PDB: 376 件ウェブページステータス検索Chemie searchBIRD

---

7CAL	Cryo-EM Structure of the Hyperpolarization-Activated Inwardly Rectifying Potassium Channel KAT1 from Arabidopsis 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Potassium channel KAT1 著者 Li, S.Y, Yang, F, Sun, D.M, Zhang, Y, Zhang, M.G, Zhou, P, Liu, S.L, Zhang, Y.N, Zhang, L.H, Tian, C.L. 登録日 2020-06-09 公開日 2020-07-29 最終更新日 2020-11-18 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structure of the hyperpolarization-activated inwardly rectifying potassium channel KAT1 from Arabidopsis. Cell Res., 30, 2020
7N17	Structure of TAX-4_R421W apo open state 分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cyclic nucleotide-gated cation channel 著者 Zheng, X, Li, H, Hu, Z, Su, D, Yang, J. 登録日 2021-05-27 公開日 2022-03-16 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural and functional characterization of an achromatopsia-associated mutation in a phototransduction channel. Commun Biol, 5, 2022
7N15	Structure of TAX-4_R421W w/cGMP open state 分子名称: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CYCLIC GUANOSINE MONOPHOSPHATE, ... 著者 Zheng, X, Li, H, Hu, Z, Su, D, Yang, J. 登録日 2021-05-27 公開日 2022-03-16 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural and functional characterization of an achromatopsia-associated mutation in a phototransduction channel. Commun Biol, 5, 2022
7N16	Structure of TAX-4_R421W apo closed state 分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cyclic nucleotide-gated cation channel, SODIUM ION 著者 Zheng, X, Li, H, Hu, Z, Su, D, Yang, J. 登録日 2021-05-27 公開日 2022-03-16 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural and functional characterization of an achromatopsia-associated mutation in a phototransduction channel. Commun Biol, 5, 2022
6VY0	SthK P300A cyclic nucleotide-gated potassium channel in a putative active state, in complex with cAMP 分子名称: SthK 著者 Schmidpeter, P.A.M, Rheinberger, J, Nimigean, C.M. 登録日 2020-02-25 公開日 2020-11-11 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (6.68 Å) 主引用文献 Prolyl isomerization controls activation kinetics of a cyclic nucleotide-gated ion channel. Nat Commun, 11, 2020
6WEJ	Structure of cGMP-unbound WT TAX-4 reconstituted in lipid nanodiscs 分子名称: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cyclic nucleotide-gated cation channel, ... 著者 Zheng, X, Fu, Z, Su, D, Zhang, Y, Li, M, Pan, Y, Li, H, Li, S, Grassucci, R.A, Ren, Z, Hu, Z, Li, X, Zhou, M, Li, G, Frank, J, Yang, J. 登録日 2020-04-02 公開日 2020-06-03 最終更新日 2020-07-22 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Mechanism of ligand activation of a eukaryotic cyclic nucleotide-gated channel. Nat.Struct.Mol.Biol., 27, 2020
6WEK	Structure of cGMP-bound WT TAX-4 reconstituted in lipid nanodiscs 分子名称: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CYCLIC GUANOSINE MONOPHOSPHATE, ... 著者 Zheng, X, Fu, Z, Su, D, Zhang, Y, Li, M, Pan, Y, Li, H, Li, S, Grassucci, R.A, Ren, Z, Hu, Z, Li, X, Zhou, M, Li, G, Frank, J, Yang, J. 登録日 2020-04-02 公開日 2020-06-03 最終更新日 2020-07-22 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Mechanism of ligand activation of a eukaryotic cyclic nucleotide-gated channel. Nat.Struct.Mol.Biol., 27, 2020
6WJG	PKA RIIbeta holoenzyme with DnaJB1-PKAc fusion in fibrolamellar hepatoceullar carcinoma 分子名称: DnaJ homolog subfamily B member 1, cAMP-dependent protein kinase catalytic subunit alpha fusion, cAMP-dependent protein kinase type II-beta regulatory subunit 著者 Lu, T.-W, Aoto, P.C, Weng, J.-H, Nielsen, C, Cash, J.N, Hall, J, Zhang, P, Simon, S.M, Cianfrocco, M.A, Taylor, S.S. 登録日 2020-04-13 公開日 2020-12-02 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (6.2 Å) 主引用文献 Structural analyses of the PKA RII beta holoenzyme containing the oncogenic DnaJB1-PKAc fusion protein reveal protomer asymmetry and fusion-induced allosteric perturbations in fibrolamellar hepatocellular carcinoma. Plos Biol., 18, 2020
7O4H	The structure of the native CNGA1/CNGB1 CNG channel from retinal rods 分子名称: Cyclic nucleotide-gated cation channel beta-1, cGMP-gated cation channel alpha-1 著者 Barret, D.C.A, Marino, J. 登録日 2021-04-06 公開日 2022-01-12 最終更新日 2022-02-02 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 The structure of the native CNGA1/CNGB1 CNG channel from bovine retinal rods. Nat.Struct.Mol.Biol., 29, 2022
6WEL	Structure of cGMP-unbound F403V/V407A mutant TAX-4 reconstituted in lipid nanodiscs 分子名称: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cyclic nucleotide-gated cation channel, ... 著者 Zheng, X, Fu, Z, Su, D, Zhang, Y, Li, M, Pan, Y, Li, H, Li, S, Grassucci, R.A, Ren, Z, Hu, Z, Li, X, Zhou, M, Li, G, Frank, J, Yang, J. 登録日 2020-04-02 公開日 2020-06-03 最終更新日 2020-07-22 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Mechanism of ligand activation of a eukaryotic cyclic nucleotide-gated channel. Nat.Struct.Mol.Biol., 27, 2020
6WJF	PKA RIIbeta holoenzyme with DnaJB1-PKAc fusion in fibrolamellar hepatoceullar carcinoma 分子名称: DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha fusion, cAMP-dependent protein kinase type II-beta regulatory subunit 著者 Lu, T.-W, Aoto, P.C, Weng, J.-H, Nielsen, C, Cash, J.N, Hall, J, Zhang, P, Simon, S.M, Cianfrocco, M.A, Taylor, S.S. 登録日 2020-04-13 公開日 2020-12-02 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Structural analyses of the PKA RII beta holoenzyme containing the oncogenic DnaJB1-PKAc fusion protein reveal protomer asymmetry and fusion-induced allosteric perturbations in fibrolamellar hepatocellular carcinoma. Plos Biol., 18, 2020
7FEW	Pseudomonas aeruginosa Virulence Factor Regulator with cAMP ligand and auranofin gold analogues 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, SULFATE ION, cAMP-activated global transcriptional regulator Vfr 著者 Chew, B.L.A, Luo, D. 登録日 2021-07-22 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural basis for the inhibitory mechanism of auranofin and gold(I) analogues against Pseudomonas aeruginosa global virulence factor regulator Vfr. Comput Struct Biotechnol J, 21, 2023
7FF9	Pseudomonas aeruginosa Virulence Factor Regulator with cAMP ligand and Cl(triethylphosphine)gold(I) 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CHLORIDE ION, GOLD ION, ... 著者 Chew, B.L.A, Luo, D. 登録日 2021-07-23 公開日 2022-07-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Inhibitory mechanism of gold analogues against Pseudomonas global virulence factor regulator Vfr To Be Published
7FF0	Pseudomonas aeruginosa Virulence Factor Regulator with cAMP ligand and auranofin 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, GOLD ION, SULFATE ION, ... 著者 Chew, B.L.A, Luo, D. 登録日 2021-07-22 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for the inhibitory mechanism of auranofin and gold(I) analogues against Pseudomonas aeruginosa global virulence factor regulator Vfr. Comput Struct Biotechnol J, 21, 2023
7FF8	Pseudomonas aeruginosa Virulence Factor Regulator with cAMP ligand and Cl(triethylphosphine)gold(I) 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CHLORIDE ION, GOLD ION, ... 著者 Chew, B.L.A, Luo, D. 登録日 2021-07-22 公開日 2022-07-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Inhibitory mechanism of gold analogues against Pseudomonas global virulence factor regulator Vfr To Be Published
7ETS	Crystal structure of crp protein from Gardnerella Vaginalis 分子名称: Crp/Fnr family transcriptional regulator, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Dong, H.J, Wang, S, Zhang, J.M, Gu, L. 登録日 2021-05-13 公開日 2022-04-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Crystal structure of crp protein from Gardnerella Vaginalis To Be Published
5CIZ	E. coli RNA polymerase alpha subunit CTD in complex with CAP and DNA: A(5)-tract binding site for alpha CTD 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA (5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*AP*GP*GP*CP*AP*AP*AP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*TP*TP*TP*GP*CP*CP*TP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3'), ... 著者 Napoli, A.A, Lawson, C.L. 登録日 2015-07-13 公開日 2016-06-29 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (5.0098 Å) 主引用文献 The RNA Polymerase alpha Subunit Recognizes the DNA Shape of the Upstream Promoter Element Biochemistry, 2020
5CVR	Crystal structure of FNR of A. fischeri in a partially degraded form 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, FE2/S2 (INORGANIC) CLUSTER, FNR type regulator 著者 Volbeda, A, Fontecilla-Camps, J.C. 登録日 2015-07-27 公開日 2015-12-16 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The crystal structure of the global anaerobic transcriptional regulator FNR explains its extremely fine-tuned monomer-dimer equilibrium. Sci Adv, 1, 2015
1ZRE	4 crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-[6G;17C]ICAP38 DNA 分子名称: 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*GP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*CP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ... 著者 Berman, H.M, Napoli, A.A. 登録日 2005-05-19 公開日 2006-03-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: recognition of pyrimidine-purine and purine-purine steps. J.Mol.Biol., 357, 2006
1ZRC	4 Crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-ICAP38 DNA 分子名称: 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ... 著者 Berman, H.M, Napoli, A.A. 登録日 2005-05-19 公開日 2006-03-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: recognition of pyrimidine-purine and purine-purine steps. J.Mol.Biol., 357, 2006
1ZYB	Crystal structure of transcription regulator from Bacteroides thetaiotaomicron VPI-5482 at 2.15 A resolution 分子名称: GLYCEROL, transcription regulator, CRP family 著者 Joint Center for Structural Genomics (JCSG) 登録日 2005-06-09 公開日 2005-07-19 最終更新日 2023-01-25 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure of transcription regulator from Bacteroides thetaiotaomicron VPI-5482 at 2.15 A resolution To be published
1ZRF	4 crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-[6C;17G]ICAP38 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3', ... 著者 Berman, H.M, Napoli, A.A. 登録日 2005-05-19 公開日 2006-03-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: recognition of pyrimidine-purine and purine-purine steps. J.Mol.Biol., 357, 2006
1ZRD	4 crystal structures of CAP-DNA with all base-pair substitutions at position 6, CAP-[6A;17T]ICAP38 DNA 分子名称: 5'-D(*AP*TP*TP*TP*CP*GP*AP*AP*AP*AP*AP*TP*GP*AP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*TP*CP*AP*TP*TP*TP*TP*TP*CP*GP*AP*AP*AP*T)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ... 著者 Berman, H.M, Napoli, A.A. 登録日 2005-05-19 公開日 2006-03-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: recognition of pyrimidine-purine and purine-purine steps. J.Mol.Biol., 357, 2006
3TNQ	Structure and Allostery of the PKA RIIb Tetrameric Holoenzyme 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein kinase, ... 著者 Zhang, P, Smith-Nguyen, E.V, Keshwani, M.M, Deal, M.S, Kornev, A.P, Taylor, S.S. 登録日 2011-09-01 公開日 2012-02-01 最終更新日 2012-09-26 実験手法 X-RAY DIFFRACTION (3.097 Å) 主引用文献 Structure and allostery of the PKA RIIbeta tetrameric holoenzyme Science, 335, 2012
3TNP	Structure and Allostery of the PKA RIIb Tetrameric Holoenzyme 分子名称: cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-beta regulatory subunit 著者 Zhang, P, Smith-Nguyen, E.V, Keshwani, M.M, Deal, M.S, Kornev, A.P, Taylor, S.S. 登録日 2011-09-01 公開日 2012-02-01 最終更新日 2013-02-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure and allostery of the PKA RIIbeta tetrameric holoenzyme Science, 335, 2012

<12345678910111213141516>