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8IME
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Human cGAS catalytic domain bound with baicalin
分子名称: 5,6-dihydroxy-4-oxo-2-phenyl-4H-chromen-7-yl beta-D-glucopyranosiduronic acid, Cyclic GMP-AMP synthase, ZINC ION
著者Zhao, W.F, Xu, Y.C.
登録日2023-03-06
公開日2024-01-03
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Discovery of novel cGAS inhibitors based on natural flavonoids.
Bioorg.Chem., 140, 2023
8IMG
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BU of 8img by Molmil
Human cGAS catalytic domain bound with C20
分子名称: 2-[2-hydroxy-2-oxoethyl-[3-(7-methoxy-4-methyl-2-oxidanylidene-chromen-3-yl)propanoyl]amino]ethanoic acid, Cyclic GMP-AMP synthase, ZINC ION
著者Zhao, W.F, Li, J.M, Xu, Y.C.
登録日2023-03-06
公開日2024-01-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery of novel cGAS inhibitors based on natural flavonoids.
Bioorg.Chem., 140, 2023
6IDP
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Crystal structure of Vibrio cholerae MATE transporter VcmN in the straight form
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
6IDR
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Crystal structure of Vibrio cholerae MATE transporter VcmN in the bent form
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
8CHO
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BU of 8cho by Molmil
CRYSTAL STRUCTURE OF DELTA5-3-KETOSTEROID ISOMERASE FROM PSEUDOMONAS TESTOSTERONI
分子名称: O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL, STEROID DELTA-ISOMERASE
著者Cho, H.-S, Oh, B.-H.
登録日1998-01-06
公開日1999-02-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure and enzyme mechanism of Delta 5-3-ketosteroid isomerase from Pseudomonas testosteroni.
Biochemistry, 37, 1998
6J79
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Fusion protein of heme oxygenase-1 and NADPH-cytochrome P450 reductase (13aa)
分子名称: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, Heme oxygenase 1,NADPH--cytochrome P450 reductase, ...
著者Sugishima, M, Wada, K.
登録日2019-01-17
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.331 Å)
主引用文献Crystal structure of a NADPH-cytochrome P450 oxidoreductase (CYPOR) and heme oxygenase 1 fusion protein implies a conformational change in CYPOR upon NADPH/NADP+binding.
Febs Lett., 593, 2019
8J6K
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BU of 8j6k by Molmil
Crystal structure of pro-interleukin-18 and caspase-4 complex
分子名称: Arginine ADP-riboxanase OspC3, Caspase-4 subunit p10, Caspase-4 subunit p20, ...
著者Sun, Q, Hou, Y.J, Ding, J.
登録日2023-04-26
公開日2023-11-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Recognition and maturation of IL-18 by caspase-4 noncanonical inflammasome.
Nature, 624, 2023
6J7A
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Fusion protein of heme oxygenase-1 and NADPH cytochrome P450 reductase (17aa)
分子名称: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, Heme oxygenase 1,NADPH--cytochrome P450 reductase, ...
著者Sugishima, M, Sato, H, Wada, K, Yamamoto, K.
登録日2019-01-17
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.269 Å)
主引用文献Crystal structure of a NADPH-cytochrome P450 oxidoreductase (CYPOR) and heme oxygenase 1 fusion protein implies a conformational change in CYPOR upon NADPH/NADP+binding.
Febs Lett., 593, 2019
7BUM
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mcGAS bound with pGpA
分子名称: ADENOSINE MONOPHOSPHATE, Cyclic GMP-AMP synthase, GUANOSINE-5'-MONOPHOSPHATE, ...
著者Wang, B, Su, X.D.
登録日2020-04-07
公開日2020-09-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.047 Å)
主引用文献Mn2+Directly Activates cGAS and Structural Analysis Suggests Mn2+Induces a Noncanonical Catalytic Synthesis of 2'3'-cGAMP.
Cell Rep, 32, 2020
6J7I
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BU of 6j7i by Molmil
Fusion protein of heme oxygenase-1 and NADPH cytochrome P450 reductase (15aa)
分子名称: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, Heme oxygenase 1,NADPH--cytochrome P450 reductase, ...
著者Sugishima, M, Sato, H, Wada, K, Yamamoto, K.
登録日2019-01-18
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of a NADPH-cytochrome P450 oxidoreductase (CYPOR) and heme oxygenase 1 fusion protein implies a conformational change in CYPOR upon NADPH/NADP+binding.
Febs Lett., 593, 2019
7C0M
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BU of 7c0m by Molmil
Human cGAS-nucleosome complex
分子名称: Cyclic GMP-AMP synthase, DNA (145-MER), Histone H2A type 1-B/E, ...
著者Kujirai, T, Zierhut, C, Takizawa, Y, Kim, R, Negishi, L, Uruma, N, Hirai, S, Funabiki, H, Kurumizaka, H.
登録日2020-05-01
公開日2020-09-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis for the inhibition of cGAS by nucleosomes.
Science, 370, 2020
7BUQ
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BU of 7buq by Molmil
mcGAS bound with 23-cGAMP
分子名称: Cyclic GMP-AMP synthase, ZINC ION, cGAMP
著者Wang, B, Su, X.D.
登録日2020-04-07
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.091 Å)
主引用文献Mn2+Directly Activates cGAS and Structural Analysis Suggests Mn2+Induces a Noncanonical Catalytic Synthesis of 2'3'-cGAMP.
Cell Rep, 32, 2020
6JO7
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BU of 6jo7 by Molmil
Crystal structure of mouse MXRA8
分子名称: Matrix remodeling-associated protein 8
著者Song, H, Zhao, Z, Qi, J, Gao, F, Gao, G.F.
登録日2019-03-20
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular Basis of Arthritogenic Alphavirus Receptor MXRA8 Binding to Chikungunya Virus Envelope Protein.
Cell, 177, 2019
7P01
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BU of 7p01 by Molmil
Structure of the maltase BaAG2 from Blastobotrys adeninivorans in complex with acarbose
分子名称: 1-methylpyrrolidin-2-one, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, BaAG2, ...
著者Ernits, K, Visnapuu, T, Persson, K.
登録日2021-06-29
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structural Insight into a Yeast Maltase-The Ba AG2 from Blastobotrys adeninivorans with Transglycosylating Activity.
J Fungi (Basel), 7, 2021
7P07
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BU of 7p07 by Molmil
Structure of the maltase BaAG2 from Blastobotrys adeninivorans in complex with glucose
分子名称: 1-methylpyrrolidin-2-one, BaAG2, CALCIUM ION, ...
著者Ernits, K, Visnapuu, T, Persson, K.
登録日2021-06-29
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structural Insight into a Yeast Maltase-The Ba AG2 from Blastobotrys adeninivorans with Transglycosylating Activity.
J Fungi (Basel), 7, 2021
8GYO
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BU of 8gyo by Molmil
Inner channel lipids regulated gating mechanism of human pannexins.
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Digitonin, ...
著者Cong, Y, Jin, X, Kong, F, Yan, C.
登録日2022-09-23
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Inner channel lipids regulated gating mechanism of human pannexins.
To Be Published
8GYQ
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Cryo-EM structure of human Pannexin-2 in pre-open state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pannexin-2
著者Cong, Y, Jin, X, Kong, F, Yan, C.
登録日2022-09-23
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Inner channel lipids regulated gating mechanism of human pannexins.
To Be Published
6H8M
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BU of 6h8m by Molmil
Crystal structure of the third SRCR domain of Murine Neurotrypsin.
分子名称: Neurotrypsin
著者Canciani, A, Forneris, F.
登録日2018-08-02
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural characterization of the third scavenger receptor cysteine-rich domain of murine neurotrypsin.
Protein Sci., 28, 2019
8PPG
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Human inositol 1,4,5-trisphosphate 3-kinase A (IP3K) catalytic domain in complex with beta-D-glucopyranosyl 1,3,4,6-tetrakisphosphate/ADP/Mn after reaction
分子名称: ADENOSINE-5'-DIPHOSPHATE, Inositol-trisphosphate 3-kinase A, MANGANESE (II) ION, ...
著者Marquez-Monino, M.A, Gonzalez, B.
登録日2023-07-07
公開日2024-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Substrate promiscuity of inositol 1,4,5-trisphosphate kinase driven by structurally-modified ligands and active site plasticity.
Nat Commun, 15, 2024
8PPE
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Human inositol 1,4,5-trisphosphate 3-kinase A (IP3K) catalytic domain in complex with DL-6-deoxy-6-phosphoryloxymethyl-scyllo-inositol 1,2,4-trisphosphate/ADP/Mn
分子名称: ADENOSINE-5'-DIPHOSPHATE, DL-6-deoxy-6-phosphoryloxymethyl-scyllo-inositol 1,2,4-trisphosphate, GLYCEROL, ...
著者Marquez-Monino, M.A, Gonzalez, B.
登録日2023-07-07
公開日2024-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Substrate promiscuity of inositol 1,4,5-trisphosphate kinase driven by structurally-modified ligands and active site plasticity.
Nat Commun, 15, 2024
8PPB
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Human inositol 1,4,5-trisphosphate 3-kinase A (IP3K) catalytic domain in complex with D-3-deoxy-myo-inositol 1,4,6-trisphosphate/ATP/Mn
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-3-deoxy-myo-inositol 1,4,6-trisphosphate, Inositol-trisphosphate 3-kinase A, ...
著者Marquez-Monino, M.A, Gonzalez, B.
登録日2023-07-07
公開日2024-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Substrate promiscuity of inositol 1,4,5-trisphosphate kinase driven by structurally-modified ligands and active site plasticity.
Nat Commun, 15, 2024
8PP9
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Human inositol 1,4,5-trisphosphate 3-kinase A (IP3K) catalytic domain in complex with scyllo-inositol 1,2,3,5-tetrakisphosphate/ADP/Mn
分子名称: ADENOSINE-5'-DIPHOSPHATE, Inositol-trisphosphate 3-kinase A, MANGANESE (II) ION, ...
著者Marquez-Monino, M.A, Gonzalez, B.
登録日2023-07-07
公開日2024-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Substrate promiscuity of inositol 1,4,5-trisphosphate kinase driven by structurally-modified ligands and active site plasticity.
Nat Commun, 15, 2024
8PPC
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Human inositol 1,4,5-trisphosphate 3-kinase A (IP3K) catalytic domain in complex with L-chiro-inositol 2,3,5-trisphosphate/ATP/Mn
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Inositol-trisphosphate 3-kinase A, L-chiro-inositol 2,3,5-trisphosphate, ...
著者Marquez-Monino, M.A, Gonzalez, B.
登録日2023-07-07
公開日2024-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Substrate promiscuity of inositol 1,4,5-trisphosphate kinase driven by structurally-modified ligands and active site plasticity.
Nat Commun, 15, 2024
8PPA
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Human inositol 1,4,5-trisphosphate 3-kinase A (IP3K) catalytic domain in complex with D-myo-inositol 1,4,6-trisphosphate/AMP-PNP/Mn
分子名称: D-myo-inositol 1,4,6-trisphosphate, Inositol-trisphosphate 3-kinase A, MANGANESE (II) ION, ...
著者Marquez-Monino, M.A, Gonzalez, B.
登録日2023-07-07
公開日2024-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Substrate promiscuity of inositol 1,4,5-trisphosphate kinase driven by structurally-modified ligands and active site plasticity.
Nat Commun, 15, 2024
8PP8
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Human inositol 1,4,5-trisphosphate 3-kinase A (IP3K) catalytic domain in complex with L-scyllo-inositol 1,2,4-trisphosphate/AMP-PNP/Mn
分子名称: Inositol-trisphosphate 3-kinase A, L-scyllo-inositol 1,2,4-trisphosphate, MANGANESE (II) ION, ...
著者Marquez-Monino, M.A, Gonzalez, B.
登録日2023-07-07
公開日2024-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Substrate promiscuity of inositol 1,4,5-trisphosphate kinase driven by structurally-modified ligands and active site plasticity.
Nat Commun, 15, 2024

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