Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5UX2
DownloadVisualize
BU of 5ux2 by Molmil
Protein 19 with aldehyde deformylating oxidase activity from Synechococcus
分子名称: Aldehyde decarbonylase, FE (III) ION, PROPANOIC ACID
著者Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2017-02-21
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Protein 19 with aldehyde deformylating oxidase activity from Synechococcus
To Be Published
7PVG
DownloadVisualize
BU of 7pvg by Molmil
Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with isonicotinic acid
分子名称: Cholinephosphate cytidylyltransferase, pyridine-4-carboxylic acid
著者Duclovel, C, Gelin, M, Krimm, I, Cerdan, R, Guichou, J.-F.
登録日2021-10-02
公開日2022-10-05
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design of PfCCT inhibitors
To Be Published
5DOW
DownloadVisualize
BU of 5dow by Molmil
Solution of the Variably-Twinned Structure of a Novel Calmodulin-Peptide Complex in a Novel Configuration
分子名称: CALCIUM ION, CHLORIDE ION, Calmodulin, ...
著者Keller, J.P.
登録日2015-09-11
公開日2016-08-10
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Solution of the structure of a calmodulin-peptide complex in a novel configuration from a variably twinned data set.
Acta Crystallogr D Struct Biol, 73, 2017
6N78
DownloadVisualize
BU of 6n78 by Molmil
Structure of the human JAK1 kinase domain with compound 21
分子名称: GLYCEROL, N-{3-[5-chloro-2-(difluoromethoxy)phenyl]-1-methyl-1H-pyrazol-4-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide, Tyrosine-protein kinase JAK1
著者Lupardus, P.J, Brown, D.
登録日2018-11-27
公開日2019-04-24
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Discovery of a class of highly potent Janus Kinase 1/2 (JAK1/2) inhibitors demonstrating effective cell-based blockade of IL-13 signaling.
Bioorg.Med.Chem.Lett., 29, 2019
8PZ7
DownloadVisualize
BU of 8pz7 by Molmil
crystal structure of VDR complex with D-Bishomo-1a,25-dihydroxyvitamin D3 Analog 57
分子名称: (1~{R},3~{R})-5-[(2~{E})-2-[(4~{a}~{R},5~{R},9~{a}~{S})-4~{a}-methyl-5-[(2~{R})-6-methyl-6-oxidanyl-heptan-2-yl]-3,4,5,8,9,9~{a}-hexahydro-2~{H}-benzo[7]annulen-1-ylidene]ethylidene]-2-methyl-cyclohexane-1,3-diol, Nuclear receptor coactivator 2, Vitamin D3 receptor A
著者Rochel, N.
登録日2023-07-27
公開日2023-08-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Design, synthesis, and biological activity of D-bishomo-1 alpha ,25-dihydroxyvitamin D 3 analogs and their crystal structures with the vitamin D nuclear receptor.
Eur.J.Med.Chem., 271, 2024
7NAI
DownloadVisualize
BU of 7nai by Molmil
Crystal structure of the TIR domain from human SARM1 in complex with 3AD
分子名称: Sterile alpha and TIR motif-containing protein 1, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(8-azanylisoquinolin-2-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Shi, Y, Ve, T.
登録日2021-06-21
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural basis of SARM1 activation, substrate recognition, and inhibition by small molecules.
Mol.Cell, 82, 2022
6N7A
DownloadVisualize
BU of 6n7a by Molmil
Structure of the human JAK1 kinase domain with compound 39
分子名称: GLYCEROL, N-[3-(5-chloro-2-methoxyphenyl)-1-methyl-1H-pyrazol-4-yl]-2-methyl-2H-pyrazolo[4,3-c]pyridine-7-carboxamide, Tyrosine-protein kinase JAK1
著者Lupardus, P.J, Brown, D.
登録日2018-11-27
公開日2019-04-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Discovery of a class of highly potent Janus Kinase 1/2 (JAK1/2) inhibitors demonstrating effective cell-based blockade of IL-13 signaling.
Bioorg.Med.Chem.Lett., 29, 2019
8SM3
DownloadVisualize
BU of 8sm3 by Molmil
Structure of Bacillus cereus VD045 Gabija GajA-GajB Complex
分子名称: Endonuclease GajA, Gabija protein GajB, SULFATE ION
著者Antine, S.P, Mooney, S.E, Johnson, A.G, Kranzusch, P.J.
登録日2023-04-25
公開日2023-11-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of Gabija anti-phage defence and viral immune evasion.
Nature, 625, 2024
7PTG
DownloadVisualize
BU of 7ptg by Molmil
Pseudomonas aeruginosa DNA gyrase B 24kDa ATPase subdomain complexed with EBL2888
分子名称: 2-[[3,4-bis(chloranyl)-5-methyl-1H-pyrrol-2-yl]carbonylamino]-4-[(1S)-1-phenylethoxy]-1,3-benzothiazole-6-carboxylic acid, DNA gyrase subunit B
著者Cotman, A.E, Zega, A, Zidar, N, Ilas, J, Tomasic, T, Masic, L.P, Mundy, J.E.A, Stevenson, C.E.M, Burton, N, Lawson, D.M, Maxwell, A, Kikelj, D.
登録日2021-09-27
公開日2022-10-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery and Hit-to-Lead Optimization of Benzothiazole Scaffold-Based DNA Gyrase Inhibitors with Potent Activity against Acinetobacter baumannii and Pseudomonas aeruginosa.
J.Med.Chem., 66, 2023
5HGP
DownloadVisualize
BU of 5hgp by Molmil
Hexameric HIV-1 CA in complex with hexacarboxybenzene
分子名称: BENZENE HEXACARBOXYLIC ACID, Capsid protein P24
著者Jacques, D.A, James, L.C.
登録日2016-01-08
公開日2016-10-19
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献HIV-1 uses dynamic capsid pores to import nucleotides and fuel encapsidated DNA synthesis.
Nature, 536, 2016
8SXS
DownloadVisualize
BU of 8sxs by Molmil
Crystal structure of a Nudix hydrolase effector from Magnaporthe oryzae
分子名称: Nudix hydrolase domain-containing protein
著者McCombe, C.L, Ericsson, D.J, Williams, S.J.
登録日2023-05-23
公開日2023-11-22
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Plant pathogenic fungi hijack phosphate starvation signaling with conserved enzymatic effectors
Biorxiv, 2023
7PJO
DownloadVisualize
BU of 7pjo by Molmil
Crystal form 3 of CPR-C4: a cysteine protease from the Candidate Phyla Radiation
分子名称: CPR-C4, PHOSPHATE ION
著者Cornish, K.A.S, Pohl, E.
登録日2021-08-24
公開日2022-07-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.248 Å)
主引用文献CPR-C4 is a highly conserved novel protease from the Candidate Phyla Radiation with remote structural homology to human vasohibins.
J.Biol.Chem., 298, 2022
5VAL
DownloadVisualize
BU of 5val by Molmil
BRAF in Complex with N-(3-(tert-butyl)phenyl)-4-methyl-3-(6-morpholinopyrimidin-4-yl)benzamide
分子名称: N-(3-tert-butylphenyl)-4-methyl-3-[6-(morpholin-4-yl)pyrimidin-4-yl]benzamide, Serine/threonine-protein kinase B-raf
著者Mamo, M, Appleton, B.A.
登録日2017-03-27
公開日2017-06-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Design and Discovery of N-(2-Methyl-5'-morpholino-6'-((tetrahydro-2H-pyran-4-yl)oxy)-[3,3'-bipyridin]-5-yl)-3-(trifluoromethyl)benzamide (RAF709): A Potent, Selective, and Efficacious RAF Inhibitor Targeting RAS Mutant Cancers.
J. Med. Chem., 60, 2017
7YN3
DownloadVisualize
BU of 7yn3 by Molmil
Crystal structure of CcbD complex with CcbZ carrier protein domain
分子名称: 1,1'-ethane-1,2-diyldipyrrolidine-2,5-dione, 4'-PHOSPHOPANTETHEINE, CcbD, ...
著者Mori, T, Lyu, S, Abe, I.
登録日2022-07-29
公開日2023-08-02
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of CcbD complex with carrier protein
To Be Published
8SMF
DownloadVisualize
BU of 8smf by Molmil
Structure of SPO1 phage Tad2 in complex with 1''-3' gcADPR
分子名称: (2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione, Gp34.65, MAGNESIUM ION
著者Lu, A, Yirmiya, E, Leavitt, A, Avraham, C, Osterman, I, Garb, J, Antine, S.P, Mooney, S.E, Hobbs, S.J, Amitai, G, Sorek, R, Kranzusch, P.J.
登録日2023-04-26
公開日2023-11-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Phages overcome bacterial immunity via diverse anti-defence proteins.
Nature, 625, 2024
7W11
DownloadVisualize
BU of 7w11 by Molmil
glycosyltransferase
分子名称: DIGITOXIGENIN, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE, ...
著者Wei, H, Feng, L.
登録日2021-11-19
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7NNJ
DownloadVisualize
BU of 7nnj by Molmil
Crystal Structure of NUDT4 (Diphosphoinositol polyphosphate phosphohydrolase 2) in complex with 4-O-Bn-1-PCP-InsP4 (AMR2105)
分子名称: 1,2-ETHANEDIOL, Diphosphoinositol polyphosphate phosphohydrolase 2, FORMIC ACID, ...
著者Dubianok, Y, Arruda Bezerra, G, Raux, B, Diaz Saez, L, Riley, A.M, Potter, B.V.L, Huber, K.V.M, von Delft, F.
登録日2021-02-24
公開日2022-03-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.755 Å)
主引用文献Crystal Structure of NUDT4 (Diphosphoinositol polyphosphate phosphohydrolase 2) in complex with 4-O-Bn-1-PCP-InsP4 (AMR2105)
To Be Published
5VAS
DownloadVisualize
BU of 5vas by Molmil
Pekin duck egg lysozyme isoform III (DEL-III), orthorhombic form
分子名称: GLYCEROL, Lysozyme, PHOSPHATE ION
著者Christie, M, Christ, D, Langley, D.B.
登録日2017-03-27
公開日2018-04-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis of antigen recognition: crystal structure of duck egg lysozyme.
Acta Crystallogr D Struct Biol, 73, 2017
5HH5
DownloadVisualize
BU of 5hh5 by Molmil
Crystal structure of B3 metallo-beta-lactamase L1 complexed with a phosphonate-based inhibitor
分子名称: 6-(phosphonomethyl)pyridine-2-carboxylic acid, GLYCEROL, Metallo-beta-lactamase L1, ...
著者Hinchliffe, P, Spencer, J.
登録日2016-01-09
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Kinetic Studies of the Potent Inhibition of Metallo-beta-lactamases by 6-Phosphonomethylpyridine-2-carboxylates.
Biochemistry, 57, 2018
7MUB
DownloadVisualize
BU of 7mub by Molmil
KcsA Open gate E71V mutant in Potassium
分子名称: Fab heavy chain, Fab light chain, POTASSIUM ION, ...
著者Rohaim, A, Li, J, Weingarth, M, Roux, B.
登録日2021-05-14
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
7W09
DownloadVisualize
BU of 7w09 by Molmil
UGT74AN2, Plant Steroid Glycosyltransferase
分子名称: Glycosyltransferase
著者Wei, H, Feng, L.
登録日2021-11-18
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
8PJM
DownloadVisualize
BU of 8pjm by Molmil
Metallo beta-lactamase VIM2 with compound AK110
分子名称: Beta-lactamase VIM-2, CHLORIDE ION, SODIUM ION, ...
著者Lucic, A, Hinchliffe, P, Schofield, C.
登録日2023-06-23
公開日2023-08-16
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Metallo beta-lactamase VIM2 with compound AK110
To Be Published
7YOQ
DownloadVisualize
BU of 7yoq by Molmil
Recj2 and CMP complex from Methanocaldococcus jannaschii
分子名称: [5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)furan-2-yl]methyl dihydrogen phosphate, nuclease RecJ2
著者Wang, W.W, Liu, X.P.
登録日2022-08-02
公開日2023-08-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.265 Å)
主引用文献The structure of nuclease RecJ2 from Methanocaldococcus jannaschii
To Be Published
8VZ4
DownloadVisualize
BU of 8vz4 by Molmil
L54G Mutant of E. coli Dihydrofolate Reductase Complexed with Nicotinamide Adenine Dinucleotide Phosphate (oxidized form)
分子名称: Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Fried, S.D.E, Boxer, S.G.
登録日2024-02-09
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Role of Electrostatics in Hydride Transfer by Dihydrofolate Reductase
To Be Published
7PVF
DownloadVisualize
BU of 7pvf by Molmil
Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with 3-hydroxy-1lambda6-thietane-1,1-dione
分子名称: 1,1-bis(oxidanylidene)thietan-3-ol, Cholinephosphate cytidylyltransferase, Guanidinium
著者Duclovel, C, Gelin, M, Krimm, I, Cerdan, R, Guichou, J.-F.
登録日2021-10-02
公開日2022-10-05
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design of PfCCT inhibitors
To Be Published

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon