PDB: 178322 件ウェブページステータス検索Chemie searchBIRD

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7UWH	CryoEM Structure of E. coli Transcription-Coupled Ribonucleotide Excision Repair (TC-RER) complex bound to ribonucleotide substrate 分子名称: DNA (59-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Hao, Z.T, Grower, M, Bharati, B, Proshkin, S, Epshtein, V, Svetlov, V, Nudler, E, Shamovsky, I. 登録日 2022-05-03 公開日 2023-05-31 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 RNA polymerase drives ribonucleotide excision DNA repair in E. coli. Cell, 186, 2023
7UWE	CryoEM Structure of E. coli Transcription-Coupled Ribonucleotide Excision Repair (TC-RER) complex 分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Hao, Z.T, Grower, M, Bharati, B, Proshkin, S, Epshtein, V, Svetlov, V, Nudler, E, Shamovsky, I. 登録日 2022-05-03 公開日 2023-05-31 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 RNA polymerase drives ribonucleotide excision DNA repair in E. coli. Cell, 186, 2023
1D16	STRUCTURE OF A T4 HAIRPIN LOOP ON A Z-DNA STEM AND COMPARISON WITH A-RNA AND B-DNA LOOPS 分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*GP*TP*TP*TP*TP*CP*GP*CP*GP*CP*G)-3') 著者 Chattopadhyaya, R, Grzeskowiak, K, Dickerson, R.E. 登録日 1988-04-12 公開日 1989-01-09 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of a T4 hairpin loop on a Z-DNA stem and comparison with A-RNA and B-DNA loops. J.Mol.Biol., 211, 1990
8CXH	Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy 分子名称: Ankyrin repeat family A protein 2,Envelope E protein, C10 heavy chain, C10 light chain, ... 著者 Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H. 登録日 2022-05-21 公開日 2023-06-07 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy To Be Published
8CXI	Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy 分子名称: A11 heavy chain, A11 light chain, Ankyrin repeat family A protein 2,Envelope E protein, ... 著者 Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H. 登録日 2022-05-21 公開日 2023-06-07 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy To Be Published
8CXG	Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy 分子名称: Ankyrin repeat family A protein 2,Envelope E protein, C8 scFv heavy chain, C8 scFv light chain, ... 著者 Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H. 登録日 2022-05-21 公開日 2023-06-07 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy To Be Published
8V5S	VZV glycoprotein E C-terminal domain (cleaved) in complex with human Fab 5A2 分子名称: 5A2 Fab Heavy Chain, 5A2 Fab Light Chain, Envelope glycoprotein E 著者 Harshbarger, W, Malito, E. 登録日 2023-11-30 公開日 2024-10-09 実験手法 X-RAY DIFFRACTION (3.53 Å) 主引用文献 Structures of the Varicella Zoster Virus Glycoprotein E and Epitope Mapping of Vaccine-Elicited Antibodies Vaccines (Basel), 12, 2024
8ELL	Apo human biliverdin reductase beta (cryogenic) 分子名称: Flavin reductase (NADPH), SODIUM ION 著者 McLeod, M.J, Eisenmesser, E.Z, Lee, E, Thorne, R.E. 登録日 2022-09-26 公開日 2023-09-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Identifying structural and dynamic changes during the Biliverdin Reductase B catalytic cycle. Front Mol Biosci, 10, 2023
8ELM	Apo human biliverdin reductase beta (293K) 分子名称: Flavin reductase (NADPH), SODIUM ION 著者 McLeod, M.J, Eisenmesser, E.Z, Lee, E, Thorne, R.E. 登録日 2022-09-26 公開日 2023-09-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Identifying structural and dynamic changes during the Biliverdin Reductase B catalytic cycle. Front Mol Biosci, 10, 2023
1F1B	CRYSTAL STRUCTURE OF E. COLI ASPARTATE TRANSCARBAMOYLASE P268A MUTANT IN THE R-STATE IN THE PRESENCE OF N-PHOSPHONACETYL-L-ASPARTATE 分子名称: ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN, ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN, N-(PHOSPHONACETYL)-L-ASPARTIC ACID, ... 著者 Jin, L, Stec, B, Kantrowitz, E.R. 登録日 2000-05-18 公開日 2000-11-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A cis-proline to alanine mutant of E. coli aspartate transcarbamoylase: kinetic studies and three-dimensional crystal structures. Biochemistry, 39, 2000
7QB2	Pim1 in complex with (E)-4-((6-amino-1-methyl-2-oxoindolin-3-ylidene)methyl)benzoic acid and Pimtide 分子名称: 4-[(E)-(6-azanyl-1-methyl-2-oxidanylidene-indol-3-ylidene)methyl]benzoic acid, GLYCEROL, Pimtide, ... 著者 Hochban, P.M.M, Heine, A, Diederich, W.E. 登録日 2021-11-18 公開日 2022-11-30 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.53 Å) 主引用文献 Pose, duplicate, then elaborate: Steps towards increased affinity for inhibitors targeting the specificity surface of the Pim-1 kinase. Eur.J.Med.Chem., 245, 2023
1EZZ	CRYSTAL STRUCTURE OF E. COLI ASPARTATE TRANSCARBAMOYLASE P268A MUTANT IN THE T-STATE 分子名称: ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN, ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN, ZINC ION 著者 Jin, L, Stec, B, Kantrowitz, E.R. 登録日 2000-05-12 公開日 2000-11-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A cis-proline to alanine mutant of E. coli aspartate transcarbamoylase: kinetic studies and three-dimensional crystal structures. Biochemistry, 39, 2000
6NCU	Interleukin-37 residues 53-206- dimer 分子名称: Interleukin-37 著者 Eisenmesser, E.Z. 登録日 2018-12-12 公開日 2019-03-13 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Interleukin-37 monomer is the active form for reducing innate immunity. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
4HR7	Crystal Structure of Biotin Carboxyl Carrier Protein-Biotin Carboxylase Complex from E.coli 分子名称: 1,2-ETHANEDIOL, Biotin carboxyl carrier protein of acetyl-CoA carboxylase, Biotin carboxylase, ... 著者 Broussard, T.C, Kobe, M.J, Pakhomova, S, Neau, D.B, Price, A.E, Champion, T.S, Waldrop, G.L. 登録日 2012-10-26 公開日 2013-03-13 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.495 Å) 主引用文献 The three-dimensional structure of the biotin carboxylase-biotin carboxyl carrier protein complex of E. coli acetyl-CoA carboxylase. Structure, 21, 2013
3TTQ	Crystal structure of Leuconostoc mesenteroides NRRL B-1299 N-terminally truncated dextransucrase DSR-E in orthorhombic apo-form at 1.9 angstrom resolution 分子名称: CALCIUM ION, Dextransucrase, GLYCEROL, ... 著者 Brison, Y, Pijning, T, Fabre, E, Mourey, L, Morel, S, Potocki-Veronese, G, Monsan, P, Remaud-Simeon, M, Dijkstra, B.W, Tranier, S. 登録日 2011-09-15 公開日 2012-01-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Functional and structural characterization of alpha-(1-2) branching sucrase derived from DSR-E glucansucrase J.Biol.Chem., 287, 2012
4XPU	The crystal structure of EndoV from E.coli 分子名称: Endonuclease V 著者 Xie, W, Zhang, Z. 登録日 2015-01-18 公開日 2015-08-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of E. coli endonuclease V, an essential enzyme for deamination repair Sci Rep, 5, 2015
5IFG	Crystal structure of HigA-HigB complex from E. Coli 分子名称: Antitoxin HigA, mRNA interferase HigB 著者 Yang, J.S, Zhou, K, Gao, z.Q, Liu, Q.S, Dong, Y.H. 登録日 2016-02-26 公開日 2017-03-01 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.702 Å) 主引用文献 Structural insight into the E. coli HigBA complex Biochem. Biophys. Res. Commun., 478, 2016
6HPB	Crystal structure of the E.coli HicAB toxin-antitoxin complex 分子名称: Antitoxin HicB, SULFATE ION, mRNA interferase toxin HicA 著者 Manav, M.C, Brodersen, D.E. 登録日 2018-09-20 公開日 2019-09-18 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain. Structure, 27, 2019
1DN8	STRUCTURE OF A Z-DNA WITH TWO DIFFERENT BACKBONE CHAIN CONFORMATIONS. STABILIZATION OF THE DECADEOXYOLIGONUCLEOTIDE D(CGTACGTACG) BY (CO(NH3)6)3+ BINDING TO THE GUANINE 分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*P*CP*GP*TP*AP*CP*GP*TP*AP*CP*G)-3') 著者 Brennan, R.G, Westhof, E, Sundaralingam, M. 登録日 1987-05-12 公開日 1988-04-16 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of a Z-DNA with two different backbone chain conformations. Stabilization of the decadeoxyoligonucleotide d(CGTACGTACG) by [Co(NH3)6]3+ binding to the guanine. J.Biomol.Struct.Dyn., 3, 1986
7ZQM	d(CGCGCG)2 Z-DNA AT 3000 BARS (300 MPa) 分子名称: MAGNESIUM ION, Z-DNA (5'-D(*CP*GP*CP*GP*CP*G)-3') 著者 Prange, T, Colloc'h, N, Girard, E. 登録日 2022-05-01 公開日 2023-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.41 Å) 主引用文献 Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure Crystals, 2022
4ZSW	Pig Brain GABA-AT inactivated by (E)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic acid 分子名称: (1S)-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]cyclopent-3-ene-1,3-dicarboxylic acid, 4-aminobutyrate aminotransferase, mitochondrial, ... 著者 Wu, R, Lee, H, Le, H.V, Doud, E, Sanishvili, R, Compton, P, Kelleher, N.L, Silverman, R.B, Liu, D. 登録日 2015-05-14 公開日 2015-07-08 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Mechanism of Inactivation of GABA Aminotransferase by (E)- and (Z)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic Acid. Acs Chem.Biol., 10, 2015
5JOQ	Crystal Structure of an ABC Transporter Substrate-Binding Protein from Listeria monocytogenes EGD-e 分子名称: CHLORIDE ION, CITRIC ACID, Lmo2184 protein 著者 Brunzelle, J.S, Wawrzak, Z, Kudritska, M, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2016-05-02 公開日 2016-07-27 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Crystal Structure of an ABC Transporter Substrate-Binding Protein from Listeria monocytogenes EGD-e To Be Published
7X7R	Cryo-EM structure of a bacterial protein 分子名称: RAMP superfamily protein, RNA (36-MER), RNA (5'-R(P*AP*GP*UP*CP*CP*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*G)-3'), ... 著者 Yu, G, Wang, X, Deng, Z, Zhang, H. 登録日 2022-03-10 公開日 2022-11-16 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex. Nat Microbiol, 7, 2022
7X8A	Cryo-EM structure of a bacterial protein complex 分子名称: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ... 著者 Yu, G, Wang, X, Deng, Z, Zhang, H. 登録日 2022-03-11 公開日 2022-11-16 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex. Nat Microbiol, 7, 2022
7XC7	Cryo-EM structure of a bacterial protein complex 分子名称: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ... 著者 Yu, G, Wang, X, Deng, Z, Zhang, H. 登録日 2022-03-23 公開日 2022-11-16 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure and function of a bacterial type III-E CRISPR-Cas7-11 complex. Nat Microbiol, 7, 2022

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