PDB: 2869 件ウェブページステータス検索Chemie searchBIRD

---

4V8X	Structure of Thermus thermophilus ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Feng, S, Chen, Y, Kamada, K, Wang, H, Tang, K, Wang, M, Gao, Y.G. 登録日 2013-07-19 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Yoeb-Ribosome Structure: A Canonical Rnase that Requires the Ribosome for its Specific Activity. Nucleic Acids Res., 41, 2013
4V9L	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state. 分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2013-04-24 公開日 2014-07-09 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation. Science, 340, 2013
4WIZ	Crystal structure of Grouper nervous necrosis virus-like particle at 3.6A 分子名称: CALCIUM ION, Coat protein 著者 Chen, N.C, Chen, C.J, Yoshimura, M, Guan, H.H, Chen, T.Y. 登録日 2014-09-28 公開日 2015-10-07 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Crystal Structures of a Piscine Betanodavirus: Mechanisms of Capsid Assembly and Viral Infection Plos Pathog., 11, 2015
4WFA	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S rRNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Eyal, Z, Matzov, D, Krupkin, M, Wekselman, I, Zimmerman, E, Rozenberg, H, Bashan, A, Yonath, A.E. 登録日 2014-09-14 公開日 2015-10-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.392 Å) 主引用文献 Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus. Proc.Natl.Acad.Sci.USA, 112, 2015
4WFN	Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22 in complex with erythromycin 分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Wekselman, I, Zimmerman, E, Rozenberg, H, Bashan, A, Yonath, A. 登録日 2014-09-16 公開日 2015-12-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.54 Å) 主引用文献 The Ribosomal Protein uL22 Modulates the Shape of the Protein Exit Tunnel. Structure, 25, 2017
4WQ1	Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G. 登録日 2014-10-21 公開日 2015-06-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural insights into the translational infidelity mechanism. Nat Commun, 6, 2015
4WQF	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Lin, J, Gagnon, M.G, Steitz, T.A. 登録日 2014-10-21 公開日 2015-01-28 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation. Cell, 160, 2015
7COY	Structure of the far-red light utilizing photosystem I of Acaryochloris marina 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, CHLOROPHYLL D, ... 著者 Kawakami, K, Yonekura, K, Hamaguchi, T, Kashino, Y, Shinzawa-Itoh, K, Inoue-Kashino, N, Itoh, S, Ifuku, K, Yamashita, E. 登録日 2020-08-05 公開日 2021-03-31 最終更新日 2021-05-05 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Structure of the far-red light utilizing photosystem I of Acaryochloris marina. Nat Commun, 12, 2021
7COH	Dimeric Form of Bovine Heart Cytochrome c Oxidase in the Fully Oxidized State 分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, 1,2-ETHANEDIOL, ... 著者 Shinzawa-Itoh, K, Muramoto, K. 登録日 2020-08-04 公開日 2021-04-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The 1.3-A Resolution structure of bovine cytochrome c oxidase suggests a dimerization mechanism Biochim.Biophys.Acta, 2021
7CGO	Cryo-EM structure of the flagellar motor-hook complex from Salmonella 分子名称: Flagellar L-ring protein, Flagellar M-ring protein, Flagellar MS ring L1, ... 著者 Tan, J.X, Chang, S.H, Wang, X.F, Xu, C.H, Zhou, Y, Zhang, X, Zhu, Y.Q. 登録日 2020-07-01 公開日 2021-04-28 最終更新日 2021-05-26 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis of assembly and torque transmission of the bacterial flagellar motor. Cell, 184, 2021
7CJI	Photosystem II structure in the S1 state 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Li, H, Shen, J.-R, Suga, M. 登録日 2020-07-11 公開日 2021-04-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Capturing structural changes of the S 1 to S 2 transition of photosystem II using time-resolved serial femtosecond crystallography. Iucrj, 8, 2021
7CJJ	Photosystem II structure in the S2 state 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Li, H, Shen, J.-R, Suga, M. 登録日 2020-07-11 公開日 2021-04-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Capturing structural changes of the S 1 to S 2 transition of photosystem II using time-resolved serial femtosecond crystallography. Iucrj, 8, 2021
7COU	Structure of cyanobacterial photosystem II in the dark S1 state 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Li, H, Shen, J.-R, Suga, M. 登録日 2020-08-05 公開日 2021-04-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Capturing structural changes of the S 1 to S 2 transition of photosystem II using time-resolved serial femtosecond crystallography. Iucrj, 8, 2021
4WRA	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G. 登録日 2014-10-23 公開日 2015-06-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Structural insights into the translational infidelity mechanism. Nat Commun, 6, 2015
4WPO	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Lin, J, Gagnon, M.G, Steitz, T.A. 登録日 2014-10-20 公開日 2015-01-28 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation. Cell, 160, 2015
4WU1	Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G. 登録日 2014-10-30 公開日 2015-06-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural insights into the translational infidelity mechanism. Nat Commun, 6, 2015
7CK8	Crystal structure of human ferritin heavy chain mutant C90S/C102S/C130S 分子名称: CHLORIDE ION, FE (III) ION, Ferritin heavy chain, ... 著者 Chen, X, Jiang, B, Yan, X, Fan, K. 登録日 2020-07-16 公開日 2021-05-26 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A natural drug entry channel in the ferritin nanocage. Nano Today, 35, 2020
4X66	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Demirci, H, Chen, J, Choi, J, Soltis, M, Puglisi, J.D. 登録日 2014-12-06 公開日 2015-11-18 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (3.446 Å) 主引用文献 N(6)-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics. Nat.Struct.Mol.Biol., 23, 2016
4WF9	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S ribosomal RNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Eyal, Z, Matzov, D, Krupkin, M, Wekselman, I, Zimmerman, E, Rozenberg, H, Bashan, A, Yonath, A.E. 登録日 2014-09-14 公開日 2015-10-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.427 Å) 主引用文献 Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus. Proc.Natl.Acad.Sci.USA, 112, 2015
4WFB	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S rRNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Eyal, Z, Matzov, D, Krupkin, M, Wekselman, I, Zimmerman, E, Rozenberg, H, Bashan, A, Yonath, A.E. 登録日 2014-09-14 公開日 2015-10-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.43 Å) 主引用文献 Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus. Proc.Natl.Acad.Sci.USA, 112, 2015
4WOI	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Pulk, A, Cate, J.H.D, Blanchard, S, Wasserman, M, Altman, R, Zhou, Z, Zinder, J, Green, K, Garneau-Tsodikova, S. 登録日 2014-10-15 公開日 2015-08-05 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Chemically related 4,5-linked aminoglycoside antibiotics drive subunit rotation in opposite directions. Nat Commun, 6, 2015
4X6Z	Yeast 20S proteasome in complex with PR-VI modulator 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, MAGNESIUM ION, ... 著者 Rostankowski, R, Witkowska, J, Borek, D, Otwinowski, Z, Jankowska, E. 登録日 2014-12-09 公開日 2015-12-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structures revealed the common place of binding of low-molecular mass activators with the 20S proteasome To Be Published
4WF1	Crystal structure of the E. coli ribosome bound to negamycin. 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Olivier, N.B, Altman, R.B, Noeske, J, Basarab, G.S, Code, E, Ferguson, A.D, Gao, N, Huang, J, Juette, M.F, Livchak, S, Miller, M.D, Prince, D.B, Cate, J.H.D, Buurman, E.T, Blanchard, S.C. 登録日 2014-09-11 公開日 2014-11-05 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.09 Å) 主引用文献 Negamycin induces translational stalling and miscoding by binding to the small subunit head domain of the Escherichia coli ribosome. Proc.Natl.Acad.Sci.USA, 111, 2014
4WQU	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Lin, J, Gagnon, M.G, Steitz, T.A. 登録日 2014-10-22 公開日 2015-01-28 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation. Cell, 160, 2015
7CP5	Bovine heart cytochrome c oxidase in a catalytic intermediate of E at 1.76 angstrom resolution 分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ... 著者 Tsukihara, T, Shimada, A. 登録日 2020-08-06 公開日 2021-07-21 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Critical roles of the Cu B site in efficient proton pumping as revealed by crystal structures of mammalian cytochrome c oxidase catalytic intermediates. J.Biol.Chem., 297, 2021

<60616263646566676869707172737475>