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8CPB
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1,6-anhydro-n-actetylmuramic acid kinase (AnmK) in complex with AMPPNP, and AnhMurNAc at 1.7 Angstroms resolution.
分子名称: 2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID, Anhydro-N-acetylmuramic acid kinase, GLYCEROL, ...
著者Jimenez-Faraco, E, Hermoso, J.A.
登録日2023-03-02
公開日2023-09-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Catalytic process of anhydro-N-acetylmuramic acid kinase from Pseudomonas aeruginosa.
J.Biol.Chem., 299, 2023
5UTO
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BU of 5uto by Molmil
The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with palmitic acid to 1.83 Angstrom resolution
分子名称: EDD domain protein, DegV family, PALMITIC ACID
著者Cuypers, M.G, Ericson, M, Subramanian, C, Broussard, T.C, Miller, D.J, White, S.W, Rock, C.O.
登録日2017-02-15
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with palmitic acid to 1.83 Angstroem resolution
J.Biol.Chem., 2018
6NDJ
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BU of 6ndj by Molmil
Crystal structure of human NLRP6 PYD domain with MBP fusion
分子名称: Maltose/maltodextrin-binding periplasmic protein, NACHT, LRR and PYD domains-containing protein 6 chimera
著者Shen, C, Fu, T.M, Wu, H.
登録日2018-12-13
公開日2019-01-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Molecular mechanism for NLRP6 inflammasome assembly and activation.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
8CHJ
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Human FKBP12 in complex with (1S,5S,6R)-10-((R)-(3,5-dichlorophenyl)sulfonimidoyl)-3-(pyridin-2-ylmethyl)-5-vinyl-3,10-diazabicyclo[4.3.1]decan-2-one
分子名称: (1S,5S,6R)-10-[[3,5-bis(chloranyl)phenyl]sulfonimidoyl]-5-ethenyl-3-(pyridin-2-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-2-one, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Meyners, C, Purder, P.L, Hausch, F.
登録日2023-02-08
公開日2023-09-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献Deconstructing Protein Binding of Sulfonamides and Sulfonamide Analogues.
Jacs Au, 3, 2023
6NMM
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Ternary complex structure of the T130K mutant of ANT-4 with Neomycin, AMPCPP and Pyrophosphate
分子名称: ADENOSINE MONOPHOSPHATE, Kanamycin nucleotidyltransferase, MAGNESIUM ION, ...
著者Cuneo, M.J, Selvaraj, B.
登録日2019-01-11
公開日2020-01-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献'Catch and Release": a Variation of the Archetypal Nucleotidyl Transfer Reaction
Acs Catalysis, 2020
7OC8
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BU of 7oc8 by Molmil
Trichoderma reesei Cel7A E212Q mutant in complex with pNPL
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COBALT (II) ION, Exoglucanase 1, ...
著者Haataja, T, Sandgren, M, Stahlberg, J.
登録日2021-04-26
公開日2022-03-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Enzyme kinetics by GH7 cellobiohydrolases on chromogenic substrates is dictated by non-productive binding: insights from crystal structures and MD simulation.
Febs J., 290, 2023
7W65
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BU of 7w65 by Molmil
Crystal structure of minor pilin TcpB from Vibrio cholerae complexed with secreted protein TcpF
分子名称: Toxin coregulated pilus biosynthesis protein F, Toxin-coregulated pilus biosynthesis protein B
著者Oki, H, Kawahara, K, Iimori, M, Imoto, Y, Maruno, T, Uchiyama, S, Muroga, Y, Yoshida, A, Yoshida, T, Ohkubo, T, Matsuda, S, Iida, T, Nakamura, S.
登録日2021-12-01
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (4.05 Å)
主引用文献Structural basis for the toxin-coregulated pilus-dependent secretion of Vibrio cholerae colonization factor.
Sci Adv, 8, 2022
6NN1
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Xanthomonas citri PGM Apo-Dephospho
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, PHOSPHATE ION, ...
著者Stiers, K.M, Beamer, L.J.
登録日2019-01-14
公開日2019-04-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and dynamical description of the enzymatic reaction of a phosphohexomutase.
Struct Dyn., 6, 2019
5LVT
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BU of 5lvt by Molmil
Structure of HU protein from Lactococcus lactis
分子名称: ACETATE ION, DNA-binding protein HU, SULFATE ION
著者Le Meur, R, Coste, F, Castaing, B.
登録日2016-09-14
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of HU protein from Lactococcus lactis
To Be Published
8CP9
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1,6-anhydro-n-actetylmuramic acid kinase (AnmK)in complex with non-hydrolyzable AMPPNP.
分子名称: Anhydro-N-acetylmuramic acid kinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Jimenez-Faraco, E, Hermoso, J.A.
登録日2023-03-02
公開日2023-09-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Catalytic process of anhydro-N-acetylmuramic acid kinase from Pseudomonas aeruginosa.
J.Biol.Chem., 299, 2023
7OHN
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BU of 7ohn by Molmil
SaFtsZ complexed with GDP, AlF4- and Mg2+
分子名称: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Fernandez-Tornero, C, Ruiz, F.M, Andreu, J.M.
登録日2021-05-11
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献FtsZ filament structures in different nucleotide states reveal the mechanism of assembly dynamics.
Plos Biol., 20, 2022
5FNO
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Manganese Lipoxygenase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MANGANESE (II) ION, ...
著者Wennman, A, Karkehabadi, S, Oliw, E.H, Chen, Y.
登録日2015-11-16
公開日2016-01-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.038 Å)
主引用文献Crystal Structure of Manganese Lipoxygenase of the Rice Blast Fungus Magnaporthe Oryzae
J.Biol.Chem., 291, 2016
8PEI
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BU of 8pei by Molmil
Crystal structure of the biphotochromic fluorescent protein SAASoti (C21N/V127T variant) in its green on-state
分子名称: C21N/V127T form of the biphotochromic fluorescent protein SAASoti
著者Boyko, K.M, Varfolomeeva, L.A, Matyuta, I.O, Gavshina, A.V, Solovyev, I.D, Popov, V.O, Savitsky, A.P.
登録日2023-06-14
公開日2024-01-17
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The role of the correlated motion(s) of the chromophore in photoswitching of green and red forms of the photoconvertible fluorescent protein mSAASoti.
Sci Rep, 14, 2024
7W63
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BU of 7w63 by Molmil
Crystal structure of minor pilin TcpB from Vibrio cholerae
分子名称: SULFATE ION, Toxin-coregulated pilus biosynthesis protein B
著者Oki, H, Kawahara, K, Iimori, M, Imoto, Y, Maruno, T, Uchiyama, S, Muroga, Y, Yoshida, A, Yoshida, T, Ohkubo, T, Matsuda, S, Iida, T, Nakamura, S.
登録日2021-12-01
公開日2022-11-09
最終更新日2022-11-16
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural basis for the toxin-coregulated pilus-dependent secretion of Vibrio cholerae colonization factor.
Sci Adv, 8, 2022
5FOB
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Crystal Structure of Human Complement C3b in complex with Smallpox Inhibitor of Complement (SPICE)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, COMPLEMENT C3 BETA CHAIN, ...
著者Forneris, F, Wu, J, Xue, X, Gros, P.
登録日2015-11-18
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Regulators of Complement Activity Mediate Inhibitory Mechanisms Through a Common C3B-Binding Mode.
Embo J., 35, 2016
8C3U
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BU of 8c3u by Molmil
Crystal Structure of human IL-1beta in complex with a low molecular weight antagonist
分子名称: (S)-4'-hydroxy-3'-(6-methyl-2-oxo-3-(1H-pyrazol-4-yl)indolin-3-yl)-[1,1'-biphenyl]-2,4-dicarboxylic acid, Interleukin-1 beta
著者Rondeau, J.-M, Lehmann, S, Koch, E.
登録日2022-12-28
公開日2023-09-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.945 Å)
主引用文献Discovery of a selective and biologically active low-molecular weight antagonist of human interleukin-1 beta.
Nat Commun, 14, 2023
5V2V
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Ethylene forming enzyme in complex with nickel
分子名称: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, NICKEL (II) ION
著者Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
登録日2017-03-06
公開日2017-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
8PW2
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BU of 8pw2 by Molmil
Protein p6 from bacteriophage phi29, C-terminal delta31 truncated version
分子名称: Histone-like protein p6
著者Alcorlo Pages, M, Hermoso Dominguez, J.
登録日2023-07-19
公開日2024-01-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Flexible structural arrangement and DNA-binding properties of protein p6 from Bacillus subtillis phage phi 29.
Nucleic Acids Res., 52, 2024
5LHB
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BU of 5lhb by Molmil
POLYADPRIBOSYL GLYCOSIDASE IN COMPLEX WITH PDD00017262
分子名称: 1-(cyclopropylmethyl)-6-[[(1-methylcyclopropyl)amino]-bis(oxidanyl)-$l^{4}-sulfanyl]-3-[(2-methyl-1,3-thiazol-5-yl)methyl]quinazoline-2,4-dione, DIMETHYL SULFOXIDE, Poly(ADP-ribose) glycohydrolase, ...
著者Tucker, J, Barkauskaite, E.
登録日2016-07-10
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献First-in-Class Chemical Probes against Poly(ADP-ribose) Glycohydrolase (PARG) Inhibit DNA Repair with Differential Pharmacology to Olaparib.
ACS Chem. Biol., 11, 2016
5UWF
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Crystal structure of human PDE10A in complex with inhibitor 16d
分子名称: 9-[(1S)-2,2-difluorocyclopropane-1-carbonyl]-6-[(4-methoxyphenyl)methyl]-8,9,10,11-tetrahydropyrido[4',3':4,5]thieno[3,2-e][1,2,4]triazolo[1,5-c]pyrimidin-5(6H)-one, MAGNESIUM ION, ZINC ION, ...
著者Xu, R, Cedervall, E.P, Sridhar, V, Barker, R, Aertgeerts, K.
登録日2017-02-21
公開日2017-04-26
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Discovery of Selective Phosphodiesterase 1 Inhibitors with Memory Enhancing Properties.
J. Med. Chem., 60, 2017
8BJ7
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BU of 8bj7 by Molmil
Desulfovibrio desulfuricans FeFe Hydrogenase C178A mutant in Hinact-like state
分子名称: Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, ...
著者Bikbaev, K, Span, I.
登録日2022-11-03
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Binding of exogenous cyanide reveals new active-site states in [FeFe] hydrogenases.
Chem Sci, 14, 2023
7OAR
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BU of 7oar by Molmil
Crystal structure of helicase Pif1 from Thermus oshimai in complex with parallel G-quadruplex
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (28-MER), MAGNESIUM ION, ...
著者Dai, Y.X, Liu, N.N, Guo, H.L, Chen, W.F, Rety, S, Xi, X.G.
登録日2021-04-20
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Structural mechanism underpinning Thermus oshimai Pif1-mediated G-quadruplex unfolding.
Embo Rep., 23, 2022
5V2Y
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Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and L-arginine
分子名称: 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ARGININE, ...
著者Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
登録日2017-03-06
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.428 Å)
主引用文献Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
7OHL
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BU of 7ohl by Molmil
SaFtsZ complexed with GDP, BeF3- and Mn2+
分子名称: BERYLLIUM TRIFLUORIDE ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, ...
著者Fernandez-Tornero, C, Ruiz, F.M, Andreu, J.M.
登録日2021-05-11
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献FtsZ filament structures in different nucleotide states reveal the mechanism of assembly dynamics.
Plos Biol., 20, 2022
7NYT
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BU of 7nyt by Molmil
Trichoderma reesei Cel7A E212Q mutant in complex with lactose.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COBALT (II) ION, Exoglucanase 1, ...
著者Haataja, T, Sandgren, M, Stahlberg, J.
登録日2021-03-23
公開日2022-03-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Enzyme kinetics by GH7 cellobiohydrolases on chromogenic substrates is dictated by non-productive binding: insights from crystal structures and MD simulation.
Febs J., 290, 2023

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件を2024-10-02に公開中

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