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1ZCR
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BU of 1zcr by Molmil
Crystal structure of human Transthyretin with bound iodide
分子名称: IODIDE ION, Transthyretin
著者Hornberg, A, Hultdin, U.W, Olofsson, A, Sauer-Eriksson, A.E.
登録日2005-04-13
公開日2005-07-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The effect of iodide and chloride on transthyretin structure and stability
Biochemistry, 44, 2005
6CK5
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BU of 6ck5 by Molmil
PRPP riboswitch from T. mathranii bound to PRPP
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, BARIUM ION, MAGNESIUM ION, ...
著者Knappenberger, A.J, Reiss, C.W, Strobel, S.A.
登録日2018-02-27
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structures of two aptamers with differing ligand specificity reveal ruggedness in the functional landscape of RNA.
Elife, 7, 2018
241D
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BU of 241d by Molmil
EXTENSION OF THE FOUR-STRANDED INTERCALATED CYTOSINE MOTIF BY ADENINE.ADENINE BASE PAIRING IN THE CRYSTAL STRUCTURE OF D(CCCAAT)
分子名称: DNA (5'-D(*CP*CP*CP*AP*AP*T)-3')
著者Berger, I, Kang, C, Fredian, A, Ratliff, R, Moyzis, R, Rich, A.
登録日1995-12-07
公開日1996-04-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Extension of the four-stranded intercalated cytosine motif by adenine.adenine base pairing in the crystal structure of d(CCCAAT).
Nat.Struct.Biol., 2, 1995
1ZEM
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BU of 1zem by Molmil
Crystal Structure of NAD+-Bound Xylitol Dehydrogenase
分子名称: MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, xylitol dehydrogenase
著者Ehrensberger, A.H, Elling, R.A, Wilson, D.K.
登録日2005-04-19
公開日2006-03-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-guided engineering of xylitol dehydrogenase cosubstrate specificity.
Structure, 14, 2006
1YZD
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BU of 1yzd by Molmil
Crystal structure of an RNA duplex containing a site specific 2'-amine substitution at a C-G Watson-Crick base pair
分子名称: CALCIUM ION, RNA 5'-R(*GP*CP*AP*GP*AP*(A5M)P*UP*UP*AP*AP*GP*UP*CP*UP*GP*C)-3'
著者Gherghe, C.M, Krahn, J.M, Weeks, K.M.
登録日2005-02-28
公開日2005-10-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures, reactivity and inferred acylation transition States for 2'-amine substituted RNA.
J.Am.Chem.Soc., 127, 2005
1GPQ
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BU of 1gpq by Molmil
Structure of ivy complexed with its target, HEWL
分子名称: INHIBITOR OF VERTEBRATE LYSOZYME, LYSOZYME C
著者Abergel, C, Monchois, V, Claverie, J.-M.
登録日2001-11-08
公開日2003-03-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure and Evolution of the Ivy Protein Family, Unexpected Lysozyme Inhibitors in Gram-Negative Bacteria.
Proc.Natl.Acad.Sci.USA, 104, 2007
1T4F
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BU of 1t4f by Molmil
Structure of human MDM2 in complex with an optimized p53 peptide
分子名称: SULFATE ION, Ubiquitin-protein ligase E3 Mdm2, optimized p53 peptide
著者Grasberger, B.L, Schubert, C, Koblish, H.K, Carver, T.E, Franks, C.F, Zhao, S.Y, Lu, T, LaFrance, L.V, Parks, D.J.
登録日2004-04-29
公開日2005-02-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery and cocrystal structure of benzodiazepinedione HDM2 antagonists that activate p53 in cells
J.Med.Chem., 48, 2005
6RGI
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BU of 6rgi by Molmil
Partially unfolded cytochrome c in complex with sulfonatocalix[6]arene
分子名称: Cytochrome c iso-1, HEME C, IMIDAZOLE, ...
著者Engilberge, S, Rennie, M.L, Crowley, P.B.
登録日2019-04-16
公開日2019-07-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Calixarene capture of partially unfolded cytochrome c.
Febs Lett., 593, 2019
1RC8
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BU of 1rc8 by Molmil
T4 Polynucleotide Kinase bound to 5'-GTCAC-3' ssDNA
分子名称: 5'-D(*GP*TP*CP*AP*C)-3', ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
著者Eastberg, J.H, Pelletier, J, Stoddard, B.L.
登録日2003-11-03
公開日2004-02-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Recognition of DNA substrates by T4 bacteriophage polynucleotide kinase.
Nucleic Acids Res., 32, 2004
1U5S
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BU of 1u5s by Molmil
NMR structure of the complex between Nck-2 SH3 domain and PINCH-1 LIM4 domain
分子名称: Cytoplasmic protein NCK2, PINCH protein, ZINC ION
著者Vaynberg, J, Fukuda, T, Vinogradova, O, Velyvis, A, Ng, L, Wu, C, Qin, J.
登録日2004-07-28
公開日2005-04-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of an ultraweak protein-protein complex and its crucial role in regulation of cell morphology and motility.
Mol.Cell, 17, 2005
6RSL
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BU of 6rsl by Molmil
Cytochrome c co-crystallized with 10 eq. sulfonato-calix[8]arene and 25 eq. spermine (dry-coating method) - structure III
分子名称: Cytochrome c iso-1, HEME C, SPERMINE, ...
著者Engilberge, S, Crowley, P.B.
登録日2019-05-21
公開日2019-09-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.988 Å)
主引用文献Tuning Protein Frameworks via Auxiliary Supramolecular Interactions.
Acs Nano, 13, 2019
6RSK
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BU of 6rsk by Molmil
Cytochrome c co-crystallized with 20 eq. sulfonato-calix[8]arene and 15 eq. spermine - structure II
分子名称: Cytochrome c iso-1, HEME C, SPERMINE, ...
著者Engilberge, S, Crowley, P.B.
登録日2019-05-21
公開日2019-09-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Tuning Protein Frameworks via Auxiliary Supramolecular Interactions.
Acs Nano, 13, 2019
6RSI
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BU of 6rsi by Molmil
cytochrome c co-crystallized with 25 eq. sulfonato-calix[8]arene - structure 0
分子名称: Cytochrome c iso-1, GLYCEROL, HEME C, ...
著者Engilberge, S, Crowley, P.B.
登録日2019-05-21
公開日2019-09-18
最終更新日2019-10-23
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Tuning Protein Frameworks via Auxiliary Supramolecular Interactions.
Acs Nano, 13, 2019
1U6O
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BU of 1u6o by Molmil
Mispairing of a Site-Specific Major Groove (2S,3S)-N6-(2,3,4-Trihydroxybutyl)-2-deoxyadenosyl DNA Adduct of Butadiene Diol Epoxide with Deoxyguanosine: Formation of a dA(anti)dG(anti) Pairing Interaction
分子名称: 5'-D(*CP*GP*GP*AP*CP*(2BU)P*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*GP*GP*TP*CP*CP*G)-3'
著者Scholdberg, T.A, Nechev, L.N, Merritt, W.K, Harris, T.M, Harris, C.M, Lloyd, R.S, Stone, M.P.
登録日2004-07-30
公開日2004-08-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Mispairing of a Site Specific Major Groove (2S,3S)-N6-(2,3,4-Trihydroxybutyl)-2'-deoxyadenosyl DNA Adduct of Butadiene Diol Epoxide with Deoxyguanosine: Formation of a dA(anti)dG(anti) Pairing Interaction.
CHEM.RES.TOXICOL., 18, 2005
1U6G
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BU of 1u6g by Molmil
Crystal Structure of The Cand1-Cul1-Roc1 Complex
分子名称: Cullin homolog 1, RING-box protein 1, TIP120 protein, ...
著者Goldenberg, S.J, Shumway, S.D, Cascio, T.C, Garbutt, K.C, Liu, J, Xiong, Y, Zheng, N.
登録日2004-07-29
公開日2004-12-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the Cand1-Cul1-Roc1 complex reveals regulatory mechanisms for the assembly of the multisubunit cullin-dependent ubiquitin ligases
Cell(Cambridge,Mass.), 119, 2004
6SBU
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BU of 6sbu by Molmil
X-ray Structure of Human LDHA with an Allosteric Inhibitor (Compound 3)
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 4-[[4-[(5-chloranylthiophen-2-yl)carbonylamino]-1,3-bis(oxidanylidene)isoindol-2-yl]methyl]benzoic acid, L-lactate dehydrogenase A chain
著者Friberg, A, Puetter, V, Nguyen, D, Rehwinkel, H.
登録日2019-07-22
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Structural Evidence for Isoform-Selective Allosteric Inhibition of Lactate Dehydrogenase A.
Acs Omega, 5, 2020
6SBV
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BU of 6sbv by Molmil
X-ray Structure of Human LDH-A with an Allosteric Inhibitor (Compound 7)
分子名称: L-lactate dehydrogenase A chain, ~{N}-[3-[(7-nitrodibenzofuran-2-yl)sulfonylamino]phenyl]-1-oxidanyl-cyclopropane-1-carboxamide
著者Friberg, A, Puetter, V, Nguyen, D, Rehwinkel, H.
登録日2019-07-22
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Evidence for Isoform-Selective Allosteric Inhibition of Lactate Dehydrogenase A.
Acs Omega, 5, 2020
1U6N
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BU of 1u6n by Molmil
Solution Structure of an Oligodeoxynucleotide Containing a Butadiene Derived N1 b-Hydroxyalkyl Adduct on Deoxyinosine in the Human N-ras Codon 61 Sequence
分子名称: 5'-D(*CP*GP*GP*AP*CP*(2BD)P*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3'
著者Scholdberg, T.A, Merritt, W.K, Dean, S.M, Kowalcyzk, A, Harris, T.M, Harris, C.M, Lloyd, R.S, Stone, M.P.
登録日2004-07-30
公開日2004-08-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of an Oligodeoxynucleotide Containing a Butadiene Oxide-Derived N1 Beta-Hydroxyalkyl Deoxyinosine Adduct in the Human N-ras Codon 61 Sequence.
Biochemistry, 44, 2005
1RPZ
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BU of 1rpz by Molmil
T4 POLYNUCLEOTIDE KINASE BOUND TO 5'-TGCAC-3' SSDNA
分子名称: 5'-D(*TP*GP*CP*AP*C)-3', ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
著者Eastberg, J.H, Pelletier, J, Stoddard, B.L.
登録日2003-12-03
公開日2004-02-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Recognition of DNA substrates by T4 bacteriophage polynucleotide kinase.
Nucleic Acids Res., 32, 2004
1CTZ
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BU of 1ctz by Molmil
MUTATION OF TYROSINE-67 IN CYTOCHROME C SIGNIFICANTLY ALTERS THE LOCAL HEME ENVIRONMENT
分子名称: CYTOCHROME C, HEME C, SULFATE ION
著者Berghuis, A.M, Brayer, G.D.
登録日1993-02-15
公開日1993-07-15
最終更新日2021-03-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mutation of tyrosine-67 to phenylalanine in cytochrome c significantly alters the local heme environment.
J.Mol.Biol., 235, 1994
3ZOU
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BU of 3zou by Molmil
Native structure of Farnesyl Pyrophosphate Synthase from Pseudomonas aeruginosa PA01, with bound fragment SPB02696, and substrate geranyl pyrophosphate.
分子名称: 3-(2-oxo-1,3-benzoxazol-3(2H)-yl)propanoic acid, DIMETHYL SULFOXIDE, FARNESYL PYROPHOSPHATE SYNTHASE, ...
著者Schmidberger, J.W, Schnell, R, Schneider, G.
登録日2013-02-25
公開日2014-03-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural Characterization of Substrate and Inhibitor Binding to Farnesyl Pyrophosphate Synthase from Pseudomonas Aeruginosa
Acta Crystallogr.,Sect.D, 71, 2015
3ZMC
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BU of 3zmc by Molmil
Native structure of Farnesyl Pyrophosphate Synthase from Pseudomonas aeruginosa PA01, with bound substrate molecule Geranyl pyrophosphate.
分子名称: DIMETHYL SULFOXIDE, GERANYL DIPHOSPHATE, GERANYLTRANSTRANSFERASE, ...
著者Schmidberger, J.W, Schnell, R, Schneider, G.
登録日2013-02-07
公開日2014-02-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural Characterization of Substrate and Inhibitor Binding to Farnesyl Pyrophosphate Synthase from Pseudomonas Aeruginosa
Acta Crystallogr.,Sect.D, 71, 2015
1CTY
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BU of 1cty by Molmil
MUTATION OF TYROSINE-67 IN CYTOCHROME C SIGNIFICANTLY ALTERS THE LOCAL HEME ENVIRONMENT
分子名称: CYTOCHROME C, HEME C, SULFATE ION
著者Berghuis, A.M, Brayer, G.D.
登録日1993-02-15
公開日1993-07-15
最終更新日2021-03-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mutation of tyrosine-67 to phenylalanine in cytochrome c significantly alters the local heme environment.
J.Mol.Biol., 235, 1994
1CRZ
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BU of 1crz by Molmil
CRYSTAL STRUCTURE OF THE E. COLI TOLB PROTEIN
分子名称: TOLB PROTEIN
著者Abergel, C, Bouveret, E, Claverie, J.-M, Brown, K, Rigal, A, Lazdunski, C, Benedetti, H.
登録日1999-08-16
公開日2000-08-16
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the Escherichia coli TolB protein determined by MAD methods at 1.95 A resolution.
Structure Fold.Des., 7, 1999
3ZCD
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BU of 3zcd by Molmil
Native structure of Farnesyl Pyrophosphate Synthase from Pseudomonas aeruginosa PA01.
分子名称: GERANYLTRANSTRANSFERASE
著者Schmidberger, J.W, Schnell, R, Schneider, G.
登録日2012-11-19
公開日2013-12-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural Characterization of Substrate and Inhibitor Binding to Farnesyl Pyrophosphate Synthase from Pseudomonas Aeruginosa.
Acta Crystallogr.,Sect.D, 71, 2015

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