Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8PRI
DownloadVisualize
BU of 8pri by Molmil
The structure of nvBagel9
分子名称: Cell surface protein
著者Vandebroek, L, Voet, A.R.D, Lee, X.Y.
登録日2023-07-12
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of v13Bagel2
To Be Published
7ONQ
DownloadVisualize
BU of 7onq by Molmil
Carbonic anhydrase II mutant (E69C) dually binding an IrCp* complex to generate an artificial transfer hydrogenase (ATHase)
分子名称: 1,2-ETHANEDIOL, 4-[2-(4-azanyl-9-chloranyl-2',3',4',5',6'-pentamethyl-7-oxidanylidene-spiro[1$l^{4},8-diaza-9$l^{8}-iridabicyclo[4.3.0]nona-1,3,5-triene-9,1'-1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane]-8-yl)ethyl]benzenesulfonamide, Carbonic anhydrase 2, ...
著者Stein, A, Dongping, C, Cotelle, Y, Rebelein, J.G, Ward, T.R.
登録日2021-05-25
公開日2021-12-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A Dual Anchoring Strategy for the Directed Evolution of Improved Artificial Transfer Hydrogenases Based on Carbonic Anhydrase.
Acs Cent.Sci., 7, 2021
6XXF
DownloadVisualize
BU of 6xxf by Molmil
1.7 Angstrom crystal structure of Ca/CaM:RyR2 peptide complex
分子名称: CALCIUM ION, Calmodulin-2, RyR2 Peptide
著者Antonyuk, S, Helassa, N.
登録日2020-01-27
公開日2021-02-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献CPVT-associated calmodulin variants N53I and A102V dysregulate Ca2+ signalling via different mechanisms.
J.Cell.Sci., 135, 2022
6I2S
DownloadVisualize
BU of 6i2s by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD (R802A) in complex with GarA, following 2-oxoglutarate soak
分子名称: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid, CALCIUM ION, Glycogen accumulation regulator GarA, ...
著者Wagner, T, Bellinzoni, M, Alzari, P.M.
登録日2018-11-01
公開日2019-05-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into the functional versatility of an FHA domain protein in mycobacterial signaling.
Sci.Signal., 12, 2019
6AXT
DownloadVisualize
BU of 6axt by Molmil
Structure of the T58S/T107I/P122A mutant of the HIV-1 capsid protein
分子名称: CHLORIDE ION, HIV-1 capsid protein, IODIDE ION
著者Gres, A.T, Kirby, K.A, Sarafianos, S.G.
登録日2017-09-07
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of a novel element in HIV-1 capsid critical for assembly and maturation
To be published
5T91
DownloadVisualize
BU of 5t91 by Molmil
Crystal structure of B. subtilis 168 GlpQ in complex with bicine
分子名称: BICINE, CALCIUM ION, Glycerophosphoryl diester phosphodiesterase, ...
著者Li, F.K.K, Strynadka, N.C.J.
登録日2016-09-09
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component.
J. Biol. Chem., 291, 2016
7ONV
DownloadVisualize
BU of 7onv by Molmil
Carbonic anhydrase II mutant (I91C) dually binding an IrCp* complex to generate an artificial transfer hydrogenase (ATHase)
分子名称: 1,2-ETHANEDIOL, 4-[2-(4-azanyl-9-chloranyl-2',3',4',5',6'-pentamethyl-7-oxidanylidene-spiro[1$l^{4},8-diaza-9$l^{8}-iridabicyclo[4.3.0]nona-1,3,5-triene-9,1'-1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane]-8-yl)ethyl]benzenesulfonamide, Carbonic anhydrase 2, ...
著者Stein, A, Dongping, C, Cotelle, Y, Rebelein, J.G, Ward, T.R.
登録日2021-05-26
公開日2021-12-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献A Dual Anchoring Strategy for the Directed Evolution of Improved Artificial Transfer Hydrogenases Based on Carbonic Anhydrase.
Acs Cent.Sci., 7, 2021
7KBZ
DownloadVisualize
BU of 7kbz by Molmil
Artificial Metalloproteins with Dinuclear Iron Centers
分子名称: CYANIDE ION, Streptavidin, {N-(4-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}butyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}iron(3+)
著者Miller, K.R, Follmer, A.H, Jasniewski, A.J, Sabuncu, S, Biswas, S, Albert, T, Hendrich, M.P, Moenne-Loccoz, P, Borovik, A.S.
登録日2020-10-03
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers.
J.Am.Chem.Soc., 143, 2021
6PC9
DownloadVisualize
BU of 6pc9 by Molmil
Crystal Structure of EcDsbA in a complex with purified methylpiperazinone 6
分子名称: 2-methyl-4-{4-[2-(4-methyl-3-oxopiperazin-1-yl)-2-oxoethyl]phenoxy}benzonitrile, TRIETHYLENE GLYCOL, Thiol:disulfide interchange protein DsbA
著者Ilyichova, O.V, Bentley, M, Doak, B, Scanlon, M.J.
登録日2019-06-17
公開日2020-05-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Rapid Elaboration of Fragments into Leads by X-ray Crystallographic Screening of Parallel Chemical Libraries (REFiLX).
J.Med.Chem., 63, 2020
6I1S
DownloadVisualize
BU of 6i1s by Molmil
Crystal structure of the ACVR1 (ALK2) kinase in complex with FKBP12 and the inhibitor E6201
分子名称: (4~{S},5~{R},6~{Z},9~{S},10~{S},12~{E})-16-(ethylamino)-4,5-dimethyl-9,10,18-tris(oxidanyl)-3-oxabicyclo[12.4.0]octadeca-1(14),6,12,15,17-pentaene-2,8-dione, 1,2-ETHANEDIOL, Activin receptor type-1, ...
著者Williams, E.P, Pinkas, D.M, Fortin, J, Newman, J.A, Bradshaw, W.J, Mahajan, P, Kupinska, K, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
登録日2018-10-30
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Mutant ACVR1 Arrests Glial Cell Differentiation to Drive Tumorigenesis in Pediatric Gliomas.
Cancer Cell, 37, 2020
6XZJ
DownloadVisualize
BU of 6xzj by Molmil
Structure of zVDR LBD-Calcitriol in complex with chimera 12
分子名称: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL, ACETATE ION, ARG-HIS-LYS-ILE-LEU-URR-UIL-URL-GLN, ...
著者Buratto, J, Belorusova, A.Y, Rochel, N, Guichard, G.
登録日2020-02-04
公開日2021-02-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for alpha-Helix Mimicry and Inhibition of Protein-Protein Interactions with Oligourea Foldamers.
Angew.Chem.Int.Ed.Engl., 60, 2021
6I37
DownloadVisualize
BU of 6i37 by Molmil
Crystal structure of nv1Pizza6-AYW, a circularly permuted designer protein
分子名称: SULFATE ION, nv1Pizza6-AYW
著者Mylemans, B, Noguchi, H, Deridder, E, Voet, A.R.D.
登録日2018-11-05
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Influence of circular permutations on the structure and stability of a six-fold circular symmetric designer protein.
Protein Sci., 2020
6ECI
DownloadVisualize
BU of 6eci by Molmil
Structure of the FAD binding protein MSMEG_5243 from Mycobacterium smegmatis
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Pyridoxamine 5'-phosphate oxidase-related, ...
著者Ahmed, F.H, Antoney, J, Carr, P.D, Jackson, C.J.
登録日2018-08-07
公開日2018-12-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献FAD-sequestering proteins protect mycobacteria against hypoxic and oxidative stress.
J. Biol. Chem., 294, 2019
6I39
DownloadVisualize
BU of 6i39 by Molmil
Crystal structure of v31Pizza6-AYW, a circularly permuted designer protein
分子名称: MAGNESIUM ION, v31Pizza6-AYW
著者Mylemans, B, Noguchi, H, Deridder, E, Voet, A.R.D.
登録日2018-11-05
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Influence of circular permutations on the structure and stability of a six-fold circular symmetric designer protein.
Protein Sci., 2020
6XQL
DownloadVisualize
BU of 6xql by Molmil
Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with cellohexaose, presenting a 1,3-beta-D-cellobiosyl-glucose at active site
分子名称: CALCIUM ION, GH16 family protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose
著者Liberato, M.V, Squina, F.
登録日2020-07-09
公開日2021-02-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds.
J.Biol.Chem., 296, 2021
5T9T
DownloadVisualize
BU of 5t9t by Molmil
Protocadherin Gamma B2 extracellular cadherin domains 1-5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Protocadherin gamma B2-alpha C, ...
著者Goodman, K.M, Mannepalli, S, Bahna, F, Honig, B, Shapiro, L.
登録日2016-09-09
公開日2016-10-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献gamma-Protocadherin structural diversity and functional implications.
Elife, 5, 2016
6PCW
DownloadVisualize
BU of 6pcw by Molmil
Human PIM1 bound to benzothiophene inhibitor 213
分子名称: 4-[5-(cyclopropylcarbamoyl)thiophen-2-yl]-1-benzothiophene-2-carboxamide, GLYCEROL, Peptide, ...
著者Godoi, P.H.C, Santiago, A.S, Fala, A.M, Ramos, P.Z, Sriranganadane, D, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
登録日2019-06-18
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献PIM1 bound to benzothiophene inhibitor
To Be Published
5ENN
DownloadVisualize
BU of 5enn by Molmil
The crystal structure of Human VPS34 in complex with a selective and potent inhibitor
分子名称: 1-[[4-(cyclopropylmethyl)-5-[2-(pyridin-4-ylamino)pyrimidin-4-yl]pyrimidin-2-yl]amino]-2-methyl-propan-2-ol, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3, ...
著者Kearney, E.P.
登録日2015-11-09
公開日2016-11-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Potent, selective, and orally bioavailable inhibitors of VPS34 provide chemical tools to modulate autophagy in vivo
To Be Published
6AY9
DownloadVisualize
BU of 6ay9 by Molmil
Structure of the native full-length HIV-1 capsid protein in complex with CPSF6 peptide
分子名称: CHLORIDE ION, Cleavage and polyadenylation specificity factor subunit 6, HIV-1 capsid protein, ...
著者Gres, A.T, Kirby, K.A, Sarafianos, S.G.
登録日2017-09-07
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Multidisciplinary studies with mutated HIV-1 capsid proteins reveal structural mechanisms of lattice stabilization.
Nat Commun, 14, 2023
6XYJ
DownloadVisualize
BU of 6xyj by Molmil
Hfq from E.coli with inserted long loop L4 sequence
分子名称: RNA-binding protein Hfq
著者Nikulin, A.D, Alipov, A.A, Lekontseva, N.V.
登録日2020-01-30
公開日2021-02-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.772 Å)
主引用文献Structure of a Mutant Form of Translation Regulator Hfq with the Extended Loop L4
Crystallography Reports, 66, 2021
8PGM
DownloadVisualize
BU of 8pgm by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 3062
分子名称: 3-[4-[(azanyl-methyl-oxidanyl-$l^{4}-sulfanyl)methyl]-3-fluoranyl-phenyl]-7-propan-2-yl-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, DIMETHYL SULFOXIDE, ...
著者Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
登録日2023-06-18
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Crystal structure of the metallo-beta-lactamase VIM1 with 3062
To Be Published
5T7T
DownloadVisualize
BU of 5t7t by Molmil
Galectin-8 N terminal domain in complex with LNT
分子名称: CHLORIDE ION, Galectin-8, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Bohari, M.H, Yu, X, Blanchard, H.
登録日2016-09-05
公開日2017-01-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structure-based rationale for differential recognition of lacto- and neolacto- series glycosphingolipids by the N-terminal domain of human galectin-8.
Sci Rep, 6, 2016
5EO2
DownloadVisualize
BU of 5eo2 by Molmil
Structural and biochemical characterization of the hypothetical protein SAV2348 from Staphylococcus aureus in complex with CoA.
分子名称: COENZYME A, thioesterase
著者Khandokar, Y.B, Srivastava, P, Forwood, J.K.
登録日2015-11-10
公開日2016-02-03
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and biochemical characterization of the hypothetical protein SAV2348 from Staphylococcus aureus in complex with CoA
To Be Published
6XZF
DownloadVisualize
BU of 6xzf by Molmil
Nanobody in complex with eGFP
分子名称: Nanobody targeted against eGFP, TERBIUM(III) ION, eGFP
著者Pompidor, G, Zimmermann, S, Loew, C, Schneider, T.
登録日2020-02-04
公開日2021-02-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Engineered nanobodies with a lanthanide binding motif for crystallographic phasing
To Be Published
6I3I
DownloadVisualize
BU of 6i3i by Molmil
Crystal structure of reactive center loop (RCL) cleaved angiotensinogen
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensinogen
著者Yan, Y, Read, R.J.
登録日2018-11-06
公開日2018-12-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Structural basis for the specificity of renin-mediated angiotensinogen cleavage.
J. Biol. Chem., 294, 2019

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon