PDB: 41646 件ウェブページステータス検索Chemie searchBIRD

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3K6D	Crystal structure of Xenopus laevis T-cadherin EC1 分子名称: T-cadherin, ZINC ION 著者 Shapiro, L, Ciatto, C. 登録日 2009-10-08 公開日 2010-03-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 T-cadherin structures reveal a novel adhesive binding mechanism Nat.Struct.Mol.Biol., 17, 2010
4YV5	Crystal Structure of Myotoxin II from Bothrops moojeni complexed to Suramin 分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, Basic phospholipase A2 homolog 2, ... 著者 Salvador, G.H.M, Fontes, M.R.M. 登録日 2015-03-19 公開日 2015-10-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and functional evidence for membrane docking and disruption sites on phospholipase A2-like proteins revealed by complexation with the inhibitor suramin. Acta Crystallogr. D Biol. Crystallogr., 71, 2015
5N9U	Dehydroascorbate reductase 3A from Populus trichocarpa complexed with GSH. 分子名称: Dehydroascorbate reductase family protein, GLUTATHIONE 著者 Roret, T, Tsan, P. 登録日 2017-02-27 公開日 2017-03-08 最終更新日 2019-05-08 実験手法 SOLUTION NMR 主引用文献 Insights into ascorbate regeneration in plants: investigating the redox and structural properties of dehydroascorbate reductases from Populus trichocarpa. Biochem.J., 473, 2016
6XF8	DLP 5 fold 分子名称: Inner capsid protein lambda-1, Inner capsid protein sigma-2, Outer capsid protein mu-1, ... 著者 Sutton, G, Sun, D.P, Fu, X.F, Kotecha, A, Hecksel, G.W, Clare, D.K, Zhang, P, Stuart, D, Boyce, M. 登録日 2020-06-15 公開日 2020-09-23 実験手法 ELECTRON MICROSCOPY (6.5 Å) 主引用文献 Assembly intermediates of orthoreovirus captured in the cell. Nat Commun, 11, 2020
7JX6	STRUCTURE OF THE SARS-CoV-2 ORF8 ENCODED ACCESSORY PROTEIN 分子名称: ORF8 protein, SODIUM ION 著者 Hall, P.D, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2020-08-26 公開日 2020-09-23 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Crystal Structure of the SARS-CoV-2 ORF8 Protein To Be Published
7BLR	Vps35/Vps29 arch of fungal membrane-assembled retromer:Vps5 (SNX-BAR) complex. 分子名称: Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35 著者 Leneva, N, Kovtun, O, Morado, D.R, Briggs, J.A.G, Owen, D.J. 登録日 2021-01-18 公開日 2021-02-10 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (9.3 Å) 主引用文献 Architecture and mechanism of metazoan retromer:SNX3 tubular coat assembly. Sci Adv, 7, 2021
4YMH	Crystal structure of SAH-bound Podospora anserina methyltransferase PaMTH1 分子名称: DI(HYDROXYETHYL)ETHER, Putative SAM-dependent O-methyltranferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 Kudlinzki, D, Linhard, V.L, Chatterjee, D, Saxena, K, Sreeramulu, S, Schwalbe, H. 登録日 2015-03-06 公開日 2015-05-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.876 Å) 主引用文献 Structure and Biophysical Characterization of the S-Adenosylmethionine-dependent O-Methyltransferase PaMTH1, a Putative Enzyme Accumulating during Senescence of Podospora anserina. J.Biol.Chem., 290, 2015
7BLP	Vps35/Vps29 arch of fungal membrane-assembled retromer:Grd19 complex 分子名称: Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35 著者 Leneva, N, Kovtun, O, Morado, D.R, Briggs, J.A.G, Owen, D.J. 登録日 2021-01-18 公開日 2021-02-10 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (9.5 Å) 主引用文献 Architecture and mechanism of metazoan retromer:SNX3 tubular coat assembly. Sci Adv, 7, 2021
7OFU	Structure of SARS-CoV-2 Papain-like protease PLpro in complex with 3, 4-Dihydroxybenzoic acid, methyl ester 分子名称: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ... 著者 Srinivasan, V, Ewert, W, Werner, N, Falke, S, Guenther, S, Reinke, P, Sprenger, J, Brognaro, H, Ullah, N, Andaleeb, H, Perbandt, M, Alves Franca, B, Schwinzer, M, Wang, M, Wolf, M, Lieske, J, Koua, F, Ginn, H, Lane, T.J, Yefanov, O, Gelisio, L, Hakanpaeae, J, Saouane, S, Tolstikova, A, Groessler, M, Fleckenstein, H, Trost, F, Lorenzen, K, Schubert, R, Han, H, Schmidt, C, Brings, L, Galchenkova, M, Gevorkov, Y, Li, C, Perk, A, Awel, S, Wahab, A, Choudary, I, Turk, D, Hinrichs, W, Chapman, H.N, Meents, A, Betzel, C. 登録日 2021-05-05 公開日 2021-05-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Antiviral activity of natural phenolic compounds in complex at an allosteric site of SARS-CoV-2 papain-like protease. Commun Biol, 5, 2022
6BRG	The SAM domain of mouse SAMHD1 is critical for its activation and regulation 分子名称: Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, MAGNESIUM ION 著者 Buzovetsky, O, Tang, C, Knecht, K.M, Antonucci, J.M, Wu, L, Ji, X, Xiong, Y. 登録日 2017-11-30 公開日 2018-02-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 The SAM domain of mouse SAMHD1 is critical for its activation and regulation. Nat Commun, 9, 2018
7OFS	Structure of SARS-CoV-2 Papain-like protease PLpro in complex with 4-(2-hydroxyethyl)phenol 分子名称: 4-(2-hydroxyethyl)phenol, CHLORIDE ION, GLYCEROL, ... 著者 Srinivasan, V, Werner, N, Falke, S, Guenther, S, Reinke, P, Ewert, W, Sprenger, J, Koua, F, Brognaro, H, Ullah, N, Andaleeb, H, Perbandt, M, Alves Franca, B, Schwinzer, M, Wang, M, Lieske, J, Ginn, H, Lane, T.J, Yefanov, O, Gelisio, L, Hakanpaeae, J, Saouane, S, Tolstikova, A, Groessler, M, Fleckenstein, H, Trost, F, Wolf, M, Lorenzen, K, Schubert, R, Han, H, Schmidt, C, Brings, L, Galchenkova, M, Gevorkov, Y, Li, C, Perk, A, Awel, S, Wahab, A, Choudary, I, Turk, D, Hinrichs, W, Chapman, H.N, Meents, A, Betzel, C. 登録日 2021-05-05 公開日 2021-05-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Antiviral activity of natural phenolic compounds in complex at an allosteric site of SARS-CoV-2 papain-like protease. Commun Biol, 5, 2022
8CXH	Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy 分子名称: Ankyrin repeat family A protein 2,Envelope E protein, C10 heavy chain, C10 light chain, ... 著者 Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H. 登録日 2022-05-21 公開日 2023-06-07 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy To Be Published
6Z22	Crystal structure of deacylation mutant KPC-4 (E166Q) 分子名称: Beta-lactamase, GLYCEROL, SULFATE ION 著者 Tooke, C.L, Hinchliffe, P, Spencer, J. 登録日 2020-05-14 公開日 2020-12-23 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Natural variants modify Klebsiella pneumoniae carbapenemase (KPC) acyl-enzyme conformational dynamics to extend antibiotic resistance. J.Biol.Chem., 296, 2020
7OFT	Structure of SARS-CoV-2 Papain-like protease PLpro in complex with p-hydroxybenzaldehyde 分子名称: CHLORIDE ION, P-HYDROXYBENZALDEHYDE, POTASSIUM ION, ... 著者 Srinivasan, V, Werner, N, Falke, S, Guenther, S, Reinke, P, Brognaro, H, Ullah, N, Andaleeb, H, Perbandt, M, Alves Franca, B, Schwinzer, M, Wang, M, Ewert, W, Sprenger, J, Lieske, J, Koua, F, Ginn, H, Lane, T.J, Wolf, M, Yefanov, O, Gelisio, L, Saouane, S, Tolstikova, A, Groessler, M, Fleckenstein, H, Trost, F, Lorenzen, K, Schubert, R, Han, H, Schmidt, C, Brings, L, Galchenkova, M, Gevorkov, Y, Li, C, Perk, A, Awel, S, Wahab, A, Choudary, I, Turk, D, Hinrichs, W, Chapman, H.N, Meents, A, Betzel, C. 登録日 2021-05-05 公開日 2021-05-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Antiviral activity of natural phenolic compounds in complex at an allosteric site of SARS-CoV-2 papain-like protease. Commun Biol, 5, 2022
7ZLQ	Crystal structure of ADAR1-dsRBD3 dimer in complex with dsRNA 分子名称: Double-stranded RNA-specific adenosine deaminase, RNA (5'-R(*CP*GP*AP*AP*GP*CP*CP*UP*UP*CP*GP*CP*G)-3') 著者 Mboukou, A, Barraud, P. 登録日 2022-04-15 公開日 2023-10-25 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Dimerization of ADAR1 modulates site-specificity of RNA editing Biorxiv, 2023
7BLN	VPS35/VPS29 arch of metazoan membrane-assembled retromer:SNX3 complex modelled with human proteins 分子名称: Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35 著者 Leneva, N, Kovtun, O, Morado, D.R, Briggs, J.A.G, Owen, D.J. 登録日 2021-01-18 公開日 2021-02-10 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (8.9 Å) 主引用文献 Architecture and mechanism of metazoan retromer:SNX3 tubular coat assembly. Sci Adv, 7, 2021
7ZJ1	Crystal structure of ADAR1-dsRBD3 dimer 分子名称: Double-stranded RNA-specific adenosine deaminase 著者 Mboukou, A, Barraud, P. 登録日 2022-04-08 公開日 2023-10-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Dimerization of ADAR1 modulates site-specificity of RNA editing Biorxiv, 2023
6YUZ	Homodimeric structure of the rBAT complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neutral and basic amino acid transport protein rBAT 著者 Wu, D, Safarian, S, Michel, H. 登録日 2020-04-27 公開日 2021-01-20 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural basis for amino acid exchange by a human heteromeric amino acid transporter. Proc.Natl.Acad.Sci.USA, 117, 2020
3Q37	Identification of Amino Acids that Account for Long-Range Interactions in Proteins Using Two Triosephosphate Isomerases from Pathogenic Trypanosomes. 分子名称: TIM from Trypanosoma cruzi/ TIM from Trypanosoma brucei brucei chimera protein 著者 Garcia-Torres, I, Cabrera, N, Torres-Larios, A, Rodriguez-Bolanos, M, Gomez-Puyou, A, Perez-Montfort, R. 登録日 2010-12-21 公開日 2011-09-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Identification of amino acids that account for long-range interactions in two triosephosphate isomerases from pathogenic trypanosomes. Plos One, 6, 2011
8A5T	Capsid structure of the L-A helper virus from native viral communities 分子名称: Major capsid protein 著者 Schmidt, L, Tueting, C, Stubbs, M.T, Kastritis, P.L. 登録日 2022-06-16 公開日 2023-12-20 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.78 Å) 主引用文献 Delineating organizational principles of the endogenous L-A virus by cryo-EM and computational analysis of native cell extracts. Commun Biol, 7, 2024
7LJM	Structure of the Salmonella enterica CD-NTase CdnD in complex with GTP 分子名称: CD-NTase, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION 著者 Govande, A, Lowey, B, Eaglesham, J.B, Whiteley, A.W, Kranzusch, P.J. 登録日 2021-01-29 公開日 2021-06-02 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Molecular basis of CD-NTase nucleotide selection in CBASS anti-phage defense. Cell Rep, 35, 2021
8CXI	Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy 分子名称: A11 heavy chain, A11 light chain, Ankyrin repeat family A protein 2,Envelope E protein, ... 著者 Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H. 登録日 2022-05-21 公開日 2023-06-07 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy To Be Published
8CXG	Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy 分子名称: Ankyrin repeat family A protein 2,Envelope E protein, C8 scFv heavy chain, C8 scFv light chain, ... 著者 Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H. 登録日 2022-05-21 公開日 2023-06-07 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy To Be Published
7LJL	Structure of the Enterobacter cloacae CD-NTase CdnD in complex with ATP 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-AMP-GMP synthase, ... 著者 Govande, A, Lowey, B, Eaglesham, J.B, Whiteley, A.W, Kranzusch, P.J. 登録日 2021-01-29 公開日 2021-06-02 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Molecular basis of CD-NTase nucleotide selection in CBASS anti-phage defense. Cell Rep, 35, 2021
6ZWB	Z-SBTub3 photoswitch bound to tubulin-DARPin D1 complex 分子名称: 5-[2-(1,3-benzothiazol-2-yl)ethyl]-2-methoxy-phenol, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Wranik, M, Weinert, T, Olieric, N, Gao, L, Kraus, Y.C.M, Bingham, R, Ntouliou, E, Ahlfeld, J, Thorn-Seshold, O, Steinmetz, M.O, Standfuss, J. 登録日 2020-07-28 公開日 2020-12-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.747 Å) 主引用文献 A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton. Cell Chem Biol, 28, 2021

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