PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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6F4Z	2'F-araG modified quadruplex with flipped G-tract and central tetrad 分子名称: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*(GFL)P*GP*GP*AP*CP*GP*GP*G)-3') 著者 Dickerhoff, J, Weisz, K. 登録日 2017-11-30 公開日 2018-04-25 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Fluorine-Mediated Editing of a G-Quadruplex Folding Pathway. Chembiochem, 19, 2018
4B35	Humanised monomeric RadA in complex with 4-methylester indole 分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, PHOSPHATE ION, methyl 1H-indole-4-carboxylate 著者 Scott, D.E, Ehebauer, M.T, Pukala, T, Marsh, M, Blundell, T.L, Venkitaraman, A.R, Abell, C, Hyvonen, M. 登録日 2012-07-20 公開日 2013-02-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Using a Fragment-Based Approach to Target Protein-Protein Interactions. Chembiochem, 14, 2013
4B3B	Humanised monomeric RadA in complex with FHTA tetrapeptide 分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHTA TETRAPEPTIDE, PHOSPHATE ION 著者 Scott, D.E, Ehebauer, M.T, Pukala, T, Marsh, M, Blundell, T.L, Venkitaraman, A.R, Abell, C, Hyvonen, M. 登録日 2012-07-23 公開日 2013-02-27 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.193 Å) 主引用文献 Using a Fragment-Based Approach to Target Protein-Protein Interactions. Chembiochem, 14, 2013
8USP	Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway 分子名称: DNA repair/transcription protein MET18/MMS19 著者 Vasquez, S, Drennan, C.L. 登録日 2023-10-28 公開日 2023-12-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway. Commun Biol, 6, 2023
8USQ	Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway 分子名称: DNA repair/transcription protein MET18/MMS19 著者 Vasquez, S, Drennan, C.L. 登録日 2023-10-29 公開日 2023-12-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (12.77 Å) 主引用文献 Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway. Commun Biol, 6, 2023
4B32	Humanised monomeric RadA in complex with napht-1-ol 分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, PHOSPHATE ION, naphthalen-2-ol 著者 Scott, D.E, Ehebauer, M.T, Pukala, T, Marsh, M, Blundell, T.L, Venkitaraman, A.R, Abell, C, Hyvonen, M. 登録日 2012-07-20 公開日 2013-02-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Using a Fragment-Based Approach to Target Protein-Protein Interactions. Chembiochem, 14, 2013
3AUZ	Crystal structure of Mre11 with manganese 分子名称: DNA double-strand break repair protein mre11, GLYCEROL, MANGANESE (II) ION 著者 Park, Y.B, Cho, Y. 登録日 2011-02-18 公開日 2011-05-25 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.206 Å) 主引用文献 Crystal Structure of the Mre11-Rad50-ATP S Complex: Understanding the Interplay between Mre11 and Rad50 To be Published
3BO4	A relaxed active site following exon ligation by a group I intron 分子名称: DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*A)-D(P*DG)-3'), DNA/RNA (5'-R(*CP*A)-D(P*DU)-R(P*AP*CP*GP*GP*CP*C)-3'), Group I intron P9, ... 著者 Lipchock, S.V, Strobel, S.A. 登録日 2007-12-17 公開日 2008-04-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.33 Å) 主引用文献 A relaxed active site after exon ligation by the group I intron Proc.Natl.Acad.Sci.Usa, 105, 2008
7VCK	NMR solution structures of a hairpin formed by GGCCTG repeats 分子名称: DNA (5'-D(*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*G)-3'), SODIUM ION 著者 Yi, J, Wan, L, Guo, P. 登録日 2021-09-03 公開日 2022-02-02 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR solution structures of d(GGCCTG)n repeats associated with spinocerebellar ataxia type 36. Int.J.Biol.Macromol., 201, 2022
8ABD	Solution structure of Phen-DC3 intercalating into a quadruplex-duplex hybrid 分子名称: DNA (36-MER), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide 著者 Vianney, Y.M, Weisz, K. 登録日 2022-07-04 公開日 2022-11-02 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 High-affinity binding at quadruplex-duplex junctions: rather the rule than the exception. Nucleic Acids Res., 50, 2022
6J99	Cryo-EM structure of human DOT1L in complex with an H2B-monoubiquitinated nucleosome 分子名称: DNA (144-MER), DNA (145-MER), Histone H2A, ... 著者 Yao, T, Huang, J. 登録日 2019-01-22 公開日 2019-02-27 最終更新日 2019-04-10 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural basis of the crosstalk between histone H2B monoubiquitination and H3 lysine 79 methylation on nucleosome. Cell Res., 29, 2019
2KD1	Solution NMR structure of the integrase-like domain from Bacillus cereus ordered locus BC_1272. Northeast Structural Genomics Consortium Target BcR268F 分子名称: DNA integration/recombination/invertion protein 著者 Rossi, P, Lee, H, Maglaqui, M, Foote, E.L, Buchwald, W.A, Jiang, M, Swapna, G.V.T, Nair, R, Xiao, R, Acton, T.B, Rost, B, Prestegard, J.H, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2008-12-31 公開日 2009-01-20 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution NMR Structure of the Integrase-Like Domain from Bacillus cereus Ordered Locus BC_1272. Northeast Structural Genomics Consortium Target BcR268F. To be Published
6K3X	G-quadruplex complex with linear dinucleotide d(AG) 分子名称: DNA (5'-D(*AP*G)-3'), DNA (5'-D(*TP*TP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3') 著者 Winnerdy, F.R, Heddi, B, Phan, A.T. 登録日 2019-05-22 公開日 2020-01-15 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution Structures of a G-Quadruplex Bound to Linear- and Cyclic-Dinucleotides. J.Am.Chem.Soc., 141, 2019
2LSI	Solution structure of polymerase-interacting domain of human Rev1 in complex with translesional synthesis polymerase kappa 分子名称: DNA polymerase kappa, DNA repair protein REV1 著者 Liu, D, Ryu, K, Ko, J, Choi, B. 登録日 2012-05-01 公開日 2013-05-29 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Insights into the scaffold mechanism of human Rev1 in translesional synthesis revealed by the structural studies on its polymerase-interacting domain To be Published
3TOK	Assaying the energies of biological halogen bonds. 分子名称: DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*TP*CP*GP*G)-3'), SODIUM ION 著者 Carter, M, Ho, P.S. 登録日 2011-09-05 公開日 2012-08-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Assaying the Energies of Biological Halogen Bonds CRYST.GROWTH DES., 11, 2011
2LOD	Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops 分子名称: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*GP*AP*CP*GP*GP*G)-3') 著者 Marusic, M, Sket, P, Bauer, L, Viglasky, V, Plavec, J. 登録日 2012-01-23 公開日 2012-05-30 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops. Nucleic Acids Res., 40, 2012
7ZEM	Structure of a parallel G-quadruplex with a snapback loop 分子名称: DNA (5'-D(*(DT5)P*GP*GP*CP*TP*AP*GP*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3') 著者 Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K. 登録日 2022-03-31 公開日 2022-06-15 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Guiding the folding of G-quadruplexes through loop residue interactions. Nucleic Acids Res., 50, 2022
7ZEO	Structure of a hybrid-type G-quadruplex with a snapback loop and an all-syn G-column (hybrid-1R) 分子名称: DNA (5'-D(*(DG5)P*(BGM)P*CP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3') 著者 Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K. 登録日 2022-03-31 公開日 2022-06-15 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Guiding the folding of G-quadruplexes through loop residue interactions. Nucleic Acids Res., 50, 2022
7ZEK	Structure of a hybrid-type G-quadruplex with a snapback loop (hybrid 1R') 分子名称: DNA (5'-D(*(DG5)P*GP*CP*TP*AP*(BG)P*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3') 著者 Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K. 登録日 2022-03-31 公開日 2022-06-22 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Guiding the folding of G-quadruplexes through loop residue interactions. Nucleic Acids Res., 50, 2022
105D	SOLUTION STRUCTURES OF THE I-MOTIF TETRAMERS OF D(TCC), D(5MCCT) AND D(T5MCC). NOVEL NOE CONNECTIONS BETWEEN AMINO PROTONS AND SUGAR PROTONS 分子名称: DNA (5'-D(*TP*CP*C)-3') 著者 Leroy, J.-L, Gueron, M. 登録日 1994-12-22 公開日 1995-02-07 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structures of the i-motif tetramers of d(TCC), d(5methylCCT) and d(T5methylCC): novel NOE connections between amino protons and sugar protons. Structure, 3, 1995
106D	Solution structures of the i-motif tetramers of D(TCC), D(5MCCT) and D(T5MCC). Novel NOE connections between amino protons and sugar protons 分子名称: DNA (5'-D(*MCYP*CP*T)-3') 著者 Leroy, J.-L, Gueron, M. 登録日 1994-12-22 公開日 1995-02-07 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structures of the i-motif tetramers of d(TCC), d(5methylCCT) and d(T5methylCC): novel NOE connections between amino protons and sugar protons. Structure, 3, 1995
1NEV	A-tract decamer 分子名称: 5'-D(*CP*CP*GP*TP*TP*TP*TP*GP*CP*C)-3', 5'-D(*GP*GP*CP*AP*AP*AP*AP*CP*GP*G)-3' 著者 Barbic, A, Zimmer, D.P, Crothers, D.M. 登録日 2002-12-11 公開日 2003-03-11 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural origins of adenine-tract bending Proc.Natl.Acad.Sci.USA, 100, 2003
179D	SOLUTION STRUCTURE OF THE D(T-C-G-A) DUPLEX AT ACIDIC PH: A PARALLEL-STRANDED HELIX CONTAINING C+.C, G.G AND A.A PAIRS 分子名称: DNA (5'-D(*TP*CP*GP*A)-3') 著者 Wang, Y, Patel, D.J. 登録日 1994-06-15 公開日 1994-07-31 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the d(T-C-G-A) duplex at acidic pH. A parallel-stranded helix containing C+ .C, G.G and A.A pairs. J.Mol.Biol., 242, 1994
8EDJ	Crystal structure of rA3G-ssRNA-GA 分子名称: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(P*UP*GP*AP*UP*UP*U)-3'), SULFATE ION, ... 著者 Pacheco, J, Yang, H.J, Li, S.-X, Chen, X.S. 登録日 2022-09-04 公開日 2023-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G. Nat Commun, 13, 2022
5C3I	Crystal structure of the quaternary complex of histone H3-H4 heterodimer with chaperone ASF1 and the replicative helicase subunit MCM2 分子名称: DNA replication licensing factor MCM2,MCM2, Histone H3.1, Histone H4, ... 著者 Wang, H, Wang, M, Yang, N, Xu, R.M. 登録日 2015-06-17 公開日 2015-07-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structure of the quaternary complex of histone H3-H4 heterodimer with chaperone ASF1 and the replicative helicase subunit MCM2 Protein Cell, 6, 2015

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