PDB: 36939 件ウェブページステータス検索Chemie searchBIRD

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4EP3	Crystal Structure of inactive single chain wild-type HIV-1 Protease in Complex with the substrate CA-p2 分子名称: BETA-MERCAPTOETHANOL, GLYCEROL, protease, ... 著者 Schiffer, C.A, Mittal, S. 登録日 2012-04-16 公開日 2012-06-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structural, kinetic, and thermodynamic studies of specificity designed HIV-1 protease. Protein Sci., 21, 2012
4EPX	Discovery of Small Molecules that Bind to K-Ras and Inhibit Sos-mediated Activation 分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Sun, Q, Burke, J.P, Phan, J, Burns, M.C, Olejniczak, E.T, Waterson, A.G, Lee, T, Rossanese, O.W, Fesik, S.W. 登録日 2012-04-17 公開日 2012-05-23 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Discovery of Small Molecules that Bind to K-Ras and Inhibit Sos-Mediated Activation. Angew.Chem.Int.Ed.Engl., 51, 2012
6ES3	Structure of CDX2-DNA(TCG) 分子名称: DNA (5'-D(P*GP*GP*AP*GP*GP*TP*CP*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3'), DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*CP*CP*TP*CP*C)-3'), Homeobox protein CDX-2 著者 Morgunova, E, Yin, Y, Jolma, A, Popov, A, Taipale, J. 登録日 2017-10-19 公開日 2018-03-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.57 Å) 主引用文献 Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima. Elife, 7, 2018
4ER1	THE ACTIVE SITE OF ASPARTIC PROTEINASES 分子名称: ENDOTHIAPEPSIN, N-[(1R,2R,4R)-1-(cyclohexylmethyl)-2-hydroxy-6-methyl-4-{[(2R)-2-methylbutyl]carbamoyl}heptyl]-3-(1H-imidazol-3-ium-4-yl)-N~2~-[3-naphthalen-1-yl-2-(naphthalen-1-ylmethyl)propanoyl]-L-alaninamide 著者 Quail, J.W, Cooper, J.B, Szelke, M, Blundell, T.L. 登録日 1990-10-14 公開日 1991-01-15 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The active site of aspartic proteinases FEBS Lett., 174, 1984
4ETE	Lysozyme, room-temperature, rotating anode, 0.0021 MGy 分子名称: CHLORIDE ION, Lysozyme C 著者 Boutet, S, Lomb, L, Williams, G, Barends, T, Aquila, A, Doak, R.B, Weierstall, U, DePonte, D, Steinbrener, J, Shoeman, R, Messerschmidt, M, Barty, A, White, T, Kassemeyer, S, Kirian, R, Seibert, M, Montanez, P, Kenney, C, Herbst, R, Hart, P, Pines, J, Haller, G, Gruner, S, Philllip, H, Tate, M, Hromalik, M, Koerner, L, van Bakel, N, Morse, J, Ghonsalves, W, Arnlund, D, Bogan, M, Calemann, C, Fromme, R, Hampton, C, Hunter, M, Johansson, L, Katona, G, Kupitz, C, Liang, M, Martin, A, Nass, K, Redecke, L, Stellato, F, Timneanu, N, Wang, D, Zatsepin, N, Schafer, D, Defever, K, Neutze, R, Fromme, P, Spence, J, Chapman, H, Schlichting, I. 登録日 2012-04-24 公開日 2012-06-13 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.905 Å) 主引用文献 High-resolution protein structure determination by serial femtosecond crystallography. Science, 337, 2012
3PCZ	Endothiapepsin in complex with benzamidine 分子名称: BENZAMIDINE, DIMETHYL SULFOXIDE, Endothiapepsin 著者 Koester, H, Heine, A, Klebe, G. 登録日 2010-10-22 公開日 2011-10-19 最終更新日 2021-08-04 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Experimental and computational active site mapping as a starting point to fragment-based lead discovery. Chemmedchem, 7, 2012
4EZP	Crystal structure of the substrate binding domain of E.coli DnaK in complex with A3-APO(residues 1 to 20) 分子名称: APO-monomer, Chaperone protein DnaK, SULFATE ION 著者 Zahn, M, Straeter, N. 登録日 2012-05-03 公開日 2013-04-17 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK. J.Mol.Biol., 425, 2013
4F01	Crystal structure of an artificial dimeric DnaK complex 分子名称: Chaperone protein DnaK 著者 Zahn, M, Straeter, N. 登録日 2012-05-03 公開日 2013-04-17 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK. J.Mol.Biol., 425, 2013
3PEP	REVISED 2.3 ANGSTROMS STRUCTURE OF PORCINE PEPSIN. EVIDENCE FOR A FLEXIBLE SUBDOMAIN 分子名称: ETHANOL, PEPSIN 著者 Abad-Zapatero, C, Erickson, J.W. 登録日 1989-10-24 公開日 1990-04-15 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Revised 2.3 A structure of porcine pepsin: evidence for a flexible subdomain Proteins, 8, 1990
4EYN	Human Insulin 分子名称: CHLORIDE ION, Insulin A chain, Insulin B chain, ... 著者 Favero-Retto, M.P, Palmieri, L.C, Lima, L.M.T.R. 登録日 2012-05-01 公開日 2013-05-01 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.532 Å) 主引用文献 Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm, 85, 2013
6EI8	Crystal structure of human tRNA-dihydrouridine (20) synthase dsRBD F359A mutant 分子名称: SULFATE ION, tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 著者 Bou-Nader, C, Pecqueur, L, Hamdane, D. 登録日 2017-09-18 公開日 2018-10-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Conformational Stability Adaptation of a Double-Stranded RNA-Binding Domain to Transfer RNA Ligand. Biochemistry, 58, 2019
3PBZ	Endothiapepsin in complex with a fragment 分子名称: 4-(diethylamino)benzohydrazide, DIMETHYL SULFOXIDE, Endothiapepsin, ... 著者 Koester, H, Heine, A, Klebe, G. 登録日 2010-10-21 公開日 2011-10-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes. J.Med.Chem., 54, 2011
6EGY	Crystal structure of cytochrome c in complex with mono-PEGylated sulfonatocalix[4]arene 分子名称: Cytochrome c iso-1, HEME C, SULFATE ION, ... 著者 Mummidivarapu, V.V.S, Rennie, M.L, Crowley, P.B. 登録日 2017-09-12 公開日 2018-10-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Noncovalent PEGylation via Sulfonatocalix[4]arene-A Crystallographic Proof. Bioconjug.Chem., 29, 2018
4F0O	Human Insulin 分子名称: CHLORIDE ION, Insulin A chain, Insulin B chain, ... 著者 Favero-Retto, M.P, Palmieri, L.C, Lima, L.M.T.R. 登録日 2012-05-04 公開日 2013-05-08 最終更新日 2013-12-18 実験手法 X-RAY DIFFRACTION (1.672 Å) 主引用文献 Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm, 85, 2013
4EZT	Crystal structure of the substrate binding domain of E.coli DnaK in complex with heliocin (residues 14 to 21) 分子名称: Chaperone protein DnaK, Heliocin 著者 Zahn, M, Straeter, N. 登録日 2012-05-03 公開日 2013-04-17 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK. J.Mol.Biol., 425, 2013
4F02	Crystal structure of the PABP-binding site of eIF4G in complex with RRM1-2 of PABP and poly(A) 分子名称: Eukaryotic translation initiation factor 4 gamma 1, Polyadenylate-binding protein 1, RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') 著者 Safaee, N, Kozlov, G, Gehring, K.B. 登録日 2012-05-03 公開日 2012-08-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Interdomain Allostery Promotes Assembly of the Poly(A) mRNA Complex with PABP and eIF4G. Mol.Cell, 48, 2012
4F0N	Human Insulin 分子名称: CHLORIDE ION, Insulin A chain, Insulin B chain, ... 著者 Favero-Retto, M.P, Palmieri, L.C, Lima, L.M.T.R. 登録日 2012-05-04 公開日 2013-05-08 最終更新日 2013-12-18 実験手法 X-RAY DIFFRACTION (1.679 Å) 主引用文献 Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm, 85, 2013
3PEC	Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis 分子名称: 9-{hydroxy[(5S,6R)-6-hydroxy-6-{[(1S)-3-{[(3S)-1-hydroxy-2-oxoazepan-3-yl]amino}-1-methyl-3-oxopropyl]oxy}-5-({[(4S)-2-(2-hydroxyphenyl)-4,5-dihydro-1,3-oxazol-4-yl]carbonyl}amino)hexyl]amino}-9-oxononanoic acid, FE (III) ION, GLYCEROL, ... 著者 Clifton, M.C. 登録日 2010-10-25 公開日 2011-10-05 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis To be Published
4F4T	Human Insulin 分子名称: CHLORIDE ION, Insulin A chain, Insulin B chain, ... 著者 Favero-Retto, M.P, Palmieri, L.C, Lima, L.M.T.R. 登録日 2012-05-11 公開日 2013-05-15 最終更新日 2013-12-18 実験手法 X-RAY DIFFRACTION (1.637 Å) 主引用文献 Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm, 85, 2013
3PBF	Surfactant Protein-A neck and carbohydrate recognition domain (NCRD) complexed with glycerol 分子名称: CALCIUM ION, GLYCEROL, Pulmonary surfactant-associated protein A 著者 Shang, F, Rynkiewicz, M.J, McCormack, F.X, Wu, H, Cafarella, T.M, Head, J, Seaton, B.A. 登録日 2010-10-20 公開日 2010-11-03 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystallographic complexes of surfactant protein A and carbohydrates reveal ligand-induced conformational change. J.Biol.Chem., 286, 2011
4EYP	Human Insulin 分子名称: CHLORIDE ION, Insulin A chain, Insulin B chain, ... 著者 Favero-Retto, M.P, Palmieri, L.C, Lima, L.M.T.R. 登録日 2012-05-01 公開日 2013-05-01 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.591 Å) 主引用文献 Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm, 85, 2013
3PCW	Endothiapepsin in complex with a fragment 分子名称: 4-(trifluoromethyl)benzenecarboximidamide, DIMETHYL SULFOXIDE, Endothiapepsin, ... 著者 Koester, H, Heine, A, Klebe, G. 登録日 2010-10-22 公開日 2011-10-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes. J.Med.Chem., 54, 2011
4F16	Crystal Structure of the alpha spectrin SH3 domain at pH 5 分子名称: Spectrin alpha chain, brain 著者 Camara-Artigas, A, Gavira, J.A. 登録日 2012-05-06 公開日 2013-05-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Crystal Structure of the alpha spectrin SH3 domain at pH 5 To be Published
3PED	Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis 分子名称: (9Z)-11-{hydroxy[(5S)-6-{[(1S)-3-{[(3S)-1-hydroxy-2-oxoazepan-3-yl]amino}-1-methyl-3-oxopropyl]oxy}-5-({[(4S)-2-(2-hydroxyphenyl)-4,5-dihydro-1,3-oxazol-4-yl]carbonyl}amino)-6-oxohexyl]amino}-11-oxoundec-9-enoic acid, FE (III) ION, Neutrophil gelatinase-associated lipocalin, ... 著者 Clifton, M.C. 登録日 2010-10-25 公開日 2011-10-05 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis To be Published
3PIS	Crystal Structure of Carcinoscorpius rotundicauda Serine Protease Inhibitor Domain 1 分子名称: Kazal-type serine protease inhibitor SPI-1 著者 Giri, P.K, Tang, X.H, Sivaraman, J. 登録日 2010-11-08 公開日 2010-12-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Modifying the Substrate Specificity of Carcinoscorpius rotundicauda Serine Protease Inhibitor Domain 1 to Target Thrombin To be Published

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