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8Q9P
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Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and HDAC5 deacetylase binding motif
分子名称: HDAC5 (histone deacetylase 5) binding motif peptide: TRP-GLY-SER-GLY-GLU-VAL-LYS-LEU-ARG-LEU-GLN-GLU-PHE-LEU-LEU-SER-LYS-SER, MADS box dsDNA fw: AACTATTTATAAGA, MADS box dsNA rev:TCTTATAAATAGTT, ...
著者Chinellato, M, Carli, A, Perin, S, Mazzocato, Y, Biondi, B, Di Giorgio, E, Brancolini, C, Angelini, A, Cendron, L.
登録日2023-08-20
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Folding of Class IIa HDAC Derived Peptides into alpha-helices Upon Binding to Myocyte Enhancer Factor-2 in Complex with DNA.
J.Mol.Biol., 436, 2024
1FIQ
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CRYSTAL STRUCTURE OF XANTHINE OXIDASE FROM BOVINE MILK
分子名称: 2-HYDROXYBENZOIC ACID, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Enroth, C, Eger, B.T, Okamoto, K, Nishino, T, Nishino, T, Pai, E.F.
登録日2000-08-04
公開日2000-10-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of bovine milk xanthine dehydrogenase and xanthine oxidase: structure-based mechanism of conversion.
Proc.Natl.Acad.Sci.USA, 97, 2000
8FR9
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Mouse acidic mammalian chitinase, catalytic domain in complex with N,N'-diacetylchitobiose at pH 5.08
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acidic mammalian chitinase, ...
著者Diaz, R.E, Fraser, J.S.
登録日2023-01-06
公開日2023-03-15
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural characterization of ligand binding and pH-specific enzymatic activity of mouse Acidic Mammalian Chitinase.
Biorxiv, 2024
8FRG
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Mouse acidic mammalian chitinase, catalytic domain in complex with N,N'-diacetylchitobiose at pH 5.43
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acidic mammalian chitinase, ...
著者Diaz, R.E, Fraser, J.S.
登録日2023-01-06
公開日2023-03-15
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural characterization of ligand binding and pH-specific enzymatic activity of mouse Acidic Mammalian Chitinase.
Biorxiv, 2024
7KGE
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Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-II
分子名称: Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
著者Morgan, C.E, Yu, E.W.
登録日2020-10-16
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGI
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BU of 7kgi by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-III
分子名称: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
著者Morgan, C.E, Yu, E.W.
登録日2020-10-16
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
1FCK
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STRUCTURE OF DICERIC HUMAN LACTOFERRIN
分子名称: CARBONATE ION, CERIUM (III) ION, LACTOFERRIN
著者Baker, H.M, Baker, C.J, Smith, C.A, Baker, E.N.
登録日2000-07-18
公開日2001-01-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Metal substitution in transferrins: specific binding of cerium(IV) revealed by the crystal structure of cerium-substituted human lactoferrin.
J.Biol.Inorg.Chem., 5, 2000
7L30
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BU of 7l30 by Molmil
Binjari virus (BinJV)
分子名称: Envelope protein E, prM protein
著者Hardy, J.M, Venugopal, H.V, Newton, N.D, Watterson, D, Coulibaly, F.J.
登録日2020-12-17
公開日2021-03-10
最終更新日2021-05-26
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献The structure of an infectious immature flavivirus redefines viral architecture and maturation.
Sci Adv, 7, 2021
5MLQ
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Structure of CDPS from Nocardia brasiliensis
分子名称: CDPS, CITRIC ACID
著者Bourgeois, G, Seguin, J, Moutiez, M, Babin, M, Belin, P, Mechulam, Y, Gondry, M, Schmitt, E.
登録日2016-12-07
公開日2018-05-02
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Structural basis for partition of the cyclodipeptide synthases into two subfamilies.
J.Struct.Biol., 203, 2018
8FEZ
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BU of 8fez by Molmil
Prefusion-stabilized SARS-CoV-2 spike protein
分子名称: Spike glycoprotein
著者Gonzalez, K.J, Mousa, J.J, Strauch, E.M.
登録日2022-12-07
公開日2023-04-12
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献A general computational design strategy for stabilizing viral class I fusion proteins.
Nat Commun, 15, 2024
7KGH
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Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-II
分子名称: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
著者Morgan, C.E, Yu, E.W.
登録日2020-10-16
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
4MQB
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BU of 4mqb by Molmil
Crystal structure of thymidylate kinase from Staphylococcus aureus in complex with 2-(N-morpholino)ethanesulfonic acid
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, TETRAETHYLENE GLYCOL, Thymidylate kinase
著者Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Jedrzejczak, R, Babnigg, G, Rubin, E, Sacchettini, J, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2013-09-16
公開日2013-10-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of thymidylate kinase from Staphylococcus aureus in complex with 2-(N-morpholino)ethanesulfonic acid
To be Published
1FQ3
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BU of 1fq3 by Molmil
CRYSTAL STRUCTURE OF HUMAN GRANZYME B
分子名称: GRANZYME B, SULFATE ION, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Estebanez-Perpina, E, Fuentes-Prior, P, Belorgey, D, Rubin, H, Bode, W.
登録日2000-09-03
公開日2001-01-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure of the caspase activator human granzyme B, a proteinase highly specific for an Asp-P1 residue.
Biol.Chem., 381, 2000
8Q9Q
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Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and HDAC7 deacetylase binding motif
分子名称: HDAC7 (histone deacetylase 7) binding motif peptide: GLY-VAL-VAL-LYS-GLN-LYS-LEU-ALA-GLU-VAL-ILE-LEU-LYS-LYS-GLN, MADS box dsDNA: AACTATTTATAAGA, MADS box dsDNA: TCTTATAAATAGTT, ...
著者Chinellato, M, Carli, A, Perin, S, Mazzocato, Y, Biondi, B, Di Giorgio, E, Brancolini, C, Angelini, A, Cendron, L.
登録日2023-08-20
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Folding of Class IIa HDAC Derived Peptides into alpha-helices Upon Binding to Myocyte Enhancer Factor-2 in Complex with DNA.
J.Mol.Biol., 436, 2024
1TY9
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BU of 1ty9 by Molmil
X-RAY CRYSTAL STRUCTURE OF PHZG FROM PSEUDOMONAS FLUORESCENS
分子名称: FLAVIN MONONUCLEOTIDE, Phenazine biosynthesis protein phzG, SULFATE ION
著者Parsons, J.F, Eisenstein, E, Ladner, J.E.
登録日2004-07-07
公開日2004-11-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the phenazine biosynthesis enzyme PhzG.
Acta Crystallogr.,Sect.D, 60, 2004
1OVO
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BU of 1ovo by Molmil
CRYSTALLOGRAPHIC REFINEMENT OF JAPANESE QUAIL OVOMUCOID, A KAZAL-TYPE INHIBITOR, AND MODEL BUILDING STUDIES OF COMPLEXES WITH SERINE PROTEASES
分子名称: OVOMUCOID THIRD DOMAIN
著者Weber, E, Papamokos, E, Bode, W, Huber, R, Kato, I, Laskowskijunior, M.
登録日1982-01-18
公開日1982-05-26
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic refinement of Japanese quail ovomucoid, a Kazal-type inhibitor, and model building studies of complexes with serine proteases.
J.Mol.Biol., 158, 1982
1FOX
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BU of 1fox by Molmil
NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF 50S RIBOSOMAL PROTEIN L11, 33 STRUCTURES
分子名称: L11-C76
著者Markus, M.A, Hinck, A.P, Huang, S, Draper, D.E, Torchia, D.A.
登録日1996-09-13
公開日1997-03-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献High resolution solution structure of ribosomal protein L11-C76, a helical protein with a flexible loop that becomes structured upon binding to RNA.
Nat.Struct.Biol., 4, 1997
7KJV
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BU of 7kjv by Molmil
Structure of HIV-1 reverse transcriptase initiation complex core
分子名称: HIV-1 viral RNA fragment, MAGNESIUM ION, Reverse transcriptase/ribonuclease H, ...
著者Ha, B, Larsen, K.P, Zhang, J, Fu, Z, Montabana, E, Jackson, L.N, Chen, D.H, Puglisi, E.V.
登録日2020-10-26
公開日2021-03-17
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献High-resolution view of HIV-1 reverse transcriptase initiation complexes and inhibition by NNRTI drugs.
Nat Commun, 12, 2021
6ETB
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BU of 6etb by Molmil
Aerobic S262Y mutation of E. coli FLRD core
分子名称: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
著者Borges, P.T, Romao, C.V, Carrondo, M.A, Teixeira, M, Frazao, C.
登録日2017-10-26
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.905 Å)
主引用文献A tyrosine mutation in E. coli flavodiiron protein increases radiation sensitivity in the crystal structure
To Be Published
7KGD
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BU of 7kgd by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-I
分子名称: Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
著者Morgan, C.E, Yu, E.W.
登録日2020-10-16
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
1JYO
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BU of 1jyo by Molmil
Structure of the Salmonella Virulence Effector SptP in Complex with its Secretion Chaperone SicP
分子名称: SicP, protein tyrosine phosphatase SptP
著者Stebbins, C.E, Galan, J.E.
登録日2001-09-12
公開日2001-11-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Maintenance of an unfolded polypeptide by a cognate chaperone in bacterial type III secretion.
Nature, 414, 2001
5C97
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Insulin regulated aminopeptidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Leucyl-cystinyl aminopeptidase, ...
著者Mpakali, A, Saridakis, E, Harlos, K, Zhao, Y, Stratikos, E.
登録日2015-06-26
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.37 Å)
主引用文献Crystal Structure of Insulin-Regulated Aminopeptidase with Bound Substrate Analogue Provides Insight on Antigenic Epitope Precursor Recognition and Processing.
J Immunol., 195, 2015
5MX1
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Crystal structure of human chondroadherin
分子名称: CHLORIDE ION, Chondroadherin, NICKEL (II) ION, ...
著者Paracuellos, P, Hohenester, E.
登録日2017-01-20
公開日2017-03-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural and functional analysis of two small leucine-rich repeat proteoglycans, fibromodulin and chondroadherin.
Matrix Biol., 63, 2017
7KJW
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Structure of HIV-1 reverse transcriptase initiation complex core with efavirenz
分子名称: (-)-6-CHLORO-4-CYCLOPROPYLETHYNYL-4-TRIFLUOROMETHYL-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-2-ONE, HIV-1 viral RNA fragment, MAGNESIUM ION, ...
著者Ha, B, Larsen, K.P, Zhang, J, Fu, Z, Montabana, E, Jackson, L.N, Chen, D.H, Puglisi, E.V.
登録日2020-10-26
公開日2021-03-17
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献High-resolution view of HIV-1 reverse transcriptase initiation complexes and inhibition by NNRTI drugs.
Nat Commun, 12, 2021
6SBP
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Plant Cysteine Oxidase PCO5 from Arabidopsis thaliana
分子名称: GLYCEROL, NICKEL (II) ION, Plant cysteine oxidase 5
著者White, M.D, Flashman, E, McDonough, M.A.
登録日2019-07-22
公開日2020-07-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structures of Arabidopsis thaliana oxygen-sensing plant cysteine oxidases 4 and 5 enable targeted manipulation of their activity.
Proc.Natl.Acad.Sci.USA, 117, 2020

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