Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1P4X
DownloadVisualize
BU of 1p4x by Molmil
Crystal structure of SarS protein from Staphylococcus Aureus
分子名称: staphylococcal accessory regulator A homologue
著者Li, R, Manna, A.C, Dai, S, Cheung, A.L, Zhang, G.
登録日2003-04-24
公開日2003-07-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the SarS protein from Staphylococcus aureus
J.BACTERIOL., 185, 2003
6PB9
DownloadVisualize
BU of 6pb9 by Molmil
Crystal structure of unsaturated fatty acid bound ToxT K231A from Vibrio cholerae strain SCE256
分子名称: PALMITOLEIC ACID, Toxin co-regulated pilus virulence regulatory protein
著者Cruite, J.T, Kull, F.J.
登録日2019-06-13
公開日2020-01-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.109 Å)
主引用文献Structural basis for virulence regulation inVibrio choleraeby unsaturated fatty acid components of bile.
Commun Biol, 2, 2019
8VTT
DownloadVisualize
BU of 8vtt by Molmil
Meis1 homeobox domain bound to neomycin fragment
分子名称: Homeobox protein Meis1, RIBOSTAMYCIN, SULFATE ION
著者Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N, Sadek, H.A.
登録日2024-01-27
公開日2024-02-14
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Identification of FDA-approved drugs that induce heart regeneration in mammals.
Nat Cardiovasc Res, 3, 2024
3LGF
DownloadVisualize
BU of 3lgf by Molmil
Crystal structure of the 53BP1 tandem tudor domain in complex with p53K370me2
分子名称: DIMETHYLATED p53 Lysine 370 PEPTIDE, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Roy, S, Kutateladze, T.G.
登録日2010-01-20
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insight into p53 recognition by the 53BP1 tandem Tudor domain.
J.Mol.Biol., 398, 2010
3LGL
DownloadVisualize
BU of 3lgl by Molmil
Crystal structure of the 53BP1 tandem tudor domain in complex with p53K382me2
分子名称: DIMETHYLATED p53 LYSINE 382 PEPTIDE, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Roy, S, Kutateladze, T.G.
登録日2010-01-20
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insight into p53 recognition by the 53BP1 tandem Tudor domain.
J.Mol.Biol., 398, 2010
8VTS
DownloadVisualize
BU of 8vts by Molmil
Meis1 homeobox domain bound to paromomycin fragment
分子名称: 1,2-ETHANEDIOL, Homeobox protein Meis1, ISOPROPYL ALCOHOL, ...
著者Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N.
登録日2024-01-27
公開日2024-02-14
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Identification of FDA-approved drugs that induce heart regeneration in mammals.
Nat Cardiovasc Res, 3, 2024
4RQI
DownloadVisualize
BU of 4rqi by Molmil
Structure of TRF2/RAP1 secondary interaction binding site
分子名称: GLYCEROL, MAGNESIUM ION, Telomeric repeat-binding factor 2, ...
著者Miron, S, Guimaraes, B, Gaullier, G, Giraud-Panis, M.-J, Gilson, E, Le Du, M.-H.
登録日2014-11-03
公開日2016-02-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4405 Å)
主引用文献A higher-order entity formed by the flexible assembly of RAP1 with TRF2.
Nucleic Acids Res., 44, 2016
1DPR
DownloadVisualize
BU of 1dpr by Molmil
STRUCTURES OF THE APO-AND METAL ION ACTIVATED FORMS OF THE DIPHTHERIA TOX REPRESSOR FROM CORYNEBACTERIUM DIPHTHERIAE
分子名称: DIPHTHERIA TOX REPRESSOR
著者Schiering, N, Tao, X, Murphy, J, Petsko, G.A, Ringe, D.
登録日1995-02-06
公開日1995-09-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of the apo- and the metal ion-activated forms of the diphtheria tox repressor from Corynebacterium diphtheriae.
Proc.Natl.Acad.Sci.USA, 92, 1995
5GP9
DownloadVisualize
BU of 5gp9 by Molmil
Structural analysis of fatty acid degradation regulator FadR from Bacillus halodurans
分子名称: GLYCEROL, MAGNESIUM ION, PALMITIC ACID, ...
著者Lee, J.Y, Yeo, H.K, Park, Y.W.
登録日2016-08-01
公開日2017-03-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.755 Å)
主引用文献Structural basis of operator sites recognition and effector binding in the TetR family transcription regulator FadR.
Nucleic Acids Res., 45, 2017
6N9L
DownloadVisualize
BU of 6n9l by Molmil
Crystal structure of T. maritima UvrA d117-399 with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, UvrABC system protein A, ZINC ION
著者Hartley, S, Case, B, Osuga, M, Hingorani, M.M, Jeruzalmi, D.
登録日2018-12-03
公開日2019-05-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The ATPase mechanism of UvrA2 reveals the distinct roles of proximal and distal ATPase sites in nucleotide excision repair.
Nucleic Acids Res., 47, 2019
3TGN
DownloadVisualize
BU of 3tgn by Molmil
Crystal Structure of the zinc-dependent MarR Family Transcriptional Regulator AdcR in the Zn(II)-bound State
分子名称: Adc operon repressor AdcR, ZINC ION
著者Guerra, A.J, Dann III, C.E, Giedroc, D.P.
登録日2011-08-17
公開日2011-11-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Zinc-Dependent MarR Family Transcriptional Regulator AdcR in the Zn(II)-Bound State.
J.Am.Chem.Soc., 133, 2011
6NOO
DownloadVisualize
BU of 6noo by Molmil
Structure of Cyanothece McdA-AMPPNP complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Maintenance of carboxysome positioning A protein, ...
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
2ATL
DownloadVisualize
BU of 2atl by Molmil
Unmodified Insertion Ternary Complex
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*CP*T*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3', ...
著者Rechkoblit, O, Malinina, L, Cheng, Y, Kuryavyi, V, Broyde, S, Geacintov, N.E, Patel, D.J.
登録日2005-08-25
公開日2006-01-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion
Plos Biol., 4, 2006
5GPA
DownloadVisualize
BU of 5gpa by Molmil
Structural analysis of fatty acid degradation regulator FadR from Bacillus halodurans
分子名称: GLYCEROL, MAGNESIUM ION, Transcriptional regulator (TetR/AcrR family)
著者Lee, J.Y, Yeo, H.K, Park, Y.W.
登録日2016-08-01
公開日2017-03-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.051 Å)
主引用文献Structural basis of operator sites recognition and effector binding in the TetR family transcription regulator FadR.
Nucleic Acids Res., 45, 2017
2P52
DownloadVisualize
BU of 2p52 by Molmil
mouse p53 DNA-binding domain in zinc-free oxidized state
分子名称: Cellular tumor antigen p53
著者Kwon, E, Kim, D.Y, Suh, S.W, Kim, K.K.
登録日2007-03-14
公開日2008-01-29
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the mouse p53 core domain in zinc-free state.
Proteins, 70, 2008
1LE5
DownloadVisualize
BU of 1le5 by Molmil
Crystal structure of a NF-kB heterodimer bound to an IFNb-kB
分子名称: 5'-D(*AP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*C)-3', 5'-D(*TP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*T)-3', Nuclear factor NF-kappa-B p50 subunit, ...
著者Berkowitz, B, Huang, D.B, Chen-Park, F.E, Sigler, P.B, Ghosh, G.
登録日2002-04-09
公開日2003-04-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The X-ray crystal structure of the NF-kB p50/p65 heterodimer bound to the Interferon beta-kB site
J.Biol.Chem., 277, 2002
5AE5
DownloadVisualize
BU of 5ae5 by Molmil
Structures of inactive and activated DntR provide conclusive evidence for the mechanism of action of LysR transcription factors
分子名称: GLYCEROL, LYSR-TYPE REGULATORY PROTEIN
著者Lerche, M, Dian, C, Round, A, Lonneborg, R, Brzezinski, P, Leonard, G.A.
登録日2015-08-25
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.645 Å)
主引用文献The Solution Configurations of Inactive and Activated Dntr Have Implications for the Sliding Dimer Mechanism of Lysr Transcription Factors.
Sci.Rep., 6, 2016
1CMC
DownloadVisualize
BU of 1cmc by Molmil
THREE DIMENSIONAL CRYSTAL STRUCTURES OF E. COLI MET REPRESSOR WITH AND WITHOUT COREPRESSOR
分子名称: MAGNESIUM ION, MET REPRESSOR, S-ADENOSYLMETHIONINE
著者Somers, W.S, Phillips, S.E.V.
登録日1992-08-28
公開日1993-10-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Three-dimensional crystal structures of Escherichia coli met repressor with and without corepressor.
Nature, 341, 1989
3O0F
DownloadVisualize
BU of 3o0f by Molmil
Crystal structure of a putative metal-dependent phosphoesterase (BAD_1165) from bifidobacterium adolescentis atcc 15703 at 1.94 A resolution
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, FE (III) ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2010-07-19
公開日2010-08-25
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.
Proteins, 79, 2011
4HBL
DownloadVisualize
BU of 4hbl by Molmil
Crystal structure of AbfR of Staphylococcus epidermidis
分子名称: Transcriptional regulator, MarR family
著者Liu, X, Sun, X, Gan, J, Lan, L, Yang, C.-G.
登録日2012-09-28
公開日2013-01-02
最終更新日2013-02-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Oxidation-sensing Regulator AbfR Regulates Oxidative Stress Responses, Bacterial Aggregation, and Biofilm Formation in Staphylococcus epidermidis.
J.Biol.Chem., 288, 2013
2AU0
DownloadVisualize
BU of 2au0 by Molmil
Unmodified preinsertion binary complex
分子名称: 5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3', CALCIUM ION, ...
著者Rechkoblit, O, Malinina, L, Cheng, Y, Kuryavyi, V, Broyde, S, Geacintov, N.E, Patel, D.J.
登録日2005-08-26
公開日2006-01-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion
Plos Biol., 4, 2006
8GA8
DownloadVisualize
BU of 8ga8 by Molmil
Structure of the yeast (HDAC) Rpd3L complex
分子名称: Histone deacetylase RPD3, Transcriptional regulatory protein DEP1, Transcriptional regulatory protein PHO23, ...
著者Patel, A.B, Radhakrishnan, I, He, Y.
登録日2023-02-22
公開日2023-07-12
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of the Saccharomyces cerevisiae Rpd3L histone deacetylase complex.
Nat Commun, 14, 2023
4IF4
DownloadVisualize
BU of 4if4 by Molmil
Crystal Structure of the Magnesium and beryllofluoride-activated VraR from Staphylococcus aureus
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Response regulator protein VraR, ...
著者Leonard, P.G, Stock, A.M.
登録日2012-12-14
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Phosphorylation-dependent conformational changes and domain rearrangements in Staphylococcus aureus VraR activation.
Proc.Natl.Acad.Sci.USA, 110, 2013
1P7I
DownloadVisualize
BU of 1p7i by Molmil
CRYSTAL STRUCTURE OF ENGRAILED HOMEODOMAIN MUTANT K52A
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Segmentation polarity homeobox protein engrailed
著者Stollar, E.J, Mayor, U, Lovell, S.C, Federici, L, Freund, S.M, Fersht, A.R, Luisi, B.F.
登録日2003-05-02
公開日2003-10-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of Engrailed Homeodomain Mutants: IMPLICATIONS FOR STABILITY AND DYNAMICS
J.Biol.Chem., 278, 2003
7PZI
DownloadVisualize
BU of 7pzi by Molmil
HBc-F97L (premature secretion phenotype) in complex with Triton X-100
分子名称: Capsid protein, FRAGMENT OF TRITON X-100
著者Makbul, C, Boettcher, B.
登録日2021-10-12
公開日2021-12-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97.
Viruses, 13, 2021

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon