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6J9E
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BU of 6j9e by Molmil
Cryo-EM structure of Xanthomonos oryzae transcription elongation complex with NusA and the bacteriophage protein P7
分子名称: 45L, DNA (29-MER), DNA-directed RNA polymerase subunit alpha, ...
著者You, L.L, Zhang, Y.
登録日2019-01-22
公開日2019-07-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Structural basis for transcription antitermination at bacterial intrinsic terminator.
Nat Commun, 10, 2019
5YIX
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BU of 5yix by Molmil
Caulobacter crescentus GcrA sigma-interacting domain (SID) in complex with domain 2 of sigma 70
分子名称: (R,R)-2,3-BUTANEDIOL, Cell cycle regulatory protein GcrA, RNA polymerase sigma factor RpoD, ...
著者Wu, X, Zhang, Y.
登録日2017-10-06
公開日2018-03-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA.
Nucleic Acids Res., 46, 2018
3MXN
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BU of 3mxn by Molmil
Crystal structure of the RMI core complex
分子名称: BENZAMIDINE, RecQ-mediated genome instability protein 1, RecQ-mediated genome instability protein 2
著者Hoadley, K.A, Xu, D, Xue, Y, Satyshur, K.A, Wang, W, Keck, J.L.
登録日2010-05-07
公開日2010-09-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure and cellular roles of the RMI core complex from the bloom syndrome dissolvasome.
Structure, 18, 2010
2HZA
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BU of 2hza by Molmil
Nickel-bound full-length Escherichia coli NikR
分子名称: 3-CYCLOHEXYLPROPYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE, NICKEL (II) ION, Nickel-responsive regulator
著者Schreiter, E.R, Drennan, C.L.
登録日2006-08-08
公開日2006-08-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献NikR-operator complex structure and the mechanism of repressor activation by metal ions.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2CPG
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BU of 2cpg by Molmil
TRANSCRIPTIONAL REPRESSOR COPG
分子名称: CHLORIDE ION, TRANSCRIPTIONAL REPRESSOR COPG
著者Gomis-Rueth, F.X, Sola, M, Acebo, P, Parraga, A, Guasch, A, Eritja, R, Gonzalez, A, Espinosa, M, del Solar, G, Coll, M.
登録日1999-11-15
公開日1999-11-19
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator.
EMBO J., 17, 1998
6NIF
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BU of 6nif by Molmil
crystal structure of human REV7-RAN complex
分子名称: hREV7, GTP-binding nuclear protein Ran, hREV3 fusion
著者Wang, X, Pertz, L, Hua, D.P, Zhang, T.Q, Listovsky, T, Xie, W.
登録日2018-12-27
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献REV7 has a dynamic adaptor region to accommodate small GTPase RAN/ShigellaIpaB ligands, and its activity is regulated by the RanGTP/GDP switch.
J.Biol.Chem., 294, 2019
3DNU
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BU of 3dnu by Molmil
structure of MDT protein
分子名称: CHLORIDE ION, PHOSPHATE ION, Protein hipA
著者schumacher, M.A.
登録日2008-07-02
公開日2009-01-27
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB.
Science, 323, 2009
3ECH
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BU of 3ech by Molmil
The MarR-family repressor MexR in complex with its antirepressor ArmR
分子名称: 25-mer fragment of protein ArmR, Multidrug resistance operon repressor
著者Wilke, M.S, Strynadka, N.C.J.
登録日2008-08-30
公開日2008-10-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献The crystal structure of MexR from Pseudomonas aeruginosa in complex with its antirepressor ArmR
Proc.Natl.Acad.Sci.Usa, 105, 2008
2QQF
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BU of 2qqf by Molmil
Hst2 bound to ADP-HPD and Acetylated histone H4
分子名称: 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE, Histone H4, NAD-dependent deacetylase HST2, ...
著者Marmorstein, R, Sanders, B.D, Zhao, K, Slama, J.
登録日2007-07-26
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for nicotinamide inhibition and base exchange in sir2 enzymes.
Mol.Cell, 25, 2007
8D79
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BU of 8d79 by Molmil
Crystal structure of a four-tetrad, parallel, and Na+ stabilized Tetrahymena thermophila telomeric G-quadruplex in complex with N-methyl mesoporphyrin IX
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*T)-3'), N-METHYLMESOPORPHYRIN, ...
著者Chen, E.V, Beseiso, D, Yatsunyk, L.A.
登録日2022-06-07
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Biophysical and structural characterization of telomeric G-quadruplexes from Tetrahymena thermophila in complex with N-Methyl Mesoporphyrin IX
To Be Published
8W9C
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BU of 8w9c by Molmil
Cryo-EM structure of the Rpd3S complex from budding yeast
分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, POTASSIUM ION, ...
著者Wang, C, Zhan, X.
登録日2023-09-05
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structures and dynamics of Rpd3S complex bound to nucleosome.
Sci Adv, 10, 2024
4G8X
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BU of 4g8x by Molmil
G1 ORF67 / Staphyloccus aureus sigmaA domain 4 complex
分子名称: ORF067, RNA polymerase sigma factor rpoD
著者Darst, S.A, Osmundson, J.S, Montero-Diaz, C.M, Hochschild, A.
登録日2012-07-23
公開日2013-08-07
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献Promoter-specific transcription inhibition in Staphylococcus aureus by a phage protein.
Cell(Cambridge,Mass.), 151, 2012
4G6D
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BU of 4g6d by Molmil
G1 ORF67 / Staphyloccus aureus sigmaA domain 4 complex
分子名称: ORF067, RNA polymerase sigma factor rpoD
著者Darst, S.A, Osmundson, J.S.
登録日2012-07-18
公開日2013-01-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9971 Å)
主引用文献Promoter-specific transcription inhibition in Staphylococcus aureus by a phage protein.
Cell(Cambridge,Mass.), 151, 2012
4G94
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BU of 4g94 by Molmil
G1 ORF67 / Staphyloccus aureus sigmaA domain 4 complex
分子名称: ORF067, RNA polymerase sigma factor rpoD
著者Darst, S.A, Osmundson, J.S, Montero-Diaz, C.M, Hochschild, A.
登録日2012-07-23
公開日2013-01-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9971 Å)
主引用文献Promoter-specific transcription inhibition in Staphylococcus aureus by a phage protein.
Cell(Cambridge,Mass.), 151, 2012
2XDN
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BU of 2xdn by Molmil
Transcription factor TtgR H67A mutant
分子名称: HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR
著者Daniels, C, Lu, D, Zhang, X, Ramos, J.L.
登録日2010-05-04
公開日2010-05-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Domain Cross-Talk During Effector Binding to the Multidrug Binding Ttgr Regulator.
J.Biol.Chem., 285, 2010
4YG7
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BU of 4yg7 by Molmil
Structure of FL autorepression promoter complex
分子名称: Antitoxin HipB, DNA (50-MER), Serine/threonine-protein kinase HipA
著者Schumacher, M.A.
登録日2015-02-25
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.77 Å)
主引用文献HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
4J2X
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BU of 4j2x by Molmil
CSL (RBP-Jk) with corepressor KyoT2 bound to DNA
分子名称: 1,2-ETHANEDIOL, 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3', 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3', ...
著者Collins, K.J, Kovall, R.A.
登録日2013-02-05
公開日2013-11-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure and Function of the CSL-KyoT2 Corepressor Complex: A Negative Regulator of Notch Signaling.
Structure, 22, 2014
2FE3
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BU of 2fe3 by Molmil
The crystal structure of bacillus subtilis PerR-Zn reveals a novel Zn(Cys)4 Structural redox switch
分子名称: Peroxide operon regulator, ZINC ION
著者Traore, D.A.K.
登録日2005-12-15
公開日2006-12-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the apo-PerR-Zn protein from Bacillus subtilis.
Mol.Microbiol., 61, 2006
7A1F
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BU of 7a1f by Molmil
Crystal structure of human 5' exonuclease Appollo in complex with 5'dAMP
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, 5' exonuclease Apollo, FE (III) ION, ...
著者Newman, J.A, Baddock, H.T, Mukhopadhyay, S.M.M, Burgess-Brown, N.A, von Delft, F, Arrowshmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
登録日2020-08-12
公開日2021-01-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A phosphate binding pocket is a key determinant of exo- versus endo-nucleolytic activity in the SNM1 nuclease family.
Nucleic Acids Res., 49, 2021
3BKF
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BU of 3bkf by Molmil
Zinc-bound C-terminal Domain of NikR
分子名称: Nickel-responsive regulator, ZINC ION
著者Phillips, C.M, Schreiter, E.R, Drennan, C.L.
登録日2007-12-06
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis of the Metal Specificity for Nickel Regulatory Protein NikR.
Biochemistry, 47, 2008
7A5F
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BU of 7a5f by Molmil
Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
著者Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
登録日2020-08-21
公開日2020-12-23
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
8DQ0
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BU of 8dq0 by Molmil
Quorum-sensing receptor RhlR bound to PqsE
分子名称: 2-aminobenzoylacetyl-CoA thioesterase, 4-(3-bromophenoxy)-N-[(3S)-2-oxothiolan-3-yl]butanamide, RhlR protein
著者Paczkowski, J.E, Fromme, J.C, Feathers, J.R.
登録日2022-07-18
公開日2022-12-07
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structure of the RhlR-PqsE complex from Pseudomonas aeruginosa reveals mechanistic insights into quorum-sensing gene regulation.
Structure, 30, 2022
4M6B
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BU of 4m6b by Molmil
Crystal structure of yeast Swr1-Z domain in complex with H2A.Z-H2B dimer
分子名称: Chimera protein of Histone H2B.1 and Histone H2A.Z, Helicase SWR1
著者Hong, J.J, Feng, H.Q, Wang, F, Ranjan, A, Chen, J.H, Jiang, J.S, Girlando, R, Xiao, T.S, Wu, C, Bai, Y.W.
登録日2013-08-09
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献The Catalytic Subunit of the SWR1 Remodeler Is a Histone Chaperone for the H2A.Z-H2B Dimer.
Mol.Cell, 53, 2014
3VPR
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BU of 3vpr by Molmil
Crystal Structure of a TetR Family Transcriptional Regulator PfmR from Thermus thermophilus HB8
分子名称: Transcriptional regulator, TetR family
著者Agari, Y, Sakamoto, K, Kuramitsu, S, Shinkai, A.
登録日2012-03-12
公開日2012-07-11
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Transcriptional repression mediated by a TetR family protein, PfmR, from Thermus thermophilus HB8
J.Bacteriol., 2012
7B5G
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BU of 7b5g by Molmil
Crystal structure of E.coli LexA in complex with nanobody NbSOS3(Nb14527)
分子名称: 1,2-ETHANEDIOL, LexA repressor, Nanobody Nb14527, ...
著者Maso, L, Vascon, F, Chinellato, M, Pardon, E, Steyaert, J, Angelini, A, Tondi, D, Cendron, L.
登録日2020-12-03
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Nanobodies targeting LexA autocleavage disclose a novel suppression strategy of SOS-response pathway.
Structure, 30, 2022

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