PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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7Y4O	Rat Semaphorin 6D extracellular region 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Semaphorin 6D 著者 Tanaka, T, Neyazaki, M, Nogi, T. 登録日 2022-06-15 公開日 2022-10-19 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Hybrid in vitro/in silico analysis of low-affinity protein-protein interactions that regulate signal transduction by Sema6D. Protein Sci., 31, 2022
7Y4Q	Semaphorin 6D in complex with Plexin A1 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1, ... 著者 Tanaka, T, Neyazaki, M, Nogi, T. 登録日 2022-06-16 公開日 2022-10-19 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (4.7 Å) 主引用文献 Hybrid in vitro/in silico analysis of low-affinity protein-protein interactions that regulate signal transduction by Sema6D. Protein Sci., 31, 2022
2KC1	NMR structure of the F0 domain (residues 0-85) of the talin ferm domain 分子名称: MKIAA1027 protein 著者 Goult, B.T, Elliott, P.R, Roberts, G.C.K, Critchley, D.R, Barsukov, I.L. 登録日 2008-12-13 公開日 2010-01-19 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structure of a double ubiquitin-like domain in the talin head: a role in integrin activation. Embo J., 29, 2010
1I5E	CRYSTAL STRUCTURE OF BACILLUS CALDOLYTICUS URACIL PHOSPHORIBOSYLTRANSFERASE WITH BOUND UMP 分子名称: URACIL PHOSPHORIBOSYLTRANSFERASE, URIDINE-5'-MONOPHOSPHATE 著者 Kadziola, A, Neuhard, J, Larsen, S. 登録日 2001-02-27 公開日 2002-06-05 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of product-bound Bacillus caldolyticus uracil phosphoribosyltransferase confirms ordered sequential substrate binding. Acta Crystallogr.,Sect.D, 58, 2002
5J03	Crystal Structure of a chimeric Kv7.2 - Kv7.3 proximal C-terminal Domain in Complex with Calmodulin 分子名称: ACETATE ION, CALCIUM ION, Calmodulin, ... 著者 Strulovich, R, Hirsch, J.A. 登録日 2016-03-26 公開日 2016-09-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Insights into the M-Channel Proximal C-Terminus/Calmodulin Complex. Biochemistry, 55, 2016
1ID1	CRYSTAL STRUCTURE OF THE RCK DOMAIN FROM E.COLI POTASSIUM CHANNEL 分子名称: PUTATIVE POTASSIUM CHANNEL PROTEIN 著者 Jiang, Y, Pico, A, Cadene, M, Chait, B.T, MacKinnon, R. 登録日 2001-04-02 公開日 2001-04-11 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of the RCK domain from the E. coli K+ channel and demonstration of its presence in the human BK channel. Neuron, 29, 2001
5IWA	Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with the GE81112 peptide antibiotic 分子名称: (2S,3S)-2-{[(2S)-3-(2-amino-1H-imidazol-5-yl)-2-{[(2S,4S)-5-(carbamoyloxy)-4-hydroxy-2-({[(2S,3S)-3-hydroxypiperidin-2-yl]carbonyl}amino)pentanoyl]amino}propanoyl]amino}-3-(2-chloro-1H-imidazol-5-yl)-3-hydroxypropanoic acid, 16S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Schedlbauer, A, Kaminishi, T, Ochoa-Lizarralde, B, Chieko, N, Masahito, K, Takemoto, C, Yokoyama, S, Connell, S.R, Fucini, P. 登録日 2016-03-22 公開日 2016-04-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Inhibition of translation initiation complex formation by GE81112 unravels a 16S rRNA structural switch involved in P-site decoding. Proc.Natl.Acad.Sci.USA, 113, 2016
2KT5	RRM domain of mRNA export adaptor REF2-I bound to HSV-1 ICP27 peptide 分子名称: ICP27, RNA and export factor-binding protein 2 著者 Tunnicliffe, N.B, Golovanov, A.P, Wilson, S.A, Hautbergue, G.M. 登録日 2010-01-18 公開日 2011-01-12 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural Basis for the Recognition of Cellular mRNA Export Factor REF by Herpes Viral Proteins HSV-1 ICP27 and HVS ORF57. Plos Pathog., 7, 2011
6NX1	STRUCTURE OF HUMAN PREGNANE X RECEPTOR LIGAND BINDING DOMAIN BOUND TETHERED WITH SRC CO-ACTIVATOR PEPTIDE AND COMPOUND-3 AKA 1,1,1,3,3,3-HEXAFLUORO-2-{4-[1-(4- LUOROBENZENESULFONYL)CYCLOPENTYL]PHENYL}PROPAN-2-OL 分子名称: 1,1,1,3,3,3-hexafluoro-2-(4-{1-[(4-fluorophenyl)sulfonyl]cyclopentyl}phenyl)propan-2-ol, Nuclear receptor subfamily 1 group I member 2,Nuclear receptor coactivator 1 fusion 著者 Khan, J.A. 登録日 2019-02-07 公開日 2020-02-12 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Structure-based Discovery of Phenyl (3-Phenylpyrrolidin-3-yl)sulfones as Selective, Orally Active ROR gamma t Inverse Agonists. Acs Med.Chem.Lett., 10, 2019
6BHO	Green Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome 分子名称: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN 著者 Lim, S, Yu, Q, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B. 登録日 2017-10-31 公開日 2018-04-18 最終更新日 2019-12-04 実験手法 SOLUTION NMR 主引用文献 Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6VTJ	Structure of a thiolation-reductase di-domain from an archaeal non-ribosomal peptide synthetase 分子名称: 4'-PHOSPHOPANTETHEINE, Non-ribosomal peptide synthetase 著者 Deshpande, S, Lott, J.S, Lee, T.V. 登録日 2020-02-12 公開日 2020-02-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural characterization of a PCP-R didomain from an archaeal nonribosomal peptide synthetase reveals novel interdomain interactions. J.Biol.Chem., 296, 2021
6OF2	Precursor ribosomal RNA processing complex, State 2. 分子名称: CLP1_P domain-containing protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Pillon, M.C, Hsu, A.L, Krahn, J.M, Williams, J.G, Goslen, K.H, Sobhany, M, Borgnia, M.J, Stanley, R.E. 登録日 2019-03-28 公開日 2019-09-11 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryo-EM reveals active site coordination within a multienzyme pre-rRNA processing complex. Nat.Struct.Mol.Biol., 26, 2019
6VVE	Legionella pneumophila Lpg2603 kinase bound to IP6, Mn2+, and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Dot/Icm T4SS effector, INOSITOL HEXAKISPHOSPHATE, ... 著者 Tomchick, D.R, Tagliabracci, V.S, Park, B.C. 登録日 2020-02-17 公開日 2020-04-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 ALegionellaeffector kinase is activated by host inositol hexakisphosphate. J.Biol.Chem., 295, 2020
6VVW	W0 fused 4-OT wild type symmetric trimer 分子名称: Tautomerase 著者 Medellin, B.P, Whitman, C.P, Zhang, Y.J. 登録日 2020-02-18 公開日 2020-04-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural Basis for the Asymmetry of a 4-Oxalocrotonate Tautomerase Trimer. Biochemistry, 59, 2020
6CV9	Cytoplasmic domain of mTRPC6 分子名称: Short transient receptor potential channel 6 著者 Azumaya, C.M, Sierra-Valdez, F.J, Cordero-Morales, J.F, Nakagawa, T. 登録日 2018-03-27 公開日 2018-05-23 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Cryo-EM structure of the cytoplasmic domain of murine transient receptor potential cation channel subfamily C member 6 (TRPC6). J. Biol. Chem., 293, 2018
5MGC	STRUCTURE OF E298Q-BETA-GALACTOSIDASE FROM ASPERGILLUS NIGER IN COMPLEX WITH 4-Galactosyl-lactose 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Probable beta-galactosidase A, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Rico-Diaz, A, Ramirez-Escudero, M, Vizoso Vazquez, A, Cerdan, M.E, Becerra, M, Sanz-Aparicio, J. 登録日 2016-11-21 公開日 2017-04-19 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural features of Aspergillus niger beta-galactosidase define its activity against glycoside linkages. FEBS J., 284, 2017
6OF3	Precursor ribosomal RNA processing complex, State 1. 分子名称: CLP1_P domain-containing protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Pillon, M.C, Hsu, A.L, Krahn, J.M, Williams, J.G, Goslen, K.H, Sobhany, M, Borgnia, M.J, Stanley, R.E. 登録日 2019-03-28 公開日 2019-09-11 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Cryo-EM reveals active site coordination within a multienzyme pre-rRNA processing complex. Nat.Struct.Mol.Biol., 26, 2019
6O98	Crystal structure of RAR-related orphan receptor C in complex with a phenyl (3-phenylpyrrolidin-3-yl)sulfone inhibitor 分子名称: 1-(4-{(3R)-3-[(4-fluorophenyl)sulfonyl]-3-[4-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)phenyl]pyrrolidine-1-carbonyl}piperazin-1-yl)ethan-1-one, Nuclear receptor ROR-gamma 著者 Sack, J.S. 登録日 2019-03-13 公開日 2019-03-20 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structure-based Discovery of Phenyl (3-Phenylpyrrolidin-3-yl)sulfones as Selective, Orally Active ROR gamma t Inverse Agonists. ACS Med Chem Lett, 10, 2019
6D07	Crystal structure of the complex between human chromobox homolog 1 (CBX1) and H3K9me3 peptide 分子名称: Chromobox protein homolog 1, GLYCEROL, Histone H3.1 著者 Arora, S, Horne, W.S, Islam, K. 登録日 2018-04-10 公開日 2019-04-10 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Engineering Methyllysine Writers and Readers for Allele-Specific Regulation of Protein-Protein Interactions. J.Am.Chem.Soc., 141, 2019
1LDN	STRUCTURE OF A TERNARY COMPLEX OF AN ALLOSTERIC LACTATE DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS AT 2.5 ANGSTROMS RESOLUTION 分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, L-LACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Wigley, D.B, Gamblin, S.J, Turkenburg, J.P, Dodson, E.J, Piontek, K, Muirhead, H, Holbrook, J.J. 登録日 1991-11-19 公開日 1994-01-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of a ternary complex of an allosteric lactate dehydrogenase from Bacillus stearothermophilus at 2.5 A resolution. J.Mol.Biol., 223, 1992
5KRT	HIV-1 Integrase Catalytic Core Domain (CCD) in Complex with a Fragment-Derived Allosteric Inhibitor 分子名称: 3-[2,5-bis(chloranyl)pyrrol-1-yl]thiophene-2-carboxylic acid, Integrase 著者 Patel, D, Bauman, J.D, Arnold, E. 登録日 2016-07-07 公開日 2016-09-28 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (1.651 Å) 主引用文献 A New Class of Allosteric HIV-1 Integrase Inhibitors Identified by Crystallographic Fragment Screening of the Catalytic Core Domain. J.Biol.Chem., 291, 2016
1JAU	NMR Solution Structure of the Trp-Rich Peptide of HIV gp41 Bound to DPC Micelles 分子名称: TRANSMEMBRANE GLYCOPROTEIN (GP41) 著者 Schibli, D.J, Montelaro, R.C, Vogel, H.J. 登録日 2001-05-31 公開日 2001-10-17 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 The membrane-proximal tryptophan-rich region of the HIV glycoprotein, gp41, forms a well-defined helix in dodecylphosphocholine micelles. Biochemistry, 40, 2001
5MGD	STRUCTURE OF E298Q-BETA-GALACTOSIDASE FROM ASPERGILLUS NIGER IN COMPLEX WITH 6-Galactosyl-lactose 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 Rico-Diaz, A, Ramirez-Escudero, M, Vizoso Vazquez, A, Cerdan, M.E, Becerra, M, Sanz-Aparicio, J. 登録日 2016-11-21 公開日 2017-04-19 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural features of Aspergillus niger beta-galactosidase define its activity against glycoside linkages. FEBS J., 284, 2017
6VVR	Q0 fused 4-OT wild type symmetric trimer 分子名称: Tautomerase 著者 Medellin, B.P, Whitman, C.P, Zhang, Y.J. 登録日 2020-02-18 公開日 2020-04-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural Basis for the Asymmetry of a 4-Oxalocrotonate Tautomerase Trimer. Biochemistry, 59, 2020
6NYW	Structure of spastin AAA domain N527C mutant in complex with 8-fluoroquinazoline-based inhibitor 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, N-(5-tert-butyl-1H-pyrazol-3-yl)-8-fluoro-2-[(2R)-2-methylpiperazin-1-yl]quinazolin-4-amine, ... 著者 Pisa, R, Cupido, T, Kapoor, T.M. 登録日 2019-02-12 公開日 2019-03-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.189 Å) 主引用文献 Designing Allele-Specific Inhibitors of Spastin, a Microtubule-Severing AAA Protein. J. Am. Chem. Soc., 141, 2019

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