PDB: 47720 件ウェブページステータス検索Chemie searchBIRD

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2AT6	1.22 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus Containing Fe(III) Deuteroporphyrin IX Complexed With Water at pH 5.6 分子名称: FE(III) DEUTEROPORPHYRIN IX, Nitrophorin 4 著者 Amoia, A.M, Montfort, W.R. 登録日 2005-08-24 公開日 2006-08-22 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 Heme distortion in nitrophorin 4: high resolution structures of mutated positions L123V and L133V and heme altered proteins To be Published
1QVF	Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui 分子名称: 23S ribosomal rna, 50S RIBOSOMAL PROTEIN L10E, 50S ribosomal protein L13P, ... 著者 Schmeing, T.M, Moore, P.B, Steitz, T.A. 登録日 2003-08-27 公開日 2003-11-11 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structures of deacylated tRNA mimics bound to the E site of the large ribosomal subunit RNA, 9, 2003
2BAN	Crystal structure of HIV-1 reverse transcriptase (RT) in complex with JANSSEN-R157208 分子名称: 5-ETHYL-3-[(2-METHOXYETHYL)METHYLAMINO]-6-METHYL-4-(3-METHYLBENZYL)PYRIDIN-2(1H)-ONE, MANGANESE (II) ION, Reverse transcriptase P51 subunit, ... 著者 Das, K, Arnold, E. 登録日 2005-10-14 公開日 2005-12-06 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Crystal Structures for HIV-1 Reverse Transcriptase in Complexes with Three Pyridinone Derivatives: A New Class of Non-Nucleoside Inhibitors Effective against a Broad Range of Drug-Resistant Strains. J.Med.Chem., 48, 2005
3LT5	X-ray Crystallographic structure of a Pseudomonas Aeruginosa Azoreductase in complex with balsalazide 分子名称: (3E)-3-({4-[(2-carboxyethyl)carbamoyl]phenyl}hydrazono)-6-oxocyclohexa-1,4-diene-1-carboxylic acid, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase 1, ... 著者 Ryan, A, Laurieri, N, Westwood, I, Wang, C.-J, Lowe, E, Sim, E. 登録日 2010-02-15 公開日 2010-05-12 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A Novel Mechanism for Azoreduction J.Mol.Biol., 400, 2010
1QBF	NMR SOLUTION STRUCTURE OF PORCINE PEPTIDE YY 分子名称: PEPTIDE YY 著者 Keire, D.A, Kobayashi, M, Solomon, T.E, Reeve Jr, J.R. 登録日 1999-04-16 公開日 2000-08-16 最終更新日 2019-11-13 実験手法 SOLUTION NMR 主引用文献 Solution structure of monomeric peptide YY supports the functional significance of the PP-fold. Biochemistry, 39, 2000
7ASS	OXA-48_L67F_CAZ. What Doesnt Kill You Makes You Stronger: Sub-MIC Selection Drives Cryptic Evolution of OXA-48 分子名称: Beta-lactamase, CHLORIDE ION, hydrolyzed ceftazidime 著者 Frohlich, C, Leiros, H.-K.S. 登録日 2020-10-28 公開日 2020-12-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Cryptic beta-Lactamase Evolution Is Driven by Low beta-Lactam Concentrations. Msphere, 6, 2021
7AHL	ALPHA-HEMOLYSIN FROM STAPHYLOCOCCUS AUREUS 分子名称: ALPHA-HEMOLYSIN 著者 Song, L, Hobaugh, M, Shustak, C, Cheley, S, Bayley, H, Gouaux, J.E. 登録日 1996-12-02 公開日 1998-01-14 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore. Science, 274, 1996
7AQO	yeast THO-Sub2 complex dimer 分子名称: BJ4_G0025130.mRNA.1.CDS.1, EM14S01-3B_G0007820.mRNA.1.CDS.1, TEX1 isoform 1, ... 著者 Schuller, S.K, Schuller, J.M, Prabu, R.J, Baumgartner, M, Bonneau, F, basquin, J, Conti, E. 登録日 2020-10-22 公開日 2020-12-02 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structural insights into the nucleic acid remodeling mechanisms of the yeast THO-Sub2 complex. Elife, 9, 2020
2B9A	Human transthyretin (TTR) complexed with diflunisal analogues- TTR.3',5'-difluorobiphenyl-4-carboxylic acid 分子名称: 3',5'-DIFLUOROBIPHENYL-4-CARBOXYLIC ACID, Transthyretin 著者 Palaninathan, S.K, Kelly, J.W, Sacchettini, J.C. 登録日 2005-10-11 公開日 2005-10-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Diflunisal Analogues Stabilize the Native State of Transthyretin. Potent Inhibition of Amyloidogenesis. J.Med.Chem., 47, 2004
3LL8	Crystal Structure of Calcineurin in Complex with AKAP79 Peptide 分子名称: AKAP79 peptide, CALCIUM ION, Calcineurin subunit B type 1, ... 著者 Li, H, Hogan, P.G. 登録日 2010-01-28 公開日 2011-01-12 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Balanced interactions of calcineurin with AKAP79 regulate Ca(2+)-calcineurin-NFAT signaling. Nat.Struct.Mol.Biol., 19, 2012
1QHQ	AURACYANIN, A BLUE COPPER PROTEIN FROM THE GREEN THERMOPHILIC PHOTOSYNTHETIC BACTERIUM CHLOROFLEXUS AURANTIACUS 分子名称: CHLORIDE ION, COPPER (II) ION, PROTEIN (AURACYANIN), ... 著者 Bond, C.S, Blankenship, R.E, Freeman, H.C, Guss, J.M, Maher, M, Selvaraj, F, Wilce, M.C.J, Willingham, K. 登録日 1999-05-25 公開日 2001-03-07 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal structure of auracyanin, a "blue" copper protein from the green thermophilic photosynthetic bacterium Chloroflexus aurantiacus. J.Mol.Biol., 306, 2001
1R0A	Crystal structure of HIV-1 reverse transcriptase covalently tethered to DNA template-primer solved to 2.8 angstroms 分子名称: 5'-D(*A*TP*GP*CP*AP*TP*CP*GP*GP*CP*GP*CP*TP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*GP*GP*T)-3', 5'-D(*C*CP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*AP*GP*CP*GP*CP*CP*GP*(2DA))-3', GLYCEROL, ... 著者 Tuske, S, Ding, J, Arnold, E. 登録日 2003-09-19 公開日 2004-08-03 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Nonnucleoside inhibitor binding affects the interactions of the fingers subdomain of human immunodeficiency virus type 1 reverse transcriptase with DNA. J.Virol., 78, 2004
2B23	Human estrogen receptor alpha ligand-binding domain and a glucocorticoid receptor-interacting protein 1 NR box II peptide 分子名称: Estrogen receptor, Nuclear receptor coactivator 2 著者 Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L. 登録日 2005-09-16 公開日 2006-09-19 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 NFkappaB selectivity of estrogen receptor ligands revealed by comparative crystallographic analyses Nat.Chem.Biol., 4, 2008
1QYF	Crystal structure of matured green fluorescent protein R96A variant 分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, green-fluorescent protein 著者 Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2003-09-10 公開日 2003-09-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures. Proc.Natl.Acad.Sci.Usa, 100, 2003
3LO8	Crystal Structure of The Oxidized Form of Ferredoxin:NADP+ Reductase From Maize Root at 1.05 Angstroms 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, SODIUM ION 著者 Faber, H.R, Karplus, P.A. 登録日 2010-02-03 公開日 2010-03-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Using a conformation-dependent stereochemical library improves crystallographic refinement of proteins. Acta Crystallogr.,Sect.D, 66, 2010
3LD0	Crystal structure of B.licheniformis Anti-TRAP protein, an antagonist of TRAP-RNA interactions 分子名称: Inhibitor of TRAP, regulated by T-BOX (Trp) sequence RtpA, MAGNESIUM ION, ... 著者 Shevtsov, M.B, Chen, Y, Isupov, M.N, Gollnick, P, Antson, A.A. 登録日 2010-01-12 公開日 2010-02-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Bacillus licheniformis Anti-TRAP can assemble into two types of dodecameric particles with the same symmetry but inverted orientation of trimers. J.Struct.Biol., 170, 2010
7APK	Structure of the human THO - UAP56 complex 分子名称: Spliceosome RNA helicase DDX39B, THO complex subunit 1, THO complex subunit 2, ... 著者 Hohmann, U, Puehringer, T, Plaschka, C. 登録日 2020-10-17 公開日 2020-12-16 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structure of the human core transcription-export complex reveals a hub for multivalent interactions. Elife, 9, 2020
1YTM	Crystal structure of phosphoenolpyruvate carboxykinase of Anaerobiospirillum succiniciproducens complexed with ATP, oxalate, magnesium and manganese ions 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MANGANESE (II) ION, ... 著者 Delbaere, L.T.J, Cotelesage, J.J.H. 登録日 2005-02-10 公開日 2006-01-24 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of Anaerobiospirillum succiniciproducens PEP carboxykinase reveals an important active site loop Int.J.Biochem.Cell Biol., 37, 2005
1QZY	Human Methionine Aminopeptidase in complex with bengamide inhibitor LAF153 and cobalt 分子名称: (E)-(2R,3R,4S,5R)-3,4,5-TRIHYDROXY-2-METHOXY-8,8-DIMETHYL-NON-6-ENOIC ACID ((3S,6R)-6-HYDROXY-2-OXO-AZEPAN-3-YL)-AMIDE, COBALT (II) ION, Methionine aminopeptidase 2, ... 著者 Eck, M.J, Song, H.K, Morollo, A. 登録日 2003-09-18 公開日 2003-11-25 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Proteomics-based target identification: bengamides as a new class of methionine aminopeptidase inhibitors. J.Biol.Chem., 278, 2003
3LKT	Tyrosine 447 of Protocatechuate 3,4-Dioxygenase Controls Efficient Progress Through Catalysis 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, CHLORIDE ION, ... 著者 Lipscomb, J.D, Purpero, V.M. 登録日 2010-01-27 公開日 2011-02-23 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Tyrosine 447 of Protocatechuate 3,4-Dioxygenase Controls Efficient Progress Through Catalysis To be Published
7B7N	Human herpesvirus-8 gH/gL in complex with EphA2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ... 著者 Pederzoli, R, Guardado-Calvo, P, Rey, F.A, Backovic, M. 登録日 2020-12-11 公開日 2020-12-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Human herpesvirus 8 molecular mimicry of ephrin ligands facilitates cell entry and triggers EphA2 signaling. Plos Biol., 19, 2021
1YRX	Structure of a novel photoreceptor: the BLUF domain of AppA from Rhodobacter sphaeroides 分子名称: FLAVIN MONONUCLEOTIDE, N-DODECYL-N,N-DIMETHYLGLYCINATE, hypothetical protein Rsph03001874 著者 Anderson, S, Dragnea, V, Masuda, S, Ybe, J, Moffat, K, Bauer, C. 登録日 2005-02-05 公開日 2005-06-28 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of a Novel Photoreceptor, the BLUF Domain of AppA from Rhodobacter sphaeroides Biochemistry, 44, 2005
1YNJ	Taq RNA polymerase-Sorangicin complex 分子名称: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ... 著者 Campbell, E.A, Pavlova, O, Zenkin, N, Leon, F, Irschik, H, Jansen, R, Severinov, K, Darst, S.A. 登録日 2005-01-24 公開日 2005-03-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural, functional, and genetic analysis of sorangicin inhibition of bacterial RNA polymerase Embo J., 24, 2005
7B5L	Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: NEDD8-CUL1-RBX1-SKP1-SKP2-CKSHS1-Cyclin A-CDK2-p27-UBE2L3~Ub~ARIH1. Transition State 1 分子名称: 5-azanylpentan-2-one, Cullin-1, Cyclin-A2, ... 著者 Horn-Ghetko, D, Prabu, J.R, Schulman, B.A. 登録日 2020-12-04 公開日 2021-02-10 最終更新日 2021-03-10 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Ubiquitin ligation to F-box protein targets by SCF-RBR E3-E3 super-assembly. Nature, 590, 2021
3LPE	Crystal structure of Spt4/5NGN heterodimer complex from Methanococcus jannaschii 分子名称: DNA-directed RNA polymerase subunit E'', Putative transcription antitermination protein nusG, ZINC ION 著者 Hirtreiter, A, Damsma, G.E, Cheung, A.C.M, Klose, D, Grohmann, D, Vojnic, E, Martin, A.C.R, Cramer, P, Werner, F. 登録日 2010-02-05 公開日 2010-03-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif. Nucleic Acids Res., 38, 2010

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