PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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5MF0	Crystal structure of Smad4-MH1 bound to the GGCCG site. 分子名称: CHLORIDE ION, DNA (5'-D(P*AP*CP*GP*GP*GP*CP*CP*GP*CP*GP*GP*CP*CP*CP*GP*T)-3'), MH1 domain of human Smad4, ... 著者 Kaczmarska, Z, Freier, R, Marquez, J.A, Macias, M.J. 登録日 2016-11-16 公開日 2017-11-15 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.03 Å) 主引用文献 Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors. Nat Commun, 8, 2017
5OAY	M. tuberculosis [4Fe-4S] protein WhiB1 is a four-helix bundle that forms a NO-sensitive complex with sigmaA and regulates the major virulence factor ESX-1 分子名称: IRON/SULFUR CLUSTER, Transcriptional regulator WhiB1 著者 Williamson, M.P, Green, J, Hounslow, A.M. 登録日 2017-06-25 公開日 2018-01-03 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure of a Wbl protein and implications for NO sensing by M. tuberculosis. Nat Commun, 8, 2017
5OKC	Crystal structure of the Ctf18-1-8 module from Ctf18-RFC 分子名称: 1,2-ETHANEDIOL, Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, ... 著者 Grabarczyk, D.B, Kisker, C. 登録日 2017-07-25 公開日 2017-12-20 最終更新日 2018-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Basis for the Recruitment of Ctf18-RFC to the Replisome. Structure, 26, 2018
5MEZ	Crystal structure of Smad4-MH1 bound to the GGCT site. 分子名称: CHLORIDE ION, DNA (5'-D(P*GP*CP*AP*GP*GP*CP*TP*AP*GP*CP*CP*TP*GP*CP*A)-3'), MH1 domain of human Smad4, ... 著者 Kaczmarska, Z, Freier, R, Marquez, J.A, Macias, M.J. 登録日 2016-11-16 公開日 2017-11-15 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.98 Å) 主引用文献 Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors. Nat Commun, 8, 2017
5SY5	Crystal Structure of the Heterodimeric NPAS1-ARNT Complex 分子名称: Aryl hydrocarbon receptor nuclear translocator, Neuronal PAS domain-containing protein 1 著者 Wu, D, Su, X, Potluri, N, Kim, Y, Rastinejad, F. 登録日 2016-08-10 公開日 2016-11-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.201 Å) 主引用文献 NPAS1-ARNT and NPAS3-ARNT crystal structures implicate the bHLH-PAS family as multi-ligand binding transcription factors. Elife, 5, 2016
7P6F	1.93 A resolution X-ray crystal structure of the transcriptional regulator SrnR from Streptomyces griseus 分子名称: ACETATE ION, SODIUM ION, Transcriptional regulator SrnR 著者 Mazzei, L, Ciurli, S. 登録日 2021-07-16 公開日 2022-05-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Structure, dynamics, and function of SrnR, a transcription factor for nickel-dependent gene expression. Metallomics, 13, 2021
5FV7	Human Fen1 in complex with an N-hydroxyurea compound 分子名称: 1-[(2S)-2,3-dihydro-1,4-benzodioxin-2-ylmethyl]-3-hydroxythieno[3,2-d]pyrimidine-2,4(1H,3H)-dione, FLAP ENDONUCLEASE 1, MAGNESIUM ION 著者 Exell, J.C, Thompson, M.J, Finger, L.D, Shaw, S.K, Abbott, W.M, McWhirter, C, Debreczeni, J.E, Jones, C.D, Nissink, J.W.M, Ward, T.A, Sioberg, C.W.L, Molina, D.M, Durant, S.T, Grasby, J.A. 登録日 2016-02-03 公開日 2016-08-17 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Cellular Active N-Hydroxyurea Fen1 Inhibitors Block Substrate Entry to the Active Site Nat.Chem.Biol., 12, 2016
6QKQ	NMR solution structure of LSR2-T112D binding domain. 分子名称: Nucleoid-associated protein Lsr2 著者 Barthe, P, Cohen-Gonsaud, M, Mukamolova, G.V. 登録日 2019-01-30 公開日 2019-07-17 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Protein kinase B controls Mycobacterium tuberculosis growth via phosphorylation of the transcriptional regulator Lsr2 at threonine 112. Mol.Microbiol., 112, 2019
6QKP	NMR solution structure of LSR2 binding domain. 分子名称: Nucleoid-associated protein Lsr2 著者 Barthe, P, Cohen-Gonsaud, M, Mukamolova, G.V. 登録日 2019-01-30 公開日 2019-07-17 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Protein kinase B controls Mycobacterium tuberculosis growth via phosphorylation of the transcriptional regulator Lsr2 at threonine 112. Mol.Microbiol., 112, 2019
6SRN	Structural basis for control of antibiotic production by bacterial hormones 分子名称: 4-(Hydroxymethyl)-2-propylfuran-3-carboxylic acid, GLYCEROL, TetR family transcriptional regulator 著者 Fulop, V. 登録日 2019-09-05 公開日 2020-09-30 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Molecular basis for control of antibiotic production by a bacterial hormone. Nature, 590, 2021
8IQG	Cryo-EM structure of the monomeric human CAF1-H3-H4 complex 分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ... 著者 Liu, C.P, Yu, Z.Y, Xu, R.M. 登録日 2023-03-16 公開日 2023-08-16 最終更新日 2023-09-06 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1. Science, 381, 2023
8IQF	Cryo-EM structure of the dimeric human CAF1-H3-H4 complex 分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ... 著者 Liu, C.P, Yu, Z.Y, Xu, R.M. 登録日 2023-03-16 公開日 2023-08-16 最終更新日 2023-09-06 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1. Science, 381, 2023
6K15	RSC substrate-recruitment module 分子名称: Chromatin structure-remodeling complex protein RSC3, Chromatin structure-remodeling complex protein RSC30, Chromatin structure-remodeling complex protein RSC58, ... 著者 Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C. 登録日 2019-05-09 公開日 2019-11-13 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of the RSC complex bound to the nucleosome. Science, 366, 2019
5X80	CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS MARR FAMILY PROTEIN RV2887 COMPLEX WITH SALICYLIC ACID 分子名称: 2-HYDROXYBENZOIC ACID, SULFATE ION, Uncharacterized HTH-type transcriptional regulator Rv2887 著者 Gao, Y.R, Li, D.F, Wang, D.C, Bi, L.J. 登録日 2017-02-28 公開日 2017-08-09 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural analysis of the regulatory mechanism of MarR protein Rv2887 in M. tuberculosis Sci Rep, 7, 2017
3BPX	Crystal Structure of MarR 分子名称: 2-HYDROXYBENZOIC ACID, SODIUM ION, Transcriptional regulator 著者 Saridakis, V, Shahinas, D, Xu, X, Christendat, D. 登録日 2007-12-19 公開日 2008-05-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural insight on the mechanism of regulation of the MarR family of proteins: high-resolution crystal structure of a transcriptional repressor from Methanobacterium thermoautotrophicum. J.Mol.Biol., 377, 2008
4NC7	N-terminal domain of delta-subunit of RNA polymerase complexed with I3C and nickel ions 分子名称: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, DNA-directed RNA polymerase subunit delta, NICKEL (II) ION 著者 Demo, G, Papouskova, V, Komarek, J, Sanderova, H, Rabatinova, A, Krasny, L, Zidek, L, Sklenar, V, Wimmerova, M. 登録日 2013-10-24 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase. J.Struct.Biol., 187, 2014
3BPV	Crystal Structure of MarR 分子名称: Transcriptional regulator 著者 Saridakis, V, Shahinas, D, Xu, X, Christendat, D. 登録日 2007-12-19 公開日 2008-05-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural insight on the mechanism of regulation of the MarR family of proteins: high-resolution crystal structure of a transcriptional repressor from Methanobacterium thermoautotrophicum. J.Mol.Biol., 377, 2008
4ETS	Crystal structure of Campylobacter jejuni ferric uptake regulator 分子名称: CHLORIDE ION, Ferric uptake regulation protein, ZINC ION 著者 Sarvan, S, Brunzelle, J.B, Couture, J.-F. 登録日 2012-04-24 公開日 2012-06-20 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure and regulon of Campylobacter jejuni ferric uptake regulator Fur define apo-Fur regulation. Proc.Natl.Acad.Sci.USA, 109, 2012
6RLB	Structure of the dynein-2 complex; tail domain 分子名称: Cytoplasmic dynein 2 light intermediate chain 1, Dynein light chain 1, cytoplasmic, ... 著者 Toropova, K, Zalyte, R, Mukhopadhyay, A.G, Mladenov, M, Carter, A.P, Roberts, A.J. 登録日 2019-05-01 公開日 2019-08-28 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structure of the dynein-2 complex and its assembly with intraflagellar transport trains. Nat.Struct.Mol.Biol., 26, 2019
8SXU	Structure of LINE-1 ORF2p with an oligo(A) template 分子名称: LINE-1 retrotransposable element ORF2 protein, RNA (25-MER) 著者 van Eeuwen, T, Taylor, M.S, Rout, M.P. 登録日 2023-05-24 公開日 2024-01-10 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.66 Å) 主引用文献 Structures, functions and adaptations of the human LINE-1 ORF2 protein. Nature, 626, 2024
5M4S	Transcription factor TFIIA as a single chain protein 分子名称: Transcription initiation factor IIA subunit 2,Transcription initiation factor IIA subunit 1,Transcription initiation factor IIA subunit 1 著者 Kandiah, E, Gupta, K. 登録日 2016-10-19 公開日 2017-11-29 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Architecture of TAF11/TAF13/TBP complex suggests novel regulation properties of general transcription factor TFIID. Elife, 6, 2017
3FMS	Crystal structure of TM0439, a GntR transcriptional regulator 分子名称: ACETATE ION, NICKEL (II) ION, Transcriptional regulator, ... 著者 Zheng, M, Cooper, D.R, Yu, M, Hung, L.-W, Derewenda, U, Derewenda, Z.S, Integrated Center for Structure and Function Innovation (ISFI) 登録日 2008-12-22 公開日 2009-02-10 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of Thermotoga maritima TM0439: implications for the mechanism of bacterial GntR transcription regulators with Zn2+-binding FCD domains. Acta Crystallogr.,Sect.D, 65, 2009
6P0F	N-terminal domain of Thermococcus Gammatolerans McrB 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMMONIUM ION, GTPase subunit of restriction endonuclease, ... 著者 Hosford, C.J, Chappie, J.S. 登録日 2019-05-17 公開日 2019-12-18 最終更新日 2020-01-29 実験手法 X-RAY DIFFRACTION (1.683 Å) 主引用文献 The structure of theThermococcus gammatoleransMcrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs. J.Biol.Chem., 295, 2020
3VOD	Crystal Structure of mutant MarR C80S from E.coli 分子名称: Multiple antibiotic resistance protein marR 著者 Lou, H, Zhu, R, Hao, Z. 登録日 2012-01-21 公開日 2013-03-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli. Nat.Chem.Biol., 10, 2014
2J4D	Cryptochrome 3 from Arabidopsis thaliana 分子名称: 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID, CRYPTOCHROME DASH, FLAVIN-ADENINE DINUCLEOTIDE 著者 Klar, T, Pokorny, R, Batschauer, A, Essen, L.-O. 登録日 2006-08-28 公開日 2007-06-19 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Cryptochrome 3 from Arabidopsis Thaliana: Structural and Functional Analysis of its Complex with a Folate Light Antenna J.Mol.Biol., 366, 2007

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