PDB: 20558 件ウェブページステータス検索Chemie searchBIRD

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4H5W	HSC70 NBD with betaine 分子名称: ACETATE ION, Heat shock cognate 71 kDa protein, MAGNESIUM ION, ... 著者 Stec, B. 登録日 2012-09-19 公開日 2014-03-19 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 New crystal structures of HSC-70 ATP binding domain confirm the role of individual binding pockets and suggest a new method of inhibition. Biochimie, 108, 2015
3NY2	Structure of the ubr-box of UBR2 ubiquitin ligase 分子名称: E3 ubiquitin-protein ligase UBR2, ZINC ION 著者 Matta-Camacho, E, Kozlov, G, Li, F, Gehring, K. 登録日 2010-07-14 公開日 2010-08-11 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Structural basis of substrate recognition and specificity in the N-end rule pathway. Nat.Struct.Mol.Biol., 17, 2010
3NXE	X-ray structure of ester chemical analogue 'covalent dimer' [Ile50,O-Ile50']HIV-1 protease complexed with MVT-101 inhibitor 分子名称: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, SULFATE ION, protease covalent dimer 著者 Torbeev, V.Y, Kent, S.B.H. 登録日 2010-07-13 公開日 2011-11-02 最終更新日 2012-12-12 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Protein conformational dynamics in the mechanism of HIV-1 protease catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
3NY3	Structure of the ubr-box of UBR2 in complex with N-degron 分子名称: E3 ubiquitin-protein ligase UBR2, N-degron, ZINC ION 著者 Matta-Camacho, E, Kozlov, G, Li, F, Gehring, K. 登録日 2010-07-14 公開日 2010-08-11 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural basis of substrate recognition and specificity in the N-end rule pathway. Nat.Struct.Mol.Biol., 17, 2010
3O2M	Crystal Structure of JNK1-alpha1 isoform complex with a biaryl tetrazol (A-82118) 分子名称: C-Jun-amino-terminal kinase-interacting protein 1, JIP1, 10MER PEPTIDE, ... 著者 Abad-Zapatero, C. 登録日 2010-07-22 公開日 2011-01-12 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Discovery and characterization of non-ATP site inhibitors of the mitogen activated protein (MAP) kinases. Acs Chem.Biol., 6, 2011
3O02	The Crystal Structure of the Salmonella Type III Secretion System Tip Protein SipD in Complex with Chenodeoxycholate 分子名称: CHENODEOXYCHOLIC ACID, Cell invasion protein sipD, NICKEL (II) ION 著者 Chatterjee, S, Zhong, D, Nordhues, B.A, Battaile, K.P, Lovell, S, DeGuzman, R.N. 登録日 2010-07-18 公開日 2010-11-17 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The crystal structures of the Salmonella type III secretion system tip protein SipD in complex with deoxycholate and chenodeoxycholate. Protein Sci., 20, 2011
3NS8	Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Ubiquitin 著者 Zhang, D, LaRonde-LeBlanc, N, Fushman, D. 登録日 2010-07-01 公開日 2011-07-20 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.707 Å) 主引用文献 Structural and biochemical studies of the open state of Lys48-linked diubiquitin. Biochim.Biophys.Acta, 1823, 2012
3OBU	Crystal structure of the Tsg101 UEV domain in complex with a HIV-1 PTAP peptide 分子名称: Gag polyprotein, Tumor susceptibility gene 101 protein 著者 Im, Y.J, Hurley, J.H. 登録日 2010-08-09 公開日 2010-12-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystallographic and Functional Analysis of the ESCRT-I /HIV-1 Gag PTAP Interaction. Structure, 18, 2010
3NXN	X-ray structure of ester chemical analogue 'covalent dimer' [Ile50,O-Ile50']HIV-1 protease complexed with KVS-1 inhibitor 分子名称: N~2~-[(2R,5S)-5-({(2S,3S)-2-[(N-acetyl-L-threonyl)amino]-3-methylpent-4-enoyl}amino)-2-butyl-4,4-dihydroxynonanoyl]-L-glutaminyl-L-argininamide, SULFATE ION, protease covalent dimer 著者 Torbeev, V.Y, Kent, S.B.H. 登録日 2010-07-14 公開日 2011-11-02 最終更新日 2019-07-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Protein conformational dynamics in the mechanism of HIV-1 protease catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
3NYG	X-ray structure of ester chemical analogue [O-Gly51,O-Gly51']HIV-1 protease complexed with MVT-101 inhibitor 分子名称: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, SULFATE ION, protease 著者 Torbeev, V.Y, Kent, S.B.H. 登録日 2010-07-15 公開日 2011-11-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Protein conformational dynamics in the mechanism of HIV-1 protease catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
3O01	The Crystal Structure of the Salmonella Type III Secretion System Tip Protein SipD in Complex with Deoxycholate 分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, Cell invasion protein sipD, NICKEL (II) ION 著者 Chatterjee, S, Zhong, D, Nordhues, B.A, Battaile, K.P, Lovell, S, DeGuzman, R.N. 登録日 2010-07-18 公開日 2010-11-17 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The crystal structures of the Salmonella type III secretion system tip protein SipD in complex with deoxycholate and chenodeoxycholate. Protein Sci., 20, 2011
3NWX	X-ray structure of ester chemical analogue [O-Ile50,O-Ile50']HIV-1 protease complexed with KVS-1 inhibitor 分子名称: N~2~-[(2R,5S)-5-({(2S,3S)-2-[(N-acetyl-L-threonyl)amino]-3-methylpent-4-enoyl}amino)-2-butyl-4,4-dihydroxynonanoyl]-L-glutaminyl-L-argininamide, SULFATE ION, protease 著者 Torbeev, V.Y, Kent, S.B.H. 登録日 2010-07-12 公開日 2011-11-02 最終更新日 2019-07-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Protein conformational dynamics in the mechanism of HIV-1 protease catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
3OG5	Crystal Structure of BamA POTRA45 tandem 分子名称: Outer membrane protein assembly complex, YaeT protein 著者 Gatzeva-Topalova, P.Z, Warner, L.R, Pardi, A, Sousa, M.C. 登録日 2010-08-16 公開日 2010-11-17 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Structure and Flexibility of the Complete Periplasmic Domain of BamA: The Protein Insertion Machine of the Outer Membrane Structure, 18, 2010
3OY6	The crystal structure of uPA complex with peptide inhibitor MH036 at pH4.6 分子名称: MH036, Urokinase-type plasminogen activator 著者 Jiang, L.G, Andreasen, P.A, Huang, M.D. 登録日 2010-09-22 公開日 2011-08-10 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 The binding mechanism of a peptidic cyclic serine protease inhibitor J.Mol.Biol., 412, 2011
3OY5	The crystal structure of uPA complex with peptide inhibitor MH027 at pH7.4 分子名称: MH027, SULFATE ION, Urokinase-type plasminogen activator 著者 Jiang, L.G, Andreasen, P.A, Huang, M.D. 登録日 2010-09-22 公開日 2011-08-10 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 The binding mechanism of a peptidic cyclic serine protease inhibitor J.Mol.Biol., 412, 2011
3OW9	Structure of an amyloid forming peptide KLVFFA from amyloid beta, alternate polymorph II 分子名称: KLVFFA hexapeptide segment from Amyloid beta 著者 Landau, M, Eisenberg, D. 登録日 2010-09-17 公開日 2011-08-31 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular basis for amyloid-{beta} polymorphism. Proc.Natl.Acad.Sci.USA, 108, 2011
3OVU	Crystal Structure of Human Alpha-Haemoglobin Complexed with AHSP and the First NEAT Domain of IsdH from Staphylococcus aureus 分子名称: Alpha-hemoglobin-stabilizing protein, Hemoglobin subunit alpha, Iron-regulated surface determinant protein H, ... 著者 Jacques, D.A, Krishna Kumar, K, Caradoc-Davies, T.T, Langley, D.B, Mackay, J.P, Guss, J.M, Gell, D.A. 登録日 2010-09-17 公開日 2011-09-21 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.83 Å) 主引用文献 A new haem pocket structure in alpha-haemoglobin To be Published
3OXU	Complement components factor H CCP19-20 and C3d in complex 分子名称: Complement C3, GLYCEROL, HF protein 著者 Morgan, H.P, Schmidt, C.Q, Guariento, M, Gillespie, D, Herbert, A.P, Mertens, H, Blaum, B.S, Svergun, D, Johansson, C.M, Uhrin, D, Barlow, P.N, Hannan, J.P. 登録日 2010-09-22 公開日 2011-02-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis for engagement by complement factor H of C3b on a self surface. Nat.Struct.Mol.Biol., 18, 2011
4FXH	Crystal structure of the isolated E. coli RelE toxin, P212121 form 分子名称: SULFATE ION, mRNA interferase RelE 著者 Brodersen, D.E, Boggild, A, Sofos, N. 登録日 2012-07-03 公開日 2012-08-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity. Structure, 20, 2012
4H5T	HSC70 NBD with ADP and Mg 分子名称: ADENOSINE-5'-DIPHOSPHATE, Heat shock cognate 71 kDa protein, MAGNESIUM ION, ... 著者 Stec, B. 登録日 2012-09-18 公開日 2014-03-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 New crystal structures of HSC-70 ATP binding domain confirm the role of individual binding pockets and suggest a new method of inhibition. Biochimie, 108, 2015
3OPI	7-DEAZA-2'-DEOXYADENOSINE modification in B-FORM DNA 分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*(7DA)P*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, SODIUM ION 著者 Kowal, E.A, Ganguly, M, Pallan, P.S, Marky, L.A, Gold, B, Egli, M, Stone, M.P. 登録日 2010-09-01 公開日 2011-08-31 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Altering the Electrostatic Potential in the Major Groove: Thermodynamic and Structural Characterization of 7-Deaza-2'-deoxyadenosine:dT Base Pairing in DNA. J.Phys.Chem.B, 115, 2011
4H5N	HSC70 NBD with PO4, Na, Cl 分子名称: CHLORIDE ION, GLYCEROL, Heat shock cognate 71 kDa protein, ... 著者 Stec, B. 登録日 2012-09-18 公開日 2014-03-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 New crystal structures of HSC-70 ATP binding domain confirm the role of individual binding pockets and suggest a new method of inhibition. Biochimie, 108, 2015
3ME6	Crystal structure of cytochrome 2B4 in complex with the anti-platelet drug clopidogrel 分子名称: Clopidogrel, Cytochrome P450 2B4, PROTOPORPHYRIN IX CONTAINING FE 著者 Gay, S.C, Roberts, A.G, Maekawa, K, Talakad, J.C, Hong, W.X, Zhang, Q, Stout, C.D, Halpert, J.R. 登録日 2010-03-31 公開日 2010-09-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structures of cytochrome P450 2B4 complexed with the antiplatelet drugs ticlopidine and clopidogrel. Biochemistry, 49, 2010
4IJ4	Crystal Structure of a Family GH19 chitinase from Bryum coronatum in complex with (GlcNAc)4 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A 著者 Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T. 登録日 2012-12-21 公開日 2014-03-26 最終更新日 2022-08-24 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center. Biochim.Biophys.Acta, 1844, 2014
3MCD	Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor 分子名称: Cell division topological specificity factor 著者 Kang, G.B, Song, H.E, Kim, M.K, Youn, H.S, Lee, J.G, An, J.Y, Jeon, H, Chun, J.S, Eom, S.H. 登録日 2010-03-29 公開日 2010-05-05 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor Mol.Microbiol., 76, 2010

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