H, Gad, W, Chang, C.-W, Pang, A.H, Gashi, D, Beale, E, Ozerov, D, Milne, C, Cirelli, C, Bacellar, C, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Spadaccini, R, Royant, A, Yamamoto, J, Iwata, S, Standfuss, J, Essen, L.-O, Bessho, Y, Tsai, M.-D. 登録日 2023-08-08 公開日 2023-11-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Visualizing the DNA repair process by a photolyase at atomic resolution. Science, 382, 2023
6W4I	APE1 Y269A product complex with abasic DNA 分子名称: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(P*(3DR)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), DNA (5'-D(P*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Freudenthal, B.D, Hoitsma, N.M. 登録日 2020-03-10 公開日 2020-06-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 AP-endonuclease 1 sculpts DNA through an anchoring tyrosine residue on the DNA intercalating loop. Nucleic Acids Res., 48, 2020
5DDM	Human DNA polymerase lambda- Apoenzyme and complex with 6 paired DNA 分子名称: DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), DNA polymerase lambda, ... 著者 Liu, M.S, Tsai, M.D. 登録日 2015-08-25 公開日 2016-02-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.802 Å) 主引用文献 Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda J.Am.Chem.Soc., 138, 2016
8DK3	CryoEM structure of Pseudomonas aeruginosa PA14 JetC ATPase domain bound to DNA and cWHD domain of JetA 分子名称: DNA (26-MER), JetA, JetC, ... 著者 Deep, A, Gu, Y, Gao, Y, Ego, K, Herzik, M, Zhou, H, Corbett, K. 登録日 2022-07-01 公開日 2022-10-05 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 The SMC-family Wadjet complex protects bacteria from plasmid transformation by recognition and cleavage of closed-circular DNA. Mol.Cell, 82, 2022
8C63	Crystal structure of arsenoplatin-1/B-DNA adduct obtained upon 4 h of soaking 分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, PLATINUM (II) ION, ... 著者 Troisi, R, Tito, G, Ferraro, G, Sica, F, Merlino, A. 登録日 2023-01-11 公開日 2024-01-31 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer. Dalton Trans, 53, 2024
8C64	Crystal structure of arsenoplatin-1/B-DNA adduct obtained upon 48 h of soaking 分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), PLATINUM (II) ION, arsenoplatin-1 著者 Troisi, R, Tito, G, Ferraro, G, Sica, F, Merlino, A. 登録日 2023-01-11 公開日 2024-01-31 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer. Dalton Trans, 53, 2024
6D9L	Ternary RsAgo Complex with Guide RNA and Target DNA Containing G-A Non-canonical Pair 分子名称: DNA (5'-D(P*TP*CP*GP*TP*CP*AP*CP*CP*TP*GP*AP*GP*CP*AP*GP*TP*AP*AP*C)-3'), MAGNESIUM ION, RNA (5'-R(P*UP*UP*AP*CP*UP*GP*CP*GP*CP*AP*GP*GP*UP*GP*AP*CP*GP*A)-3'), ... 著者 Liu, Y, Esyunina, D, Olovnikov, I, Teplova, M, Patel, D.J. 登録日 2018-04-30 公開日 2018-07-25 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Accommodation of Helical Imperfections in Rhodobacter sphaeroides Argonaute Ternary Complexes with Guide RNA and Target DNA. Cell Rep, 24, 2018
7BG9	The catalytic core lobe of human telomerase in complex with a telomeric DNA substrate 分子名称: DNA (5'-D(P*TP*TP*AP*GP*GP*G)-3'), Histone H2A, Histone H2B, ... 著者 Nguyen, T.H.D, Ghanim, G.E, Fountain, A.J, van Roon, A.M.M, Rangan, R, Das, R, Collins, K. 登録日 2021-01-06 公開日 2021-04-28 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of human telomerase holoenzyme with bound telomeric DNA. Nature, 593, 2021
7UXD	Crystal structure of APOBEC3G Catalytic domain complex with ssDNA containing 2'-deoxy Zebularine. 分子名称: DNA (5'-D(*AP*AP*TP*CP*CP*(DDN)P*AP*AP*A)-3'), DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION 著者 Maiti, A, Matsuo, H. 登録日 2022-05-05 公開日 2022-12-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of the catalytically active APOBEC3G bound to a DNA oligonucleotide inhibitor reveals tetrahedral geometry of the transition state. Nat Commun, 13, 2022
7AEO	Human ARTD2 in complex with DNA oligonucleotides 分子名称: DNA, Poly [ADP-ribose] polymerase 2, SULFATE ION 著者 Obaji, E, Maksimainen, M.M, Galera-Prat, A, Lehtio, L. 登録日 2020-09-17 公開日 2021-05-19 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Activation of PARP2/ARTD2 by DNA damage induces conformational changes relieving enzyme autoinhibition. Nat Commun, 12, 2021
1B69	THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA COMPLEX 分子名称: DNA (5'-D(*GP*AP*AP*TP*TP*TP*AP*CP*TP*AP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*TP*AP*GP*TP*AP*AP*AP*TP*TP*C)-3'), PROTEIN (INTEGRASE) 著者 Clubb, R.T, Wojciak, J.M, Connolly, K.M. 登録日 1999-01-21 公開日 1999-09-29 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 NMR structure of the Tn916 integrase-DNA complex. Nat.Struct.Biol., 6, 1999

<65666768697071727374757677787980>