Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4ITZ
DownloadVisualize
BU of 4itz by Molmil
Crystal structure of the FK506 binding domain of Plasmodium vivax FKBP35 in complex with a tetrapeptide substrate
分子名称: 70 kDa peptidylprolyl isomerase, SULFATE ION, substrate peptide
著者Sreekanth, R, Yoon, H.S.
登録日2013-01-19
公開日2013-03-20
最終更新日2013-05-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into substrate binding by PvFKBP35, a peptidylprolyl cis-trans isomerase from the human malarial parasite Plasmodium vivax.
Eukaryot Cell, 12, 2013
8AEB
DownloadVisualize
BU of 8aeb by Molmil
SARS-CoV-2 Main Protease complexed with N-(pyridin-3-ylmethyl)thioformamide
分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, N-(pyridin-3-ylmethyl)thioformamide, ...
著者Hanoulle, X, Charton, J, Deprez, B.
登録日2022-07-12
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Novel dithiocarbamates selectively inhibit 3CL protease of SARS-CoV-2 and other coronaviruses.
Eur.J.Med.Chem., 250, 2023
6V8Y
DownloadVisualize
BU of 6v8y by Molmil
Structure of a Sodium Potassium ion Channel
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
著者Roy, R, Weiss, K.L, Coates, L.
登録日2019-12-12
公開日2021-04-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural plasticity of the selectivity filter in a nonselective ion channel.
Iucrj, 8, 2021
6V4I
DownloadVisualize
BU of 6v4i by Molmil
DanD
分子名称: DanD peptide
著者Hoang, H.N.
登録日2019-11-27
公開日2020-12-02
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献DanD
To Be Published
6VFO
DownloadVisualize
BU of 6vfo by Molmil
Solution structure of the PHD of mouse UHRF1 (NP95)
分子名称: E3 ubiquitin-protein ligase UHRF1, ZINC ION
著者Lemak, A, Houliston, S, Duan, S, Arrowsmith, C.H.
登録日2020-01-06
公開日2020-06-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Alternative splicing and allosteric regulation modulate the chromatin binding of UHRF1.
Nucleic Acids Res., 48, 2020
6VEE
DownloadVisualize
BU of 6vee by Molmil
Solution structure of the TTD and linker region of mouse UHRF1 (NP95)
分子名称: E3 ubiquitin-protein ligase UHRF1
著者Lemak, A, Houliston, S, Duan, S, Arrowsmith, C.H.
登録日2019-12-31
公開日2020-06-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Alternative splicing and allosteric regulation modulate the chromatin binding of UHRF1.
Nucleic Acids Res., 48, 2020
6VED
DownloadVisualize
BU of 6ved by Molmil
Solution structure of the TTD and linker region of UHRF1
分子名称: E3 ubiquitin-protein ligase UHRF1
著者Lemak, A, Houliston, S, Duan, S, Ong, M.S, Arrowsmith, C.H.
登録日2019-12-31
公開日2020-06-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Alternative splicing and allosteric regulation modulate the chromatin binding of UHRF1.
Nucleic Acids Res., 48, 2020
4IUA
DownloadVisualize
BU of 4iua by Molmil
Crystal Structure of the NK2 Fragment (31-290) of the mouse Hepatocyte Growth Factor/Scatter Factor
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hepatocyte growth factor, SULFATE ION
著者Tolbert, W.D, Zhou, E, Kovach, A, Melcher, K, Xu, H.E.
登録日2013-01-20
公開日2013-02-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Crystal Structure of the NK2 Fragment of the mouse Hepatocyte Growth Factor/Scatter Factor
To be Published
3OPI
DownloadVisualize
BU of 3opi by Molmil
7-DEAZA-2'-DEOXYADENOSINE modification in B-FORM DNA
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*(7DA)P*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, SODIUM ION
著者Kowal, E.A, Ganguly, M, Pallan, P.S, Marky, L.A, Gold, B, Egli, M, Stone, M.P.
登録日2010-09-01
公開日2011-08-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Altering the Electrostatic Potential in the Major Groove: Thermodynamic and Structural Characterization of 7-Deaza-2'-deoxyadenosine:dT Base Pairing in DNA.
J.Phys.Chem.B, 115, 2011
4IJO
DownloadVisualize
BU of 4ijo by Molmil
Unraveling hidden allosteric regulatory sites in structurally homologues metalloproteases
分子名称: CALCIUM ION, Macrophage metalloelastase, ZINC ION
著者Udi, Y, Fragai, M, Grossman, M, Mitternacht, S, Arad-Yellin, R, Calderone, V, Melikian, M, Toccafondi, M, Berezovsky, I.N, Luchinat, C, Sagi, I.
登録日2012-12-22
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Unraveling hidden regulatory sites in structurally homologous metalloproteases
J.Mol.Biol., 425, 2013
8AV9
DownloadVisualize
BU of 8av9 by Molmil
INDUCED MYELOID LEUKEMIA CELL DIFFERENTIATION PROTEIN FABCOMPLEX IN COMPLEX WITH COMPOUND 1
分子名称: (3R,6R,7S,8E,11S,12R,22S)-6'-chloro-7-methoxy-11,12-dimethyl-13,13-dioxo-spiro[20-oxa-13-gamma6-thia-1,14-diazatetracyclo[14.7.2.03,6.019,24]pentacosa-8,16(25),17,19(24)-tetraene-22,1'-tetralin]-15-one, Fab Heavy Chain, Fab Light Chain, ...
著者Hargreaves, D.
登録日2022-08-26
公開日2023-05-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Design of rigid protein-protein interaction inhibitors enables targeting of undruggable Mcl-1.
Proc.Natl.Acad.Sci.USA, 120, 2023
8AS2
DownloadVisualize
BU of 8as2 by Molmil
Structure of arrestin2 in complex with 4P CCR5 phosphopeptide and Fab30
分子名称: Beta-arrestin-1, C-C chemokine receptor type 5, Fab30 heavy chain, ...
著者Isaikina, P, Jakob, R.P, Maier, T, Grzesiek, S.
登録日2022-08-18
公開日2023-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A key GPCR phosphorylation motif discovered in arrestin2⋅CCR5 phosphopeptide complexes.
Mol.Cell, 83, 2023
8AS3
DownloadVisualize
BU of 8as3 by Molmil
Structure of arrestin2 in complex with 6P CCR5 phosphopeptide and Fab30
分子名称: Beta-arrestin-1, C-C chemokine receptor type 5, Fab30 heavy chain, ...
著者Isaikina, P, Jakob, R.P, Maier, T, Grzesiek, S.
登録日2022-08-18
公開日2023-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献A key GPCR phosphorylation motif discovered in arrestin2⋅CCR5 phosphopeptide complexes.
Mol.Cell, 83, 2023
4IHI
DownloadVisualize
BU of 4ihi by Molmil
Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis bound with NAD
分子名称: Delta-1-pyrroline-5-carboxylate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Lagautriere, T, Bashiri, G, Baker, E.N.
登録日2012-12-18
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Characterization of the proline-utilization pathway in Mycobacterium tuberculosis through structural and functional studies.
Acta Crystallogr.,Sect.D, 70, 2014
8AS4
DownloadVisualize
BU of 8as4 by Molmil
Crystal structure of human beta-arrestin-1
分子名称: Beta-arrestin-1
著者Jakob, R.P, Panwalkar, V, Grzesiek, S.
登録日2022-08-18
公開日2023-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A key GPCR phosphorylation motif discovered in arrestin2⋅CCR5 phosphopeptide complexes.
Mol.Cell, 83, 2023
4IPS
DownloadVisualize
BU of 4ips by Molmil
Substrate and reaction specificity of Mycobacterium tuberculosis cytochrome P450 CYP121
分子名称: (3S,6S)-3,6-bis(4-hydroxybenzyl)piperazin-2-one, Cytochrome P450 121, GLYCEROL, ...
著者Fonvielle, M, LeDu, M.H, Lequin, O, Lecoq, A, Jacquet, M, Thai, R, Dubois, S, Grach, G, Gondry, M, Belin, P.
登録日2013-01-10
公開日2013-05-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Substrate and Reaction Specificity of Mycobacterium tuberculosis Cytochrome P450 CYP121: INSIGHTS FROM BIOCHEMICAL STUDIES AND CRYSTAL STRUCTURES.
J.Biol.Chem., 288, 2013
4IPX
DownloadVisualize
BU of 4ipx by Molmil
Analyzing the visible conformational substates of the FK506 binding protein FKBP12
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Peptidyl-prolyl cis-trans isomerase FKBP1A
著者Chen, H, Mustafi, S.M, Li, H.M, LeMaster, D.M, Hernandez, G.
登録日2013-01-10
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Analysing the visible conformational substates of the FK506-binding protein FKBP12.
Biochem.J., 453, 2013
4IQ2
DownloadVisualize
BU of 4iq2 by Molmil
P21 crystal form of FKBP12.6
分子名称: MALONIC ACID, Peptidyl-prolyl cis-trans isomerase FKBP1B
著者Chen, H, Mustafi, S.M, Li, H.M, LeMaster, D.M, Hernandez, G.
登録日2013-01-10
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure and conformational flexibility of the unligated FK506-binding protein FKBP12.6.
Acta Crystallogr.,Sect.D, 70, 2014
4IPW
DownloadVisualize
BU of 4ipw by Molmil
Substrate and reaction specificity of Mycobacterium tuberculosis cytochrome P450 CYP121
分子名称: (3S,6S)-3-(3,4-dihydroxybenzyl)-6-(4-hydroxybenzyl)piperazine-2,5-dione, Cytochrome P450 121, GLYCEROL, ...
著者Fonvielle, M, Ledu, M.H, Lequin, O, Lecoq, A, Jacquet, M, Thai, R, Dubois, S, Grach, G, Gondry, M, Belin, P.
登録日2013-01-10
公開日2013-05-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Substrate and Reaction Specificity of Mycobacterium tuberculosis Cytochrome P450 CYP121: INSIGHTS FROM BIOCHEMICAL STUDIES AND CRYSTAL STRUCTURES.
J.Biol.Chem., 288, 2013
4IQC
DownloadVisualize
BU of 4iqc by Molmil
P3121 crystal form of FKBP12.6
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1B
著者Chen, H, Mustafi, S.M, Li, H.M, LeMaster, D.M, Hernandez, G.
登録日2013-01-11
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Crystal structure and conformational flexibility of the unligated FK506-binding protein FKBP12.6.
Acta Crystallogr.,Sect.D, 70, 2014
3PA0
DownloadVisualize
BU of 3pa0 by Molmil
Crystal Structure of Chiral Gamma-PNA with Complementary DNA Strand: Insight Into the Stability and Specificity of Recognition an Conformational Preorganization
分子名称: 1,2-ETHANEDIOL, DNA 5'-D(*AP*TP*CP*TP*GP*TP*GP*GP*TP*C)-3', PEPTIDE NUCLEIC ACID, ...
著者Yeh, J.I, Shivachev, B, Du, S.
登録日2010-10-18
公開日2010-12-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of chiral gammaPNA with complementary DNA strand: insights into the stability and specificity of recognition and conformational preorganization.
J.Am.Chem.Soc., 132, 2010
6VKX
DownloadVisualize
BU of 6vkx by Molmil
Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain BM13851
分子名称: DI(HYDROXYETHYL)ETHER, Outer capsid protein VP4, TETRAETHYLENE GLYCOL
著者Xu, S, McGinnis, K.R, Jiang, X, Kennedy, M.A.
登録日2020-01-22
公開日2021-01-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structural basis of P[II] rotavirus evolution and host ranges under selection of histo-blood group antigens.
Proc.Natl.Acad.Sci.USA, 118, 2021
4IQ7
DownloadVisualize
BU of 4iq7 by Molmil
Substrate and reaction specificity of Mycobacterium tuberculosis cytochrome P450 CYP121
分子名称: (3S,6S)-3-(4-hydroxybenzyl)-6-methylpiperazine-2,5-dione, Cytochrome P450 121, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Fonvielle, M, Ledu, M.H, Lequin, O, Lecoq, A, Jacquet, M, Thai, R, Dubois, S, Grach, G, Gondry, M, Belin, P.
登録日2013-01-11
公開日2013-05-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate and Reaction Specificity of Mycobacterium tuberculosis Cytochrome P450 CYP121: INSIGHTS FROM BIOCHEMICAL STUDIES AND CRYSTAL STRUCTURES.
J.Biol.Chem., 288, 2013
4IQ9
DownloadVisualize
BU of 4iq9 by Molmil
Substrate and reaction specificity of Mycobacterium tuberculosis cytochrome P450 CYP121
分子名称: (3S,6S)-3-(4-hydroxybenzyl)-6-(1H-indol-3-ylmethyl)piperazine-2,5-dione, Cytochrome P450 121, GLYCEROL, ...
著者Fonvielle, M, Ledu, M.H, Lequin, O, Lecoq, A, Jacquet, M, Thai, R, Dubois, S, Grach, G, Gondry, M, Belin, P.
登録日2013-01-11
公開日2013-05-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Substrate and Reaction Specificity of Mycobacterium tuberculosis Cytochrome P450 CYP121: INSIGHTS FROM BIOCHEMICAL STUDIES AND CRYSTAL STRUCTURES.
J.Biol.Chem., 288, 2013
4IQK
DownloadVisualize
BU of 4iqk by Molmil
Crystal structure of cpd 16 bound to Keap1 Kelch domain
分子名称: Kelch-like ECH-associated protein 1, N,N'-naphthalene-1,4-diylbis(4-methoxybenzenesulfonamide)
著者Silvian, L, Marcotte, D.
登録日2013-01-11
公開日2013-05-15
最終更新日2013-07-03
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Small molecules inhibit the interaction of Nrf2 and the Keap1 Kelch domain through a non-covalent mechanism.
Bioorg.Med.Chem., 21, 2013

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon