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3ZU2
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Structure of the enoyl-ACP reductase FabV from Yersinia pestis with the cofactor NADH (SIRAS)
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, PUTATIVE REDUCTASE YPO4104/Y4119/YP_4011, SODIUM ION
著者Hirschbeck, M.W, Kuper, J, Kisker, C.
登録日2011-07-13
公開日2012-01-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the Yersinia Pestis Fabv Enoyl-Acp Reductase and its Interaction with Two 2-Pyridone Inhibitors
Structure, 20, 2012
3ZKB
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BU of 3zkb by Molmil
CRYSTAL STRUCTURE OF THE ATPASE REGION OF Mycobacterium tuberculosis GyrB WITH AMPPNP
分子名称: DNA GYRASE SUBUNIT B, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Agrawal, A, Roue, M, Spitzfaden, C, Petrella, S, Aubry, A, Volker, C, Mossakowska, D, Hann, M, Bax, B, Mayer, C.
登録日2013-01-22
公開日2013-09-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Mycobacterium Tuberculosis DNA Gyrase ATPase Domain Structures Suggest a Dissociative Mechanism that Explains How ATP Hydrolysis is Coupled to Domain Motion.
Biochem.J., 456, 2013
6E3B
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BU of 6e3b by Molmil
STRUCTURE OF Siw14 CATALYTIC CORE
分子名称: SULFATE ION, Tyrosine-protein phosphatase SIW14
著者Florio, T, Lokareddy, R, Cingolani, G.
登録日2018-07-13
公開日2019-02-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular Architecture of the Inositol Phosphatase Siw14.
Biochemistry, 58, 2019
4A0O
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BU of 4a0o by Molmil
Symmetry-free cryo-EM map of TRiC in the nucleotide-free (apo) state
分子名称: T-COMPLEX PROTEIN 1 SUBUNIT BETA
著者Cong, Y, Schroder, G.F, Meyer, A.S, Jakana, J, Ma, B, Dougherty, M.T, Schmid, M.F, Reissmann, S, Levitt, M, Ludtke, S.L, Frydman, J, Chiu, W.
登録日2011-09-10
公開日2012-02-15
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (10.5 Å)
主引用文献Symmetry-Free Cryo-Em Structures of the Chaperonin Tric Along its ATPase-Driven Conformational Cycle.
Embo J., 31, 2012
483D
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BU of 483d by Molmil
CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA
分子名称: SARCIN/RICIN RRNA DOMAIN
著者Correll, C.C, Wool, I.G, Munishkin, A.
登録日1999-07-23
公開日1999-10-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献The two faces of the Escherichia coli 23 S rRNA sarcin/ricin domain: the structure at 1.11 A resolution.
J.Mol.Biol., 292, 1999
7E80
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BU of 7e80 by Molmil
Cryo-EM structure of the flagellar rod with hook and export apparatus from Salmonella
分子名称: Flagellar MS ring L1, Flagellar MS ring L2, Flagellar basal body rod protein FlgB, ...
著者Tan, J.X, Chang, S.H, Wang, X.F, Xu, C.H, Zhou, Y, Zhang, X, Zhu, Y.Q.
登録日2021-02-28
公開日2021-04-28
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Structural basis of assembly and torque transmission of the bacterial flagellar motor.
Cell, 184, 2021
7E82
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BU of 7e82 by Molmil
Cryo-EM structure of the flagellar rod with partial hook from Salmonella
分子名称: Flagellar MS ring L1, Flagellar MS ring L2, Flagellar basal body rod protein FlgB, ...
著者Tan, J.X, Chang, S.H, Wang, X.F, Xu, C.H, Zhou, Y, Zhang, X, Zhu, Y.Q.
登録日2021-02-28
公開日2021-04-28
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of assembly and torque transmission of the bacterial flagellar motor.
Cell, 184, 2021
7EGG
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BU of 7egg by Molmil
TFIID lobe B subcomplex
分子名称: Transcription initiation factor TFIID subunit 10, Transcription initiation factor TFIID subunit 12, Transcription initiation factor TFIID subunit 4, ...
著者Chen, X, Wu, Z, Li, J, Zhao, D, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
4DQK
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BU of 4dqk by Molmil
Crystal structure of the FAD binding domain of cytochrome P450 BM3
分子名称: Bifunctional P-450/NADPH-P450 reductase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
著者Joyce, M.G, Leys, D.
登録日2012-02-16
公開日2012-03-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of the FAD/NADPH-binding domain of flavocytochrome P450 BM3.
Febs J., 279, 2012
7EGF
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BU of 7egf by Molmil
TFIID lobe A subcomplex
分子名称: TATA-box-binding protein, Transcription initiation factor TFIID subunit 10, Transcription initiation factor TFIID subunit 11, ...
著者Chen, X, Wu, Z, Li, J, Zhao, D, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 2021
7EB2
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BU of 7eb2 by Molmil
Cryo-EM structure of human GABA(B) receptor-Gi protein complex
分子名称: (3S)-5,7-ditert-butyl-3-oxidanyl-3-(trifluoromethyl)-1-benzofuran-2-one, Gamma-aminobutyric acid type B receptor subunit 1, Gamma-aminobutyric acid type B receptor subunit 2, ...
著者Shen, C, Mao, C, Xu, C, Jin, N, Zhang, H, Shen, D, Shen, Q, Wang, X, Hou, T, Rondard, P, Chen, Z, Pin, J, Zhang, Y, Liu, J.
登録日2021-03-08
公開日2021-05-05
最終更新日2021-07-07
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis of GABA B receptor-G i protein coupling.
Nature, 594, 2021
4DWL
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BU of 4dwl by Molmil
Avd molecule from Bordetella bacteriophage DGR
分子名称: Bbp7, PHOSPHATE ION
著者Ghosh, P, Al-Ayyoubi, M.
登録日2012-02-24
公開日2013-02-27
最終更新日2015-01-14
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structure of the essential diversity-generating retroelement protein bAvd and its functionally important interaction with reverse transcriptase.
Structure, 21, 2013
4E0G
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BU of 4e0g by Molmil
Protelomerase tela/DNA hairpin product/vanadate complex
分子名称: DNA (5'-D(*CP*AP*TP*AP*AP*TP*AP*AP*CP*AP*AP*TP*A)-3'), DNA (5'-D(*TP*CP*AP*TP*GP*AP*TP*AP*TP*TP*GP*TP*TP*AP*TP*TP*AP*TP*G)-3'), Protelomerase, ...
著者Shi, K, Aihara, H.
登録日2012-03-03
公開日2013-02-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献An enzyme-catalyzed multistep DNA refolding mechanism in hairpin telomere formation.
Plos Biol., 11, 2013
7CZV
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BU of 7czv by Molmil
S protein of SARS-CoV-2 in complex bound with P5A-1B6_3B
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin heavy variable 3-30-3,chain H of P5A-1B6_3B,Immunoglobulin gamma-1 heavy chain, ...
著者Yan, R.H, Zhang, Y.Y, Li, Y.N, Zhou, Q.
登録日2020-09-09
公開日2021-03-10
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for bivalent binding and inhibition of SARS-CoV-2 infection by human potent neutralizing antibodies.
Cell Res., 31, 2021
3XIS
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BU of 3xis by Molmil
A METAL-MEDIATED HYDRIDE SHIFT MECHANISM FOR XYLOSE ISOMERASE BASED ON THE 1.6 ANGSTROMS STREPTOMYCES RUBIGINOSUS STRUCTURES WITH XYLITOL AND D-XYLOSE
分子名称: D-xylose, MAGNESIUM ION, XYLOSE ISOMERASE, ...
著者Whitlow, M, Howard, A.J.
登録日1991-03-25
公開日1992-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose.
Proteins, 9, 1991
7CZX
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BU of 7czx by Molmil
S protein of SARS-CoV-2 in complex bound with P5A-1B9
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, IG c168_light_IGKV4-1_IGKJ4,Uncharacterized protein, ...
著者Yan, R.H, Zhang, Y.Y, Li, Y.N, Zhou, Q.
登録日2020-09-09
公開日2021-03-10
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis for bivalent binding and inhibition of SARS-CoV-2 infection by human potent neutralizing antibodies.
Cell Res., 31, 2021
3ZDS
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BU of 3zds by Molmil
Structure of homogentisate 1,2-dioxygenase in complex with reaction intermediates of homogentisate with oxygen.
分子名称: 2-(3,6-DIHYDROXYPHENYL)ACETIC ACID, 2-(6-oxidanyl-3-oxidanylidene-cyclohexa-1,4-dien-1-yl)ethanoic acid, 2-[(6R)-6-(dioxidanyl)-6-oxidanyl-3-oxidanylidene-cyclohexa-1,4-dien-1-yl]ethanoic acid, ...
著者Jeoung, J.-H, Bommer, M, Lin, T.-Y, Dobbek, H.
登録日2012-11-30
公開日2013-07-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Visualizing the Substrate-, Superoxo-, Alkylperoxo- and Product-Bound States at the Non-Heme Fe(II) Site of Homogentisate Dioxygenase
Proc.Natl.Acad.Sci.USA, 110, 2013
3ZLP
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BU of 3zlp by Molmil
Crystal structure of Schistosoma mansoni Peroxiredoxin 1 C48P mutant form with four decamers in the asymmetric unit
分子名称: THIOREDOXIN PEROXIDASE
著者Saccoccia, F, Angelucci, F, Ardini, M, Boumis, G, Brunori, M, DiLeandro, L, Ippoliti, R, Miele, A.E, Natoli, G, Scotti, S, Bellelli, A.
登録日2013-02-04
公開日2013-09-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.515 Å)
主引用文献Switching between the Alternative Structures and Functions of a 2-Cys Peroxiredoxin, by Site-Directed Mutagenesis
J.Mol.Biol., 425, 2013
7D98
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BU of 7d98 by Molmil
Crystal structure of full-length CbnR complexed with the target DNA complex
分子名称: DNA (56-mer), LysR-type regulatory protein
著者Senda, M, Giannopoulou, E, Senda, T.
登録日2020-10-12
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Crystal structure of the full-length LysR-type transcription regulator CbnR in complex with promoter DNA.
Febs J., 288, 2021
4DQE
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BU of 4dqe by Molmil
Crystal Structure of (G16C/L38C) HIV-1 Protease in Complex with DRV
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, ACETATE ION, Aspartyl protease
著者Schiffer, C.A, Mittal, S.
登録日2012-02-15
公開日2012-03-07
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Hydrophobic core flexibility modulates enzyme activity in HIV-1 protease.
J.Am.Chem.Soc., 134, 2012
7D6E
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BU of 7d6e by Molmil
Structural insights into membrane remodeling by SNX1
分子名称: Sorting nexin-1
著者Zhang, Y, Pang, X, Sun, F.
登録日2020-09-30
公開日2021-03-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Structural insights into membrane remodeling by SNX1.
Proc.Natl.Acad.Sci.USA, 118, 2021
7D6D
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BU of 7d6d by Molmil
Structural insights into membrane remodeling by SNX1
分子名称: Sorting nexin-1
著者Zhang, Y, Pang, X, Sun, F.
登録日2020-09-30
公開日2021-03-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Structural insights into membrane remodeling by SNX1.
Proc.Natl.Acad.Sci.USA, 118, 2021
8G4Z
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BU of 8g4z by Molmil
E. coli DHFR complex with NADP+ and folate: EF-X off model by Laue diffraction (no electric field)
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Greisman, J.B, Dalton, K.M, Brookner, D.E, Klureza, M.A, Hekstra, D.R.
登録日2023-02-10
公開日2024-01-03
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Perturbative diffraction methods resolve a conformational switch that facilitates a two-step enzymatic mechanism.
Proc.Natl.Acad.Sci.USA, 121, 2024
8G50
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BU of 8g50 by Molmil
E. coli DHFR complex with NADP+ and folate: EF-X excited state model by Laue diffraction (electric field along b axis; 8-fold extrapolation of structure factor differences)
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Greisman, J.B, Dalton, K.M, Brookner, D.E, Klureza, M.A, Hekstra, D.R.
登録日2023-02-10
公開日2024-01-03
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Perturbative diffraction methods resolve a conformational switch that facilitates a two-step enzymatic mechanism.
Proc.Natl.Acad.Sci.USA, 121, 2024
7DKZ
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BU of 7dkz by Molmil
Structure of plant photosystem I-light harvesting complex I supercomplex
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Wang, J, Yu, L.J, Wang, W.
登録日2020-11-25
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.393 Å)
主引用文献Structure of plant photosystem I-light harvesting complex I supercomplex at 2.4 angstrom resolution.
J Integr Plant Biol, 63, 2021

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