PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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5AFM	alpha7-AChBP in complex with lobeline and fragment 4 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,5-dibromo-N-(3-hydroxypropyl)-1H-pyrrole-2-carboxamide, ACETYLCHOLINE-BINDING PROTEIN, ... 著者 Spurny, R, Debaveye, S, Farinha, A, Veys, K, Gossas, T, Atack, J, Bertrand, D, Kemp, J, Vos, A, Danielson, U.H, Tresadern, G, Ulens, C. 登録日 2015-01-22 公開日 2015-05-06 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Molecular Blueprint of Allosteric Binding Sites in a Homologue of the Agonist-Binding Domain of the Alpha7 Nicotinic Acetylcholine Receptor. Proc.Natl.Acad.Sci.USA, 112, 2015
6C9Y	Cryo-EM structure of E. coli RNAP sigma70 holoenzyme 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Narayanan, A, Vago, F, Li, K, Qayyum, M.Z, Yenool, D, Jiang, W, Murakami, K.S. 登録日 2018-01-29 公開日 2018-02-28 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4.25 Å) 主引用文献 Cryo-EM structure ofEscherichia colisigma70RNA polymerase and promoter DNA complex revealed a role of sigma non-conserved region during the open complex formation. J. Biol. Chem., 293, 2018
5AFJ	alpha7-AChBP in complex with lobeline and fragment 1 分子名称: (3S)-6-(4-bromophenyl)-3-hydroxy-1,3-dimethyl-2,3-dihydropyridin-4(1H)-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE-BINDING PROTEIN, ... 著者 Spurny, R, Debaveye, S, Farinha, A, Veys, K, Gossas, T, Atack, J, Bertrand, D, Kemp, J, Vos, A, Danielson, U.H, Tresadern, G, Ulens, C. 登録日 2015-01-22 公開日 2015-05-06 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Molecular Blueprint of Allosteric Binding Sites in a Homologue of the Agonist-Binding Domain of the Alpha7 Nicotinic Acetylcholine Receptor. Proc.Natl.Acad.Sci.USA, 112, 2015
6C05	Mycobacterium tuberculosis RNAP Holo/RbpA in relaxed state 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Darst, S.A, Campbell, E.A, Boyaci Selcuk, H, Chen, J, Lilic, M. 登録日 2017-12-27 公開日 2018-03-28 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (5.15 Å) 主引用文献 Fidaxomicin jamsMycobacterium tuberculosisRNA polymerase motions needed for initiation via RbpA contacts. Elife, 7, 2018
2NZ2	Crystal structure of human argininosuccinate synthase in complex with aspartate and citrulline 分子名称: ASPARTIC ACID, Argininosuccinate synthase, CITRULLINE, ... 著者 Karlberg, T, Uppenberg, J, Arrowsmith, C, Berglund, H, Busam, R.D, Collins, R, Edwards, A, Ericsson, U.B, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Hogbom, M, Johansson, I, Kotenyova, T, Magnusdottir, A, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Wallden, K, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC) 登録日 2006-11-22 公開日 2006-12-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of human argininosuccinate synthetase. Acta Crystallogr.,Sect.D, 64, 2008
5D0S	Yeast 20S proteasome beta5-D166N mutant in complex with Carfilzomib 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-08-03 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
6C93	Effects of the E310A Mutation of Cytochrome P450 4B1 (CYP4B1) on n-Octane binding and Heme Ruffling 分子名称: Cytochrome P450 4B1, N-OCTANE, PROTOPORPHYRIN IX CONTAINING FE 著者 Hsu, M.-H, Johnson, E.F. 登録日 2018-01-25 公開日 2018-06-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.674 Å) 主引用文献 Noncovalent interactions dominate dynamic heme distortion in cytochrome P450 4B1. J. Biol. Chem., 293, 2018
6C6T	CryoEM structure of E.coli RNA polymerase elongation complex bound with RfaH 分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Kang, J.Y, Artsimovitch, I, Landick, R, Darst, S.A. 登録日 2018-01-19 公開日 2018-07-25 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators. Cell, 173, 2018
2C7K	Laue structure of phycoerythrocyanin from Mastigocladus laminosus 分子名称: BILIVERDINE IX ALPHA, PHYCOCYANOBILIN, PHYCOERYTHROCYANIN ALPHA CHAIN, ... 著者 Schmidt, M, Krasselt, A, Reuter, W. 登録日 2005-11-24 公開日 2006-01-25 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Local Protein Flexibility as a Prerequisite for Reversible Chromophore Isomerization in Alpha-Phycoerythrocyanin Biochim.Biophys.Acta, 1764, 2006
6BWW	Crystal structure of an acetate and Cymal-5 bound cytochrome P450 2B4 F429H mutant 分子名称: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, ACETATE ION, Cytochrome P450 2B4, ... 著者 Yang, Y.T, Waskell, L. 登録日 2017-12-15 公開日 2018-12-19 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of cytochrome P450 2B4 with an acetate ligand and an active site hydrogen bond network similar to oxyferrous P450cam. J.Inorg.Biochem., 185, 2018
2NWR	Crystal structure of C11N mutant of KDO8P Synthase in complex with PEP 分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, PHOSPHATE ION, PHOSPHOENOLPYRUVATE 著者 Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L. 登録日 2006-11-16 公開日 2007-04-24 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases. Biochemistry, 46, 2007
2NX0	Ferrous nitrosyl blackfin tuna myoglobin 分子名称: Myoglobin, NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Schreiter, E.R, Rodriguez, M.M, Weichsel, A, Montfort, W.R, Bonaventura, J. 登録日 2006-11-16 公開日 2007-05-08 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 S-nitrosylation-induced conformational change in blackfin tuna myoglobin. J.Biol.Chem., 282, 2007
6C6R	Human Squalene Epoxidase (SQLE, Squalene Monooxygenase) structure with FAD 分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Padyana, A.K, Jin, L. 登録日 2018-01-19 公開日 2019-01-16 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure and inhibition mechanism of the catalytic domain of human squalene epoxidase. Nat Commun, 10, 2019
5CZ6	Yeast 20S proteasome beta5-T1A mutant in complex with Syringolin A, propeptide expressed in trans 分子名称: (2S)-2-[[(2S)-1-[[(5S,8S,9E)-2,7-dioxo-5-propan-2-yl-1,6-diazacyclododeca-3,9-dien-8-yl]amino]-3-methyl-1-oxo-butan-2-yl]carbamoylamino]-3-methyl-butanoic acid, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-07-31 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
5D0Q	BamACDE complex, outer membrane beta-barrel assembly machinery (BAM) complex 分子名称: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamC, Outer membrane protein assembly factor BamD, ... 著者 Gu, Y, Paterson, N, Zeng, Y, Dong, H, Wang, W, Dong, C. 登録日 2015-08-03 公開日 2016-03-09 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural basis of outer membrane protein insertion by the BAM complex. Nature, 531, 2016
5DC6	Crystal structure of D176N-Y306F HDAC8 in complex with a tetrapeptide substrate 分子名称: Fluor-de-Lys tetrapeptide assay substrate, GLYCEROL, Histone deacetylase 8, ... 著者 Decroos, C, Lee, M.S, Christianson, D.W. 登録日 2015-08-23 公開日 2016-02-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.553 Å) 主引用文献 General Base-General Acid Catalysis in Human Histone Deacetylase 8. Biochemistry, 55, 2016
5DGD	Benzoylformate decarboxylase F464I and A460V mutant from Pseudomonas putida 分子名称: Benzoylformate decarboxylase, CALCIUM ION, MAGNESIUM ION, ... 著者 Bera, A.K, Hasson, M.S. 登録日 2015-08-27 公開日 2015-09-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.13 Å) 主引用文献 Benzoylformate decarboxylase F464I and A460V mutant from Pseudomonas putida to be published
2P0D	ArhGAP9 PH domain in complex with Ins(1,4,5)P3 分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Rho GTPase-activating protein 9 著者 Ceccarelli, D.F.J, Blasutig, I, Goudreault, M, Ruston, J, Pawson, T, Sicheri, F. 登録日 2007-02-28 公開日 2007-03-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.811 Å) 主引用文献 Non-canonical Interaction of Phosphoinositides with Pleckstrin Homology Domains of Tiam1 and ArhGAP9. J.Biol.Chem., 282, 2007
5CZ8	Yeast 20S proteasome beta5-L(-49)S-K33A mutant in complex with Carfilzomib 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-07-31 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
2OTJ	13-deoxytedanolide bound to the large subunit of Haloarcula marismortui 分子名称: 13-DEOXYTEDANOLIDE, 23S ribosomal RNA, 50S ribosomal protein L10E, ... 著者 Blaha, G, Schroeder, S.J, Tirado-Rives, J. 登録日 2007-02-08 公開日 2007-04-03 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The Structures of Antibiotics Bound to the E Site Region of the 50 S Ribosomal Subunit of Haloarcula marismortui: 13-Deoxytedanolide and Girodazole. J.Mol.Biol., 367, 2007
5D0Z	Yeast 20S proteasome beta5-T1S mutant in complex with Carfilzomib 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-08-03 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
6BHJ	Structure of HIV-1 Reverse Transcriptase Bound to a 38-mer Hairpin Template-Primer RNA-DNA Aptamer 分子名称: 38-MER RNA-DNA Aptamer, GLYCEROL, HIV-1 REVERSE TRANSCRIPTASE P51 subunit, ... 著者 Ruiz, F.X, Miller, M.T, Tuske, S, Das, K, Arnold, E. 登録日 2017-10-30 公開日 2018-10-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Integrative Structural Biology Studies of HIV-1 Reverse Transcriptase Binding to a High-Affinity DNA Aptamer Curr Res Struct Biol, 2020
6C23	Cryo-EM structure of PRC2 bound to cofactors AEBP2 and JARID2 in the Compact Active State 分子名称: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, JARID2-substrate, ... 著者 Kasinath, V, Faini, M, Poepsel, S, Reif, D, Feng, A, Stjepanovic, G, Aebersold, R, Nogales, E. 登録日 2018-01-05 公開日 2018-01-24 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures of human PRC2 with its cofactors AEBP2 and JARID2. Science, 359, 2018
5DAL	Crystal Structure of human Glutathione Transferase Pi complexed with a metalloid in the presence of Glutathione 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Di-glutathione-PhenylArsine, GLUTATHIONE, ... 著者 Parker, L.J, Parker, M.W, Morton, C.J. 登録日 2015-08-20 公開日 2016-12-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Visualisation of Organoarsenic Human Glutathione Transferase P1-1 Complexes: Metabolism of Arsenic-based Therapeutics To Be Published
2P85	Structure of Human Lung Cytochrome P450 2A13 with indole bound in two alternate conformations 分子名称: Cytochrome P450 2A13, INDOLE, PROTOPORPHYRIN IX CONTAINING FE 著者 Scott, E.E, Stout, C.D. 登録日 2007-03-21 公開日 2007-04-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structure of the human lung cytochrome P450 2A13. J.Biol.Chem., 282, 2007

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