PDB: 1466 件ウェブページステータス検索Chemie searchBIRD

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2FCQ	X-ray Crystal Structure of a Chemically Synthesized Ubiquitin with a Cubic Space Group 分子名称: CADMIUM ION, Ubiquitin 著者 Bang, D, Gribenko, A.V, Tereshko, V, Kossiakoff, A.A, Kent, S.B, Makhatadze, G.I. 登録日 2005-12-12 公開日 2006-01-31 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Dissecting the energetics of protein alpha-helix C-cap termination through chemical protein synthesis. Nat.Chem.Biol., 2, 2006
6KOW	Retracted state of S65/T66 double-phosphorylated ubiquitin 分子名称: Polyubiquitin-B 著者 Dong, X, Tang, C. 登録日 2019-08-13 公開日 2019-08-28 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Ubiquitin is double-phosphorylated by PINK1 for enhanced pH-sensitivity of conformational switch. Protein Cell, 10, 2019
5AF5	Structure of Lys33-linked triUb S.G. P 212121 分子名称: POLYUBIQUITIN-C 著者 Michel, M.A, Elliott, P.R, Swatek, K.N, Simicek, M, Pruneda, J.N, Wagstaff, J.L, Freund, S.M.V, Komander, D. 登録日 2015-01-19 公開日 2015-03-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Assembly and Specific Recognition of K29- and K33-Linked Polyubiquitin. Mol.Cell, 58, 2015
2GBJ	Crystal Structure of the 9-10 8 Glycine Insertion Mutant of Ubiquitin. 分子名称: Ubiquitin 著者 Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D. 登録日 2006-03-10 公開日 2006-05-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. J.Mol.Biol., 359, 2006
2GBN	Crystal Structure of the 35-36 8 Glycine Insertion Mutant of Ubiquitin 分子名称: Ubiquitin 著者 Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D. 登録日 2006-03-10 公開日 2006-05-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. J.Mol.Biol., 359, 2006
6MDH	X-ray crystal structure of ISG15 from Myotis davidii 分子名称: Ubiquitin-like protein ISG15 著者 Goodwin, O.Y, Langley, C.A, Dzimianski, J.V, Daczkowski, C.M, Pegan, S.D. 登録日 2018-09-04 公開日 2018-12-12 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Structure of interferon-stimulated gene product 15 (ISG15) from the bat species Myotis davidii and the impact of interdomain ISG15 interactions on viral protein engagement. Acta Crystallogr D Struct Biol, 75, 2019
2GBR	Crystal Structure of the 35-36 MoaD Insertion Mutant of Ubiquitin 分子名称: CADMIUM ION, Ubiquitin 著者 Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D. 登録日 2006-03-10 公開日 2006-05-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. J.Mol.Biol., 359, 2006
2GBM	Crystal Structure of the 35-36 8 Glycine Insertion Mutant of Ubiquitin 分子名称: ARSENIC, Ubiquitin 著者 Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D. 登録日 2006-03-10 公開日 2006-05-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. J.Mol.Biol., 359, 2006
2GBK	Crystal Structure of the 9-10 MoaD Insertion Mutant of Ubiquitin 分子名称: Ubiquitin 著者 Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D. 登録日 2006-03-10 公開日 2006-05-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. J.Mol.Biol., 359, 2006
5AF4	Structure of Lys33-linked diUb 分子名称: GLYCEROL, SULFATE ION, UBIQUITIN 著者 Michel, M.A, Elliott, P.R, Swatek, K.N, Simicek, M, Pruneda, J.N, Wagstaff, J.L, Freund, S.M.V, Komander, D. 登録日 2015-01-19 公開日 2015-03-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Assembly and Specific Recognition of K29- and K33-Linked Polyubiquitin. Mol.Cell, 58, 2015
6JL3	Crystal Structure of the UBL domain of Plasmodium Falciparum Dsk2 分子名称: Ubiquitin domain-containing protein DSK2,putative 著者 Gupta, I, Khan, S. 登録日 2019-03-03 公開日 2020-02-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.303 Å) 主引用文献 The recognition of proteasomal receptors by Plasmodium falciparum DSK2. Mol.Biochem.Parasitol., 236, 2020
2FAZ	Ubiquitin-Like Domain of Human Nuclear Zinc Finger Protein NP95 分子名称: Ubiquitin-like containing PHD and RING finger domains protein 1 著者 Walker, J.R, Wybenga-Groot, L, Doherty, R.S, Finerty Jr, P.J, Newman, E, Mackenzie, F.M, Weigelt, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC) 登録日 2005-12-08 公開日 2005-12-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Ubiquitin-Like Domain of Human Nuclear Zinc Finger Protein NP95 To be Published
2HJ8	Solution NMR structure of the C-terminal domain of the interferon alpha-inducible ISG15 protein from Homo sapiens. Northeast Structural Genomics target HR2873B 分子名称: Interferon-induced 17 kDa protein 著者 Aramini, J.M, Ho, C.K, Yin, C, Cunningham, K, Janjua, H, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2006-06-30 公開日 2006-08-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution NMR structure of the C-terminal domain of the interferon alpha-inducible ISG15 protein from Homo sapiens. Northeast Structural Genomics target HR2873B. To be Published
2DEN	Solution Structure of the Ubiquitin-Associated Domain of Human BMSC-UbP and its Complex with Ubiquitin 分子名称: Immunoglobulin G-binding protein G,Ubiquitin-like protein 7, Polyubiquitin-B 著者 Hu, H.Y, Lin, D.H, Chang, Y.G. 登録日 2006-02-14 公開日 2006-06-13 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of the ubiquitin-associated domain of human BMSC-UbP and its complex with ubiquitin Protein Sci., 15, 2006
2DAF	Solution Structure of the Novel Identified Ubiquitin-like Domain in the Human Hypothetical Protein FLJ35834 分子名称: FLJ35834 protein 著者 Zhao, C, Kigawa, T, Saito, K, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-12-14 公開日 2006-06-14 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the Novel Identified Ubiquitin-like Domain in the Human Hypothetical Protein FLJ35834 To be Published
3NS8	Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Ubiquitin 著者 Zhang, D, LaRonde-LeBlanc, N, Fushman, D. 登録日 2010-07-01 公開日 2011-07-20 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.707 Å) 主引用文献 Structural and biochemical studies of the open state of Lys48-linked diubiquitin. Biochim.Biophys.Acta, 1823, 2012
3OJ3	Crystal structure of the A20 ZnF4 and ubiquitin complex 分子名称: Tumor necrosis factor alpha-induced protein 3, Ubiquitin, ZINC ION 著者 Bosanac, I, Hymowitz, S.G. 登録日 2010-08-20 公開日 2010-12-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-KB Signaling Mol.Cell, 40, 2010
4K7U	Crystal structure of Zn2.3-hUb (human ubiquitin) adduct from a solution 70 mM zinc acetate/1.3 mM hUb 分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Fermani, S, Falini, G, Calvaresi, M, Bottoni, A, Arnesano, F, Natile, G. 登録日 2013-04-17 公開日 2013-05-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Conformational selection of ubiquitin quaternary structures driven by zinc ions. Chemistry, 19, 2013
4K7S	Crystal structure of Zn2-hUb (human ubiquitin) adduct from a solution 35 mM zinc acetate/1.3 mM hUb 分子名称: 1,2-ETHANEDIOL, ACETATE ION, ZINC ION, ... 著者 Fermani, S, Falini, G, Calvaresi, M, Bottoni, A, Arnesano, F, Natile, G. 登録日 2013-04-17 公開日 2013-05-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Conformational selection of ubiquitin quaternary structures driven by zinc ions. Chemistry, 19, 2013
4I6N	Crystal structure of Trichinella spiralis UCH37 catalytic domain bound to Ubiquitin vinyl methyl ester 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, METHYL 4-AMINOBUTANOATE, SODIUM ION, ... 著者 Morrow, M.E, Ronau, J.A, White, R.R, Artavanis-Tsakonas, K, Das, C. 登録日 2012-11-29 公開日 2013-05-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.701 Å) 主引用文献 Stabilization of an Unusual Salt Bridge in Ubiquitin by the Extra C-Terminal Domain of the Proteasome-Associated Deubiquitinase UCH37 as a Mechanism of Its Exo Specificity. Biochemistry, 52, 2013
3QHT	Crystal Structure of the Monobody ySMB-1 bound to yeast SUMO 分子名称: GLYCEROL, Monobody ySMB-1, Ubiquitin-like protein SMT3 著者 Koide, S, Gilbreth, R.N. 登録日 2011-01-26 公開日 2011-05-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Isoform-specific monobody inhibitors of small ubiquitin-related modifiers engineered using structure-guided library design. Proc.Natl.Acad.Sci.USA, 108, 2011
6FJ7	Caldiarchaeum Subterraneum Ubiquitin 分子名称: SULFATE ION, Ubiquitin-like protein 著者 Wojtynek, M, Martin, J, Hartmann, M.D. 登録日 2018-01-21 公開日 2018-07-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Rpn11-mediated ubiquitin processing in an ancestral archaeal ubiquitination system. Nat Commun, 9, 2018
6E2B	Ubiquitin in complex with Pt(2-phenilpyridine)(PPh3) 分子名称: GLYCEROL, SULFATE ION, Ubiquitin, ... 著者 Zhemkov, V.A, Kim, M. 登録日 2018-07-11 公開日 2018-11-14 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Reactions of Cyclometalated Platinum(II) [Pt(N∧C)(PR3)Cl] Complexes with Imidazole and Imidazole-Containing Biomolecules: Fine-Tuning of Reactivity and Photophysical Properties via Ligand Design. Inorg Chem, 58, 2019
3ONS	Crystal structure of Human Ubiquitin in a new crystal form 分子名称: Ubiquitin 著者 Amodeo, G.A, Huang, K.Y, Mcdermott, A.E, Tong, L. 登録日 2010-08-30 公開日 2011-02-23 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The structure of human ubiquitin in 2-methyl-2,4-pentanediol: a new conformational switch. Protein Sci., 20, 2011
4K7W	Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 100 mM zinc acetate/1.3 mM hUb 分子名称: 1,2-ETHANEDIOL, ACETATE ION, ZINC ION, ... 著者 Fermani, S, Falini, G, Calvaresi, M, Bottoni, A, Arnesano, F, Natile, G. 登録日 2013-04-17 公開日 2013-05-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Conformational selection of ubiquitin quaternary structures driven by zinc ions. Chemistry, 19, 2013

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